Cow genome map

Conread name: Ss1.1-rspc011_k9.5

Conread position: 69-736
Cow position:
Alignm length: 684
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 9

Conread position: 69-736
Cow position:
Alignm length: 688
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 80

Conread position: 71-488
Cow position:
Alignm length: 446
Alignm identity: 291
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 32, 148

Conread position: 74-731
Cow position:
Alignm length: 692
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 70

Conread position: 74-740
Cow position:
Alignm length: 704
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 331

Conread position: 77-729
Cow position:
Alignm length: 669
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 73

Conread position: 77-736
Cow position:
Alignm length: 679
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 71

Conread position: 78-508
Cow position:
Alignm length: 462
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 181

Conread position: 78-707
Cow position:
Alignm length: 647
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 125

Conread position: 78-724
Cow position:
Alignm length: 691
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 577

Conread position: 78-732
Cow position:
Alignm length: 672
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 72

Conread position: 78-736
Cow position:
Alignm length: 687
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 29

Conread position: 84-440
Cow position:
Alignm length: 369
Alignm identity: 259
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 215, 66

Conread position: 84-730
Cow position:
Alignm length: 669
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 57

Conread position: 91-609
Cow position:
Alignm length: 537
Alignm identity: 351
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 114, 59

Conread position: 98-801
Cow position:
Alignm length: 727
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 14

Conread position: 150-736
Cow position:
Alignm length: 609
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 480

Conread position: 151-305
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 151-424
Cow position:
Alignm length: 290
Alignm identity: 204
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 236

Conread position: 151-682
Cow position:
Alignm length: 552
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 113

Conread position: 151-732
Cow position:
Alignm length: 603
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 282

Conread position: 151-736
Cow position:
Alignm length: 606
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 471

Conread position: 151-736
Cow position:
Alignm length: 612
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 338

Conread position: 151-736
Cow position:
Alignm length: 600
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 339

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 151-736
Cow position:
Alignm length: 620
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 253

Conread position: 151-736
Cow position:
Alignm length: 605
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 246

Conread position: 151-736
Cow position:
Alignm length: 605
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 262

Conread position: 151-736
Cow position:
Alignm length: 605
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 461

Conread position: 151-736
Cow position:
Alignm length: 602
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 259

Conread position: 154-405
Cow position:
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 154-429
Cow position:
Alignm length: 292
Alignm identity: 199
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 72, 205

Conread position: 154-724
Cow position:
Alignm length: 584
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 84

Conread position: 154-728
Cow position:
Alignm length: 592
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 252

Conread position: 154-736
Cow position:
Alignm length: 597
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 87

Conread position: 154-736
Cow position:
Alignm length: 600
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 42

Conread position: 155-723
Cow position:
Alignm length: 589
Alignm identity: 369
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 9, 49

Conread position: 157-473
Cow position:
Alignm length: 331
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 157-736
Cow position:
Alignm length: 607
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 164-736
Cow position:
Alignm length: 592
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 164-736
Cow position:
Alignm length: 590
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 348

Conread position: 164-737
Cow position:
Alignm length: 595
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 375

Conread position: 219-405
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 219-736
Cow position:
Alignm length: 535
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 315

Conread position: 219-736
Cow position:
Alignm length: 534
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 371

Conread position: 250-736
Cow position:
Alignm length: 515
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 34

Conread position: 250-736
Cow position:
Alignm length: 499
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 206

Conread position: 299-711
Cow position:
Alignm length: 418
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 36

Conread position: 301-736
Cow position:
Alignm length: 438
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 208

Conread position: 301-736
Cow position:
Alignm length: 456
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 302-736
Cow position:
Alignm length: 439
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 305

Conread position: 303-729
Cow position:
Alignm length: 430
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 93

Conread position: 314-740
Cow position:
Alignm length: 429
Alignm identity: 279
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 212, 13

Conread position: 316-813
Cow position:
Alignm length: 511
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 46

Conread position: 317-713
Cow position:
Alignm length: 402
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 193

Conread position: 335-737
Cow position:
Alignm length: 411
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 31

Conread position: 371-736
Cow position:
Alignm length: 374
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 375-803
Cow position:
Alignm length: 437
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 68

Conread position: 393-815
Cow position:
Alignm length: 438
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 152

Conread position: 416-713
Cow position:
Alignm length: 306
Alignm identity: 200
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 186, 33

Conread position: 427-730
Cow position:
Alignm length: 307
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 137

Conread position: 435-728
Cow position:
Alignm length: 294
Alignm identity: 194
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 444-714
Cow position:
Alignm length: 279
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 453-736
Cow position:
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 160

Conread position: 455-736
Cow position:
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 154

Conread position: 476-784
Cow position:
Alignm length: 310
Alignm identity: 201
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 145, 22

Conread position: 524-729
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 532-813
Cow position:
Alignm length: 294
Alignm identity: 213
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 89, 122

Conread position: 538-736
Cow position:
Alignm length: 200
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 39

Conread position: 554-813
Cow position:
Alignm length: 263
Alignm identity: 189
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 158, 62

Conread position: 555-736
Cow position:
Alignm length: 183
Alignm identity: 149
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 66, 57

Conread position: 568-736
Cow position:
Alignm length: 171
Alignm identity: 139
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 126, 0

Show alignments to all cow chromosomes.