Cow genome map


           Conread name:
           Ss1.1-rspc011_k9.5
        

               Conread position:
               68-813
               

               Cow position:
               
               

               Alignm length:
               773
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 326
               

               Conread position:
               69-736
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 28
               

               Conread position:
               69-736
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 9
               

               Conread position:
               74-440
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               22, 39
               

               Conread position:
               75-638
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 331
               

               Conread position:
               75-804
               

               Cow position:
               
               

               Alignm length:
               769
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 173
               

               Conread position:
               77-593
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 58
               

               Conread position:
               78-521
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 59
               

               Conread position:
               78-637
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 24
               

               Conread position:
               78-640
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               370
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               63, 51
               

               Conread position:
               78-736
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 196
               

               Conread position:
               78-736
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 178
               

               Conread position:
               78-736
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 564
               

               Conread position:
               78-740
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 53
               

               Conread position:
               79-813
               

               Cow position:
               
               

               Alignm length:
               764
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 73
               

               Conread position:
               80-811
               

               Cow position:
               
               

               Alignm length:
               766
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 52
               

               Conread position:
               81-813
               

               Cow position:
               
               

               Alignm length:
               771
               

               Alignm identity:
               550
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 116
               

               Conread position:
               88-736
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 62
               

               Conread position:
               94-346
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               56, 49
               

               Conread position:
               97-736
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 25
               

               Conread position:
               99-640
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 52
               

               Conread position:
               112-824
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 97
               

               Conread position:
               136-736
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               150-457
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               150-736
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 482
               

               Conread position:
               150-760
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 480
               

               Conread position:
               151-297
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               151-736
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 361
               

               Conread position:
               151-736
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               154-305
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               154-344
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               111, 80
               

               Conread position:
               154-417
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               62, 115
               

               Conread position:
               154-524
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 202
               

               Conread position:
               154-656
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 254
               

               Conread position:
               154-680
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 137
               

               Conread position:
               154-736
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 485
               

               Conread position:
               154-736
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 196
               

               Conread position:
               154-813
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 129
               

               Conread position:
               154-817
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               456
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               54, 47
               

               Conread position:
               157-594
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               295
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               50, 43
               

               Conread position:
               157-736
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 54
               

               Conread position:
               159-815
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 27
               

               Conread position:
               164-577
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 245
               

               Conread position:
               164-584
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 79
               

               Conread position:
               164-736
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 464
               

               Conread position:
               164-736
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 463
               

               Conread position:
               164-736
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 386
               

               Conread position:
               164-736
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 79
               

               Conread position:
               164-736
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 420
               

               Conread position:
               164-736
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 74
               

               Conread position:
               167-579
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 369
               

               Conread position:
               207-732
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 34
               

               Conread position:
               250-736
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               289-549
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               300-733
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               292
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               257, 90
               

               Conread position:
               301-711
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               301-736
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 208
               

               Conread position:
               301-736
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 442
               

               Conread position:
               301-736
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 209
               

               Conread position:
               303-733
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 80
               

               Conread position:
               316-633
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 62
               

               Conread position:
               319-565
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               12, 167
               

               Conread position:
               324-635
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 47
               

               Conread position:
               337-739
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 237
               

               Conread position:
               365-739
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 168
               

               Conread position:
               404-736
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 22
               

               Conread position:
               471-736
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               474-721
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               137, 37
               

               Conread position:
               479-813
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               30, 132
               

               Conread position:
               481-813
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               239
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               132, 40
               

               Conread position:
               487-813
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               96, 20
               

               Conread position:
               499-711
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               122, 77
               

               Conread position:
               531-721
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               557-737
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               68, 116
               

               Conread position:
               566-736
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               55, 39
               

               Conread position:
               570-736
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               51, 42
               

               Conread position:
               578-732
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               43, 34
               
Show alignments to all cow chromosomes.