Cow genome map
| Conread name: | Ss1.1-rspc011_k9.5 |
| Conread position: | 69-736 |
| Cow position: | chr26:9563746-9563065 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 72-736 |
| Cow position: | chr26:17397321-17396638 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 78-736 |
| Cow position: | chr26:2198247-2198919 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 65 |
| Conread position: | 78-736 |
| Cow position: | chr26:12574774-12574116 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 71 |
| Conread position: | 81-732 |
| Cow position: | chr26:3691427-3692083 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 26 |
| Conread position: | 87-461 |
| Cow position: | chr26:23605278-23604882 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 281 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 139, 63 |
| Conread position: | 103-640 |
| Cow position: | chr26:11301446-11301985 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 353 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 96, 33 |
| Conread position: | 132-732 |
| Cow position: | chr26:11254389-11253767 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 21 |
| Conread position: | 148-317 |
| Cow position: | chr26:9846448-9846272 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 150-736 |
| Cow position: | chr26:15145070-15144467 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 200 |
| Conread position: | 151-636 |
| Cow position: | chr26:20254766-20255247 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 109 |
| Conread position: | 151-736 |
| Cow position: | chr26:5674858-5675452 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 193 |
| Conread position: | 151-736 |
| Cow position: | chr26:19351822-19351221 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 261 |
| Conread position: | 152-722 |
| Cow position: | chr26:8283352-8282784 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 73 |
| Conread position: | 152-732 |
| Cow position: | chr26:4605491-4604899 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 105 |
| Conread position: | 152-736 |
| Cow position: | chr26:30782458-30783036 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 161 |
| Conread position: | 157-490 |
| Cow position: | chr26:6850477-6850127 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 274 |
| Conread position: | 164-442 |
| Cow position: | chr26:9112170-9112464 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 164-735 |
| Cow position: | chr26:2352647-2352068 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 79 |
| Conread position: | 164-736 |
| Cow position: | chr26:3031105-3030536 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 115 |
| Conread position: | 164-736 |
| Cow position: | chr26:8869581-8870175 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 272 |
| Conread position: | 164-736 |
| Cow position: | chr26:12588857-12588272 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 552 |
| Conread position: | 164-736 |
| Cow position: | chr26:18854799-18855381 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 79 |
| Conread position: | 169-560 |
| Cow position: | chr26:11537123-11536719 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 11 |
| Conread position: | 173-679 |
| Cow position: | chr26:16904495-16905011 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 355 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 28, 61 |
| Conread position: | 250-736 |
| Cow position: | chr26:30589575-30589079 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 106 |
| Conread position: | 299-520 |
| Cow position: | chr26:9845757-9845537 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 60, 64 |
| Conread position: | 301-462 |
| Cow position: | chr26:12659833-12659670 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 301-740 |
| Cow position: | chr26:12656152-12656570 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 13 |
| Conread position: | 310-815 |
| Cow position: | chr26:20262726-20263211 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 87 |
| Conread position: | 327-528 |
| Cow position: | chr26:21350259-21350462 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 121, 63 |
| Conread position: | 408-736 |
| Cow position: | chr26:8918814-8919143 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 98 |
| Conread position: | 433-813 |
| Cow position: | chr26:12666095-12666481 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 261 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 70, 230 |
| Conread position: | 435-813 |
| Cow position: | chr26:9845584-9845213 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 60 |
| Conread position: | 438-736 |
| Cow position: | chr26:18852215-18852512 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 171 |
| Conread position: | 456-729 |
| Cow position: | chr26:23603753-23603481 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 96 |
| Conread position: | 468-813 |
| Cow position: | chr26:9849898-9849546 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 11 |
| Conread position: | 468-813 |
| Cow position: | chr26:9853408-9853057 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 11 |
| Conread position: | 470-736 |
| Cow position: | chr26:9112765-9113031 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 479-696 |
| Cow position: | chr26:4334181-4334398 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 142, 130 |
| Conread position: | 484-732 |
| Cow position: | chr26:6849395-6849148 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
Show alignments to all cow chromosomes.