Cow genome map
Conread name: | Ss1.1-rspc011_k9.5 |
Conread position: | 78-553 |
Cow position: | chr27:25999508-25999020 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 28 |
Conread position: | 78-736 |
Cow position: | chr27:9993653-9992973 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 490 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 105 |
Conread position: | 84-736 |
Cow position: | chr27:16438899-16439558 (view UCSC Genome Browser custom track) |
Alignm length: | 669 |
Alignm identity: | 487 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 66 |
Conread position: | 84-736 |
Cow position: | chr27:27051229-27051914 (view UCSC Genome Browser custom track) |
Alignm length: | 697 |
Alignm identity: | 492 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 38 |
Conread position: | 148-736 |
Cow position: | chr27:892837-893437 (view UCSC Genome Browser custom track) |
Alignm length: | 604 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 343 |
Conread position: | 151-732 |
Cow position: | chr27:14460828-14460230 (view UCSC Genome Browser custom track) |
Alignm length: | 600 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 133 |
Conread position: | 151-732 |
Cow position: | chr27:26324442-26325041 (view UCSC Genome Browser custom track) |
Alignm length: | 601 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 344 |
Conread position: | 151-736 |
Cow position: | chr27:1208980-1209581 (view UCSC Genome Browser custom track) |
Alignm length: | 603 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 463 |
Conread position: | 151-736 |
Cow position: | chr27:27662522-27663125 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 542 |
Conread position: | 151-737 |
Cow position: | chr27:23334791-23335410 (view UCSC Genome Browser custom track) |
Alignm length: | 622 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 261 |
Conread position: | 152-736 |
Cow position: | chr27:25805251-25804666 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 34 |
Conread position: | 153-551 |
Cow position: | chr27:3996738-3996330 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 274 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 147, 47 |
Conread position: | 154-410 |
Cow position: | chr27:25116884-25117146 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 182 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 147, 84 |
Conread position: | 154-736 |
Cow position: | chr27:15278434-15277843 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 260 |
Conread position: | 154-736 |
Cow position: | chr27:25002902-25002306 (view UCSC Genome Browser custom track) |
Alignm length: | 603 |
Alignm identity: | 447 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 331 |
Conread position: | 154-813 |
Cow position: | chr27:26556344-26555689 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 503 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 116 |
Conread position: | 157-636 |
Cow position: | chr27:28890367-28890855 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 314 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 33, 28 |
Conread position: | 157-736 |
Cow position: | chr27:5910501-5911093 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 115 |
Conread position: | 164-729 |
Cow position: | chr27:2364392-2364974 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 270 |
Conread position: | 164-736 |
Cow position: | chr27:15540969-15541559 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 463 |
Conread position: | 164-736 |
Cow position: | chr27:16034751-16034164 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 91 |
Conread position: | 228-740 |
Cow position: | chr27:26227009-26227522 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 102 |
Conread position: | 268-815 |
Cow position: | chr27:6006775-6007323 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 372 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 38, 135 |
Conread position: | 299-722 |
Cow position: | chr27:6013229-6013644 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 274 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 11, 17 |
Conread position: | 300-658 |
Cow position: | chr27:25160482-25160845 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 228 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 10, 15 |
Conread position: | 341-488 |
Cow position: | chr27:8561422-8561574 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 116 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 366-825 |
Cow position: | chr27:22316443-22316912 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 296 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 83, 5 |
Conread position: | 378-736 |
Cow position: | chr27:16432295-16432646 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 380-736 |
Cow position: | chr27:27753324-27752966 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 417-737 |
Cow position: | chr27:29565465-29565146 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 203 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 37, 52 |
Conread position: | 427-811 |
Cow position: | chr27:26035136-26034747 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 250 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 18, 269 |
Conread position: | 438-727 |
Cow position: | chr27:27197437-27197164 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 205 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 94, 80 |
Conread position: | 444-736 |
Cow position: | chr27:15638417-15638127 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 0 |
Conread position: | 532-813 |
Cow position: | chr27:8561572-8561859 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 205 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 194, 38 |
Conread position: | 591-736 |
Cow position: | chr27:28078533-28078677 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 109 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 34, 63 |
Show alignments to all cow chromosomes.