Cow genome map

Conread name: Ss1.1-rspc011_k9.5

Conread position: 68-736
Cow position:
Alignm length: 689
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 10

Conread position: 69-724
Cow position:
Alignm length: 674
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 81

Conread position: 69-732
Cow position:
Alignm length: 684
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 28

Conread position: 69-736
Cow position:
Alignm length: 686
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 28

Conread position: 69-736
Cow position:
Alignm length: 679
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 18

Conread position: 69-736
Cow position:
Alignm length: 692
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 9

Conread position: 72-824
Cow position:
Alignm length: 791
Alignm identity: 489
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 16, 236

Conread position: 74-646
Cow position:
Alignm length: 594
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 124

Conread position: 75-491
Cow position:
Alignm length: 434
Alignm identity: 283
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 82, 44

Conread position: 78-369
Cow position:
Alignm length: 315
Alignm identity: 229
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 89, 22

Conread position: 78-473
Cow position:
Alignm length: 425
Alignm identity: 288
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 57, 141

Conread position: 78-512
Cow position:
Alignm length: 456
Alignm identity: 301
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 13

Conread position: 78-717
Cow position:
Alignm length: 672
Alignm identity: 424
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 89, 22

Conread position: 78-732
Cow position:
Alignm length: 666
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 71

Conread position: 78-735
Cow position:
Alignm length: 687
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 312

Conread position: 78-736
Cow position:
Alignm length: 680
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 51

Conread position: 78-736
Cow position:
Alignm length: 678
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 53

Conread position: 78-736
Cow position:
Alignm length: 685
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 71

Conread position: 78-736
Cow position:
Alignm length: 681
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 62

Conread position: 78-736
Cow position:
Alignm length: 691
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 449

Conread position: 78-736
Cow position:
Alignm length: 671
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 72

Conread position: 80-590
Cow position:
Alignm length: 523
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 135

Conread position: 80-732
Cow position:
Alignm length: 673
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 28

Conread position: 80-732
Cow position:
Alignm length: 675
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 26

Conread position: 80-736
Cow position:
Alignm length: 680
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 35

Conread position: 80-736
Cow position:
Alignm length: 679
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 41

Conread position: 80-811
Cow position:
Alignm length: 764
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 307

Conread position: 81-730
Cow position:
Alignm length: 666
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 28

Conread position: 84-813
Cow position:
Alignm length: 776
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 368

Conread position: 87-386
Cow position:
Alignm length: 318
Alignm identity: 228
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 139, 63

Conread position: 87-736
Cow position:
Alignm length: 666
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 58

Conread position: 88-439
Cow position:
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 43

Conread position: 88-440
Cow position:
Alignm length: 368
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 43

Conread position: 90-736
Cow position:
Alignm length: 680
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 87

Conread position: 97-322
Cow position:
Alignm length: 246
Alignm identity: 173
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 56, 222

Conread position: 99-736
Cow position:
Alignm length: 657
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 32

Conread position: 102-722
Cow position:
Alignm length: 656
Alignm identity: 418
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 65, 41

Conread position: 107-732
Cow position:
Alignm length: 631
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 35

Conread position: 148-739
Cow position:
Alignm length: 611
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 388

Conread position: 150-463
Cow position:
Alignm length: 328
Alignm identity: 231
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 222

Conread position: 150-722
Cow position:
Alignm length: 590
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 96

Conread position: 150-736
Cow position:
Alignm length: 605
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 228

Conread position: 151-388
Cow position:
Alignm length: 254
Alignm identity: 183
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 68, 0

Conread position: 151-436
Cow position:
Alignm length: 305
Alignm identity: 209
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 151-553
Cow position:
Alignm length: 428
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 318

Conread position: 151-722
Cow position:
Alignm length: 592
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 507

Conread position: 151-732
Cow position:
Alignm length: 597
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 240

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 126

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 561

Conread position: 151-736
Cow position:
Alignm length: 601
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 104

Conread position: 151-736
Cow position:
Alignm length: 599
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 222

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 261

Conread position: 152-636
Cow position:
Alignm length: 507
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 478

Conread position: 152-732
Cow position:
Alignm length: 600
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 12

Conread position: 152-736
Cow position:
Alignm length: 606
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 97

Conread position: 152-736
Cow position:
Alignm length: 598
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 91

Conread position: 152-736
Cow position:
Alignm length: 608
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 54

Conread position: 154-614
Cow position:
Alignm length: 489
Alignm identity: 313
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 89

Conread position: 154-722
Cow position:
Alignm length: 595
Alignm identity: 386
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 53, 128

Conread position: 154-728
Cow position:
Alignm length: 581
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 62

Conread position: 154-732
Cow position:
Alignm length: 586
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 19

Conread position: 154-735
Cow position:
Alignm length: 601
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 252

Conread position: 154-736
Cow position:
Alignm length: 602
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 154-736
Cow position:
Alignm length: 601
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 319

Conread position: 154-736
Cow position:
Alignm length: 601
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 248

Conread position: 154-736
Cow position:
Alignm length: 591
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 177

Conread position: 154-758
Cow position:
Alignm length: 620
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 348

Conread position: 157-736
Cow position:
Alignm length: 597
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 471

Conread position: 158-388
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 141, 30

Conread position: 158-472
Cow position:
Alignm length: 333
Alignm identity: 215
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 44

Conread position: 158-570
Cow position:
Alignm length: 430
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 231

Conread position: 158-730
Cow position:
Alignm length: 591
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 159-722
Cow position:
Alignm length: 587
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 236

Conread position: 162-736
Cow position:
Alignm length: 594
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 8

Conread position: 164-440
Cow position:
Alignm length: 293
Alignm identity: 211
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 39, 0

Conread position: 164-572
Cow position:
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 164-601
Cow position:
Alignm length: 453
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 164-696
Cow position:
Alignm length: 550
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 35

Conread position: 164-736
Cow position:
Alignm length: 592
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 318

Conread position: 164-736
Cow position:
Alignm length: 592
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 463

Conread position: 164-736
Cow position:
Alignm length: 595
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 82

Conread position: 164-736
Cow position:
Alignm length: 587
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 35

Conread position: 164-736
Cow position:
Alignm length: 593
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 19

Conread position: 165-732
Cow position:
Alignm length: 588
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 21

Conread position: 165-813
Cow position:
Alignm length: 679
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 210

Conread position: 179-609
Cow position:
Alignm length: 435
Alignm identity: 272
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 129

Conread position: 192-813
Cow position:
Alignm length: 655
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 42

Conread position: 194-522
Cow position:
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 57

Conread position: 207-736
Cow position:
Alignm length: 545
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 34

Conread position: 219-736
Cow position:
Alignm length: 536
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 30

Conread position: 223-623
Cow position:
Alignm length: 411
Alignm identity: 273
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 5, 152

Conread position: 223-736
Cow position:
Alignm length: 525
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 20

Conread position: 234-638
Cow position:
Alignm length: 416
Alignm identity: 271
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 63, 164

Conread position: 236-722
Cow position:
Alignm length: 500
Alignm identity: 318
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 61, 178

Conread position: 249-596
Cow position:
Alignm length: 356
Alignm identity: 232
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 58, 202

Conread position: 250-657
Cow position:
Alignm length: 423
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 154

Conread position: 252-736
Cow position:
Alignm length: 500
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 253

Conread position: 253-736
Cow position:
Alignm length: 495
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 117

Conread position: 253-813
Cow position:
Alignm length: 574
Alignm identity: 366
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 53, 82

Conread position: 287-811
Cow position:
Alignm length: 539
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 5

Conread position: 299-713
Cow position:
Alignm length: 417
Alignm identity: 267
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 146, 26

Conread position: 299-723
Cow position:
Alignm length: 433
Alignm identity: 276
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 46, 61

Conread position: 299-740
Cow position:
Alignm length: 449
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 67

Conread position: 300-595
Cow position:
Alignm length: 306
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 6

Conread position: 301-659
Cow position:
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 312

Conread position: 301-736
Cow position:
Alignm length: 439
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 302-821
Cow position:
Alignm length: 535
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 68

Conread position: 303-525
Cow position:
Alignm length: 225
Alignm identity: 130
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 126, 0

Conread position: 305-723
Cow position:
Alignm length: 424
Alignm identity: 270
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 11

Conread position: 309-813
Cow position:
Alignm length: 521
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 14

Conread position: 358-687
Cow position:
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 256

Conread position: 366-824
Cow position:
Alignm length: 474
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 30

Conread position: 374-677
Cow position:
Alignm length: 307
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 131

Conread position: 412-682
Cow position:
Alignm length: 276
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 87, 124

Conread position: 429-812
Cow position:
Alignm length: 388
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 322

Conread position: 435-635
Cow position:
Alignm length: 202
Alignm identity: 161
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 186, 100

Conread position: 435-705
Cow position:
Alignm length: 271
Alignm identity: 176
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 68, 0

Conread position: 438-730
Cow position:
Alignm length: 293
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 0

Conread position: 449-713
Cow position:
Alignm length: 265
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 454-638
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 124

Conread position: 458-633
Cow position:
Alignm length: 179
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 15

Conread position: 470-740
Cow position:
Alignm length: 273
Alignm identity: 194
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 151, 32

Conread position: 471-736
Cow position:
Alignm length: 267
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 126

Conread position: 473-736
Cow position:
Alignm length: 266
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 137

Conread position: 478-740
Cow position:
Alignm length: 268
Alignm identity: 188
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 141, 10

Conread position: 495-813
Cow position:
Alignm length: 331
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 52

Conread position: 524-735
Cow position:
Alignm length: 212
Alignm identity: 163
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 89, 0

Conread position: 535-724
Cow position:
Alignm length: 191
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 77

Conread position: 538-736
Cow position:
Alignm length: 200
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 83, 74

Conread position: 562-732
Cow position:
Alignm length: 171
Alignm identity: 137
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 50, 0

Conread position: 564-736
Cow position:
Alignm length: 174
Alignm identity: 142
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 57, 27

Conread position: 567-736
Cow position:
Alignm length: 171
Alignm identity: 138
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 148, 0

Conread position: 576-736
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 85, 92

Conread position: 590-736
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 22

Conread position: 592-736
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 597-813
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 105, 71

Conread position: 610-730
Cow position:
Alignm length: 126
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 614-813
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 124, 11

Conread position: 614-813
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 124, 11

Show alignments to all cow chromosomes.