Cow genome map

Conread name: Ss1.1-rspc011_k9.5

Conread position: 53-813
Cow position:
Alignm length: 782
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 45

Conread position: 69-534
Cow position:
Alignm length: 479
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 63

Conread position: 69-593
Cow position:
Alignm length: 549
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 9

Conread position: 69-711
Cow position:
Alignm length: 674
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 28

Conread position: 69-721
Cow position:
Alignm length: 701
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 284

Conread position: 69-736
Cow position:
Alignm length: 690
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 9

Conread position: 69-736
Cow position:
Alignm length: 679
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 9

Conread position: 74-740
Cow position:
Alignm length: 686
Alignm identity: 434
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 5, 18

Conread position: 75-717
Cow position:
Alignm length: 650
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 56

Conread position: 78-320
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 25

Conread position: 78-430
Cow position:
Alignm length: 376
Alignm identity: 256
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 86, 0

Conread position: 78-483
Cow position:
Alignm length: 424
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 66

Conread position: 78-623
Cow position:
Alignm length: 561
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 44

Conread position: 78-727
Cow position:
Alignm length: 673
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 65

Conread position: 78-735
Cow position:
Alignm length: 695
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 202

Conread position: 78-736
Cow position:
Alignm length: 687
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 620

Conread position: 78-736
Cow position:
Alignm length: 694
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 78-813
Cow position:
Alignm length: 787
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 157

Conread position: 79-695
Cow position:
Alignm length: 640
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 27

Conread position: 79-736
Cow position:
Alignm length: 682
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 38

Conread position: 79-736
Cow position:
Alignm length: 674
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 72

Conread position: 81-588
Cow position:
Alignm length: 524
Alignm identity: 342
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 100, 93

Conread position: 81-736
Cow position:
Alignm length: 670
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 51

Conread position: 82-812
Cow position:
Alignm length: 760
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 9

Conread position: 83-736
Cow position:
Alignm length: 674
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 69

Conread position: 84-490
Cow position:
Alignm length: 432
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 14

Conread position: 87-491
Cow position:
Alignm length: 438
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 177

Conread position: 87-736
Cow position:
Alignm length: 672
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 30

Conread position: 88-451
Cow position:
Alignm length: 375
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 55

Conread position: 102-616
Cow position:
Alignm length: 534
Alignm identity: 321
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 103

Conread position: 102-736
Cow position:
Alignm length: 678
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 48

Conread position: 108-802
Cow position:
Alignm length: 713
Alignm identity: 441
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 99, 35

Conread position: 143-736
Cow position:
Alignm length: 623
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 238

Conread position: 147-708
Cow position:
Alignm length: 579
Alignm identity: 351
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 38

Conread position: 148-435
Cow position:
Alignm length: 306
Alignm identity: 208
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 194

Conread position: 148-435
Cow position:
Alignm length: 306
Alignm identity: 214
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 11, 0

Conread position: 148-479
Cow position:
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 34

Conread position: 148-732
Cow position:
Alignm length: 606
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 328

Conread position: 148-735
Cow position:
Alignm length: 614
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 408

Conread position: 148-736
Cow position:
Alignm length: 605
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 150-459
Cow position:
Alignm length: 328
Alignm identity: 237
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 14, 56

Conread position: 150-736
Cow position:
Alignm length: 603
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 98

Conread position: 151-310
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 151-335
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 151-489
Cow position:
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 151-719
Cow position:
Alignm length: 596
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 151-732
Cow position:
Alignm length: 600
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 151-736
Cow position:
Alignm length: 607
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 264

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 56

Conread position: 151-736
Cow position:
Alignm length: 610
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 247

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 343

Conread position: 151-736
Cow position:
Alignm length: 606
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 107

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 144

Conread position: 151-736
Cow position:
Alignm length: 601
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 187

Conread position: 151-736
Cow position:
Alignm length: 602
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 187

Conread position: 151-736
Cow position:
Alignm length: 600
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 142

Conread position: 151-736
Cow position:
Alignm length: 599
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 152-693
Cow position:
Alignm length: 561
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 478

Conread position: 152-736
Cow position:
Alignm length: 591
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 123

Conread position: 152-736
Cow position:
Alignm length: 606
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 208

Conread position: 152-754
Cow position:
Alignm length: 627
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 374

Conread position: 154-468
Cow position:
Alignm length: 326
Alignm identity: 212
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 150, 47

Conread position: 154-480
Cow position:
Alignm length: 342
Alignm identity: 223
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 40, 50

Conread position: 154-595
Cow position:
Alignm length: 465
Alignm identity: 295
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 81, 357

Conread position: 154-616
Cow position:
Alignm length: 480
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 116

Conread position: 154-720
Cow position:
Alignm length: 586
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 107

Conread position: 154-736
Cow position:
Alignm length: 600
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 218

Conread position: 154-736
Cow position:
Alignm length: 599
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 215

Conread position: 154-736
Cow position:
Alignm length: 598
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 46

Conread position: 157-459
Cow position:
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 181

Conread position: 157-490
Cow position:
Alignm length: 347
Alignm identity: 241
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 94, 78

Conread position: 158-669
Cow position:
Alignm length: 523
Alignm identity: 344
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 52, 43

Conread position: 159-800
Cow position:
Alignm length: 657
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 46

Conread position: 159-811
Cow position:
Alignm length: 661
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 59

Conread position: 160-740
Cow position:
Alignm length: 605
Alignm identity: 385
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 39, 48

Conread position: 163-740
Cow position:
Alignm length: 600
Alignm identity: 387
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 21, 39

Conread position: 164-453
Cow position:
Alignm length: 304
Alignm identity: 216
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 136, 79

Conread position: 164-524
Cow position:
Alignm length: 379
Alignm identity: 230
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 61, 46

Conread position: 164-732
Cow position:
Alignm length: 584
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 80

Conread position: 164-732
Cow position:
Alignm length: 592
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 182

Conread position: 164-736
Cow position:
Alignm length: 587
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 79

Conread position: 164-736
Cow position:
Alignm length: 591
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 372

Conread position: 164-736
Cow position:
Alignm length: 590
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 225

Conread position: 164-736
Cow position:
Alignm length: 593
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 164-736
Cow position:
Alignm length: 596
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 83

Conread position: 164-736
Cow position:
Alignm length: 597
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 267

Conread position: 164-736
Cow position:
Alignm length: 592
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 412

Conread position: 164-736
Cow position:
Alignm length: 590
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 181

Conread position: 164-736
Cow position:
Alignm length: 601
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 165-721
Cow position:
Alignm length: 573
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 364

Conread position: 166-736
Cow position:
Alignm length: 582
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 77

Conread position: 166-736
Cow position:
Alignm length: 590
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 5

Conread position: 167-736
Cow position:
Alignm length: 595
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 469

Conread position: 207-595
Cow position:
Alignm length: 402
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 144

Conread position: 219-714
Cow position:
Alignm length: 513
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 16

Conread position: 220-813
Cow position:
Alignm length: 623
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 368

Conread position: 234-721
Cow position:
Alignm length: 505
Alignm identity: 323
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 64, 19

Conread position: 250-582
Cow position:
Alignm length: 336
Alignm identity: 225
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 195, 57

Conread position: 250-736
Cow position:
Alignm length: 500
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 272

Conread position: 258-701
Cow position:
Alignm length: 457
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 265

Conread position: 274-660
Cow position:
Alignm length: 413
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 70

Conread position: 277-714
Cow position:
Alignm length: 450
Alignm identity: 276
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 44

Conread position: 278-721
Cow position:
Alignm length: 468
Alignm identity: 315
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 194

Conread position: 299-710
Cow position:
Alignm length: 415
Alignm identity: 268
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 64, 50

Conread position: 299-785
Cow position:
Alignm length: 492
Alignm identity: 303
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 140, 167

Conread position: 300-736
Cow position:
Alignm length: 439
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 145

Conread position: 300-809
Cow position:
Alignm length: 524
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 124

Conread position: 301-736
Cow position:
Alignm length: 438
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 301-736
Cow position:
Alignm length: 437
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 137

Conread position: 303-736
Cow position:
Alignm length: 437
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 176

Conread position: 304-736
Cow position:
Alignm length: 437
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 201

Conread position: 306-825
Cow position:
Alignm length: 532
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 13

Conread position: 321-440
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 325-813
Cow position:
Alignm length: 503
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 44

Conread position: 329-740
Cow position:
Alignm length: 421
Alignm identity: 277
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 286, 80

Conread position: 331-699
Cow position:
Alignm length: 372
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 25

Conread position: 336-736
Cow position:
Alignm length: 403
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 348-736
Cow position:
Alignm length: 391
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 41

Conread position: 350-736
Cow position:
Alignm length: 398
Alignm identity: 275
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 129, 74

Conread position: 403-736
Cow position:
Alignm length: 334
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 404-816
Cow position:
Alignm length: 421
Alignm identity: 268
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 74, 43

Conread position: 421-736
Cow position:
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 193

Conread position: 433-723
Cow position:
Alignm length: 295
Alignm identity: 193
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 33

Conread position: 435-732
Cow position:
Alignm length: 302
Alignm identity: 205
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 13, 233

Conread position: 444-736
Cow position:
Alignm length: 294
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 36

Conread position: 449-723
Cow position:
Alignm length: 277
Alignm identity: 189
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 114, 13

Conread position: 449-736
Cow position:
Alignm length: 289
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 113

Conread position: 450-736
Cow position:
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 456-677
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 165, 47

Conread position: 478-736
Cow position:
Alignm length: 264
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 495-710
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 23, 0

Conread position: 495-812
Cow position:
Alignm length: 329
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 81

Conread position: 497-631
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 113

Conread position: 536-730
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 48, 75

Conread position: 537-736
Cow position:
Alignm length: 201
Alignm identity: 155
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 84, 72

Conread position: 597-736
Cow position:
Alignm length: 141
Alignm identity: 117
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 27, 15

Conread position: 602-813
Cow position:
Alignm length: 223
Alignm identity: 172
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 138, 67

Conread position: 611-813
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 129, 144

Conread position: 629-732
Cow position:
Alignm length: 104
Alignm identity: 91
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.