Cow genome map
| Conread name: | Ss1.1-rspc011_k9.5 |
| Conread position: | 53-813 |
| Cow position: | chr6:7180161-7179408 (view UCSC Genome Browser custom track) |
| Alignm length: | 782 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 45 |
| Conread position: | 69-534 |
| Cow position: | chr6:1823728-1823254 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 63 |
| Conread position: | 69-593 |
| Cow position: | chr6:50497940-50497402 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 69-711 |
| Cow position: | chr6:21971195-21971860 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 69-721 |
| Cow position: | chr6:65900412-65899719 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 284 |
| Conread position: | 69-736 |
| Cow position: | chr6:15141660-15140981 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 9 |
| Conread position: | 69-736 |
| Cow position: | chr6:66231335-66231994 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 9 |
| Conread position: | 74-740 |
| Cow position: | chr6:525779-526439 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 434 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 5, 18 |
| Conread position: | 75-717 |
| Cow position: | chr6:48367934-48368555 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 56 |
| Conread position: | 78-320 |
| Cow position: | chr6:33459112-33459352 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 78-430 |
| Cow position: | chr6:12093346-12092971 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 256 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 78-483 |
| Cow position: | chr6:13978049-13978466 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 66 |
| Conread position: | 78-623 |
| Cow position: | chr6:68362787-68362236 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 44 |
| Conread position: | 78-727 |
| Cow position: | chr6:44151035-44150366 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 65 |
| Conread position: | 78-735 |
| Cow position: | chr6:30478606-30479297 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 202 |
| Conread position: | 78-736 |
| Cow position: | chr6:3488885-3488200 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 620 |
| Conread position: | 78-736 |
| Cow position: | chr6:36525552-36526245 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 78-813 |
| Cow position: | chr6:38231786-38232562 (view UCSC Genome Browser custom track) |
| Alignm length: | 787 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 157 |
| Conread position: | 79-695 |
| Cow position: | chr6:42926911-42927540 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 27 |
| Conread position: | 79-736 |
| Cow position: | chr6:30275656-30274980 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 38 |
| Conread position: | 79-736 |
| Cow position: | chr6:59919745-59919086 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 72 |
| Conread position: | 81-588 |
| Cow position: | chr6:2885755-2886259 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 342 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 100, 93 |
| Conread position: | 81-736 |
| Cow position: | chr6:19453463-19454114 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 51 |
| Conread position: | 82-812 |
| Cow position: | chr6:59741510-59740773 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 9 |
| Conread position: | 83-736 |
| Cow position: | chr6:65880397-65881066 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 69 |
| Conread position: | 84-490 |
| Cow position: | chr6:10054138-10054566 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 14 |
| Conread position: | 87-491 |
| Cow position: | chr6:6476934-6476500 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 177 |
| Conread position: | 87-736 |
| Cow position: | chr6:34893474-34892807 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 30 |
| Conread position: | 88-451 |
| Cow position: | chr6:65007383-65007748 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 55 |
| Conread position: | 102-616 |
| Cow position: | chr6:52115804-52116331 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 103 |
| Conread position: | 102-736 |
| Cow position: | chr6:33388371-33389040 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 48 |
| Conread position: | 108-802 |
| Cow position: | chr6:1384284-1383609 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 441 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 99, 35 |
| Conread position: | 143-736 |
| Cow position: | chr6:331887-331270 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 238 |
| Conread position: | 147-708 |
| Cow position: | chr6:57010256-57009691 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 351 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 8, 38 |
| Conread position: | 148-435 |
| Cow position: | chr6:64713140-64713438 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 11, 194 |
| Conread position: | 148-435 |
| Cow position: | chr6:64714707-64715012 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 148-479 |
| Cow position: | chr6:47043839-47043489 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 148-732 |
| Cow position: | chr6:55544736-55544132 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 328 |
| Conread position: | 148-735 |
| Cow position: | chr6:65841180-65841782 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 408 |
| Conread position: | 148-736 |
| Cow position: | chr6:35877123-35876519 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 150-459 |
| Cow position: | chr6:45671862-45672187 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 14, 56 |
| Conread position: | 150-736 |
| Cow position: | chr6:2374304-2374899 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 98 |
| Conread position: | 151-310 |
| Cow position: | chr6:51920-51757 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 151-335 |
| Cow position: | chr6:24238644-24238832 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 151-489 |
| Cow position: | chr6:39437240-39437593 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 151-719 |
| Cow position: | chr6:913229-913824 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 151-732 |
| Cow position: | chr6:3278354-3277755 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 151-736 |
| Cow position: | chr6:701550-702149 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 264 |
| Conread position: | 151-736 |
| Cow position: | chr6:5951639-5951047 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 56 |
| Conread position: | 151-736 |
| Cow position: | chr6:8201329-8201936 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 247 |
| Conread position: | 151-736 |
| Cow position: | chr6:8761704-8761106 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 343 |
| Conread position: | 151-736 |
| Cow position: | chr6:15280946-15280353 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 107 |
| Conread position: | 151-736 |
| Cow position: | chr6:20561512-20560913 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 144 |
| Conread position: | 151-736 |
| Cow position: | chr6:27468855-27469447 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 187 |
| Conread position: | 151-736 |
| Cow position: | chr6:27530402-27529808 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 187 |
| Conread position: | 151-736 |
| Cow position: | chr6:28274585-28275181 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 142 |
| Conread position: | 151-736 |
| Cow position: | chr6:29311092-29311690 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 152-693 |
| Cow position: | chr6:57870406-57869847 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 478 |
| Conread position: | 152-736 |
| Cow position: | chr6:10559043-10558461 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 123 |
| Conread position: | 152-736 |
| Cow position: | chr6:13103654-13104257 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 208 |
| Conread position: | 152-754 |
| Cow position: | chr6:11278098-11277481 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 374 |
| Conread position: | 154-468 |
| Cow position: | chr6:20496310-20496631 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 150, 47 |
| Conread position: | 154-480 |
| Cow position: | chr6:40314511-40314845 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 40, 50 |
| Conread position: | 154-595 |
| Cow position: | chr6:11353336-11353799 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 295 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 81, 357 |
| Conread position: | 154-616 |
| Cow position: | chr6:42723320-42722848 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 116 |
| Conread position: | 154-720 |
| Cow position: | chr6:28474309-28474885 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 107 |
| Conread position: | 154-736 |
| Cow position: | chr6:6566212-6566804 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 218 |
| Conread position: | 154-736 |
| Cow position: | chr6:17045663-17046254 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 215 |
| Conread position: | 154-736 |
| Cow position: | chr6:65927545-65928135 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 46 |
| Conread position: | 157-459 |
| Cow position: | chr6:21686498-21686810 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 181 |
| Conread position: | 157-490 |
| Cow position: | chr6:65909036-65909377 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 241 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 94, 78 |
| Conread position: | 158-669 |
| Cow position: | chr6:39161815-39162317 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 344 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 52, 43 |
| Conread position: | 159-800 |
| Cow position: | chr6:41552640-41553272 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 46 |
| Conread position: | 159-811 |
| Cow position: | chr6:35420956-35420327 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 59 |
| Conread position: | 160-740 |
| Cow position: | chr6:34203118-34203708 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 385 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 39, 48 |
| Conread position: | 163-740 |
| Cow position: | chr6:35433152-35433734 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 387 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 21, 39 |
| Conread position: | 164-453 |
| Cow position: | chr6:39907766-39908066 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 216 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 136, 79 |
| Conread position: | 164-524 |
| Cow position: | chr6:40274869-40275245 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 61, 46 |
| Conread position: | 164-732 |
| Cow position: | chr6:7141856-7141291 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 80 |
| Conread position: | 164-732 |
| Cow position: | chr6:34126961-34127548 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 182 |
| Conread position: | 164-736 |
| Cow position: | chr6:1405622-1405039 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 79 |
| Conread position: | 164-736 |
| Cow position: | chr6:2554317-2554905 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 372 |
| Conread position: | 164-736 |
| Cow position: | chr6:13943523-13944108 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 225 |
| Conread position: | 164-736 |
| Cow position: | chr6:17598672-17598080 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 164-736 |
| Cow position: | chr6:26671248-26670659 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 83 |
| Conread position: | 164-736 |
| Cow position: | chr6:27169186-27169780 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 267 |
| Conread position: | 164-736 |
| Cow position: | chr6:28491904-28491315 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 412 |
| Conread position: | 164-736 |
| Cow position: | chr6:58409298-58408713 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 181 |
| Conread position: | 164-736 |
| Cow position: | chr6:68026391-68026991 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 165-721 |
| Cow position: | chr6:44028661-44029227 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 364 |
| Conread position: | 166-736 |
| Cow position: | chr6:28062960-28063535 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 77 |
| Conread position: | 166-736 |
| Cow position: | chr6:43617328-43617914 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 5 |
| Conread position: | 167-736 |
| Cow position: | chr6:65822520-65821927 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 469 |
| Conread position: | 207-595 |
| Cow position: | chr6:10640786-10641184 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 144 |
| Conread position: | 219-714 |
| Cow position: | chr6:16672056-16672557 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 16 |
| Conread position: | 220-813 |
| Cow position: | chr6:37115806-37116420 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 368 |
| Conread position: | 234-721 |
| Cow position: | chr6:62396853-62397352 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 323 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 64, 19 |
| Conread position: | 250-582 |
| Cow position: | chr6:8019794-8020120 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 225 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 195, 57 |
| Conread position: | 250-736 |
| Cow position: | chr6:40554884-40554388 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 272 |
| Conread position: | 258-701 |
| Cow position: | chr6:13317776-13317325 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 265 |
| Conread position: | 274-660 |
| Cow position: | chr6:49520667-49520257 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 70 |
| Conread position: | 277-714 |
| Cow position: | chr6:14763489-14763053 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 44 |
| Conread position: | 278-721 |
| Cow position: | chr6:15476014-15476471 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 315 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 22, 194 |
| Conread position: | 299-710 |
| Cow position: | chr6:44524990-44524595 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 64, 50 |
| Conread position: | 299-785 |
| Cow position: | chr6:10630227-10630705 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 303 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 140, 167 |
| Conread position: | 300-736 |
| Cow position: | chr6:13846808-13847231 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 145 |
| Conread position: | 300-809 |
| Cow position: | chr6:1100825-1100306 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 124 |
| Conread position: | 301-736 |
| Cow position: | chr6:3889717-3889280 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 301-736 |
| Cow position: | chr6:16051649-16052079 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 137 |
| Conread position: | 303-736 |
| Cow position: | chr6:33459628-33460062 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 176 |
| Conread position: | 304-736 |
| Cow position: | chr6:13276568-13276999 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 201 |
| Conread position: | 306-825 |
| Cow position: | chr6:37642169-37642679 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 13 |
| Conread position: | 321-440 |
| Cow position: | chr6:28588629-28588510 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 325-813 |
| Cow position: | chr6:32330991-32330510 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 44 |
| Conread position: | 329-740 |
| Cow position: | chr6:11402843-11403248 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 286, 80 |
| Conread position: | 331-699 |
| Cow position: | chr6:43793965-43793606 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 336-736 |
| Cow position: | chr6:24238862-24239264 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 348-736 |
| Cow position: | chr6:25214078-25214457 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 41 |
| Conread position: | 350-736 |
| Cow position: | chr6:28106022-28105647 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 129, 74 |
| Conread position: | 403-736 |
| Cow position: | chr6:1412074-1411741 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 404-816 |
| Cow position: | chr6:51190378-51190782 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 74, 43 |
| Conread position: | 421-736 |
| Cow position: | chr6:7866869-7866552 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 193 |
| Conread position: | 433-723 |
| Cow position: | chr6:60170473-60170180 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 33 |
| Conread position: | 435-732 |
| Cow position: | chr6:33900727-33900427 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 13, 233 |
| Conread position: | 444-736 |
| Cow position: | chr6:3148912-3149203 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 36 |
| Conread position: | 449-723 |
| Cow position: | chr6:31568886-31568619 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 114, 13 |
| Conread position: | 449-736 |
| Cow position: | chr6:39908441-39908726 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 113 |
| Conread position: | 450-736 |
| Cow position: | chr6:64715143-64715428 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 456-677 |
| Cow position: | chr6:63198155-63197937 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 165, 47 |
| Conread position: | 478-736 |
| Cow position: | chr6:47043263-47043000 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 495-710 |
| Cow position: | chr6:40315015-40315226 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 495-812 |
| Cow position: | chr6:6476524-6476206 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 81 |
| Conread position: | 497-631 |
| Cow position: | chr6:65910746-65910881 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 113 |
| Conread position: | 536-730 |
| Cow position: | chr6:6155686-6155876 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 48, 75 |
| Conread position: | 537-736 |
| Cow position: | chr6:40251663-40251862 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 84, 72 |
| Conread position: | 597-736 |
| Cow position: | chr6:65007748-65007884 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 602-813 |
| Cow position: | chr6:10641225-10641445 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 138, 67 |
| Conread position: | 611-813 |
| Cow position: | chr6:43608284-43608076 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 129, 144 |
| Conread position: | 629-732 |
| Cow position: | chr6:9738792-9738895 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.