Cow genome map

Conread name: Ss1.1-rspc011_k9.5

Conread position: 68-736
Cow position:
Alignm length: 713
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 367

Conread position: 69-391
Cow position:
Alignm length: 346
Alignm identity: 237
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 9

Conread position: 69-416
Cow position:
Alignm length: 366
Alignm identity: 254
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 17, 28

Conread position: 69-736
Cow position:
Alignm length: 687
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 45

Conread position: 69-758
Cow position:
Alignm length: 716
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 28

Conread position: 72-502
Cow position:
Alignm length: 454
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 25

Conread position: 75-813
Cow position:
Alignm length: 772
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 31

Conread position: 76-736
Cow position:
Alignm length: 689
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 392

Conread position: 77-736
Cow position:
Alignm length: 693
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 30

Conread position: 78-366
Cow position:
Alignm length: 309
Alignm identity: 215
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 125, 53

Conread position: 78-369
Cow position:
Alignm length: 297
Alignm identity: 197
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 148, 53

Conread position: 78-633
Cow position:
Alignm length: 573
Alignm identity: 352
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 92

Conread position: 78-659
Cow position:
Alignm length: 613
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 34

Conread position: 78-697
Cow position:
Alignm length: 640
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 16

Conread position: 78-721
Cow position:
Alignm length: 675
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 414

Conread position: 78-732
Cow position:
Alignm length: 693
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 571

Conread position: 78-736
Cow position:
Alignm length: 694
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 534

Conread position: 78-736
Cow position:
Alignm length: 681
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 28

Conread position: 78-811
Cow position:
Alignm length: 765
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 72

Conread position: 79-438
Cow position:
Alignm length: 375
Alignm identity: 248
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 173

Conread position: 79-736
Cow position:
Alignm length: 694
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 342

Conread position: 80-501
Cow position:
Alignm length: 444
Alignm identity: 289
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 9, 25

Conread position: 80-526
Cow position:
Alignm length: 463
Alignm identity: 312
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 48, 159

Conread position: 80-670
Cow position:
Alignm length: 624
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 290

Conread position: 80-824
Cow position:
Alignm length: 781
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 106

Conread position: 81-696
Cow position:
Alignm length: 638
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 70

Conread position: 81-736
Cow position:
Alignm length: 665
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 70

Conread position: 85-736
Cow position:
Alignm length: 682
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 65

Conread position: 88-328
Cow position:
Alignm length: 247
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 152, 56

Conread position: 98-736
Cow position:
Alignm length: 660
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 380

Conread position: 104-821
Cow position:
Alignm length: 753
Alignm identity: 471
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 47, 24

Conread position: 109-736
Cow position:
Alignm length: 651
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 149

Conread position: 109-736
Cow position:
Alignm length: 647
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 414

Conread position: 148-736
Cow position:
Alignm length: 609
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 216

Conread position: 148-740
Cow position:
Alignm length: 613
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 13

Conread position: 151-435
Cow position:
Alignm length: 301
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 68, 190

Conread position: 151-504
Cow position:
Alignm length: 371
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 21

Conread position: 151-704
Cow position:
Alignm length: 572
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 322

Conread position: 151-729
Cow position:
Alignm length: 593
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 75

Conread position: 151-736
Cow position:
Alignm length: 603
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 52

Conread position: 151-736
Cow position:
Alignm length: 602
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 66

Conread position: 151-736
Cow position:
Alignm length: 606
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 151-736
Cow position:
Alignm length: 603
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 310

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 322

Conread position: 151-736
Cow position:
Alignm length: 605
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 220

Conread position: 151-736
Cow position:
Alignm length: 602
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 67

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 46

Conread position: 151-740
Cow position:
Alignm length: 607
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 243

Conread position: 152-511
Cow position:
Alignm length: 380
Alignm identity: 265
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 10, 97

Conread position: 152-736
Cow position:
Alignm length: 614
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 48

Conread position: 152-736
Cow position:
Alignm length: 604
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 351

Conread position: 152-736
Cow position:
Alignm length: 601
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 96

Conread position: 153-724
Cow position:
Alignm length: 595
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 387

Conread position: 154-479
Cow position:
Alignm length: 330
Alignm identity: 228
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 150, 86

Conread position: 154-490
Cow position:
Alignm length: 353
Alignm identity: 250
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 71, 209

Conread position: 154-682
Cow position:
Alignm length: 545
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 73

Conread position: 154-727
Cow position:
Alignm length: 592
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 99

Conread position: 154-736
Cow position:
Alignm length: 605
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 476

Conread position: 154-736
Cow position:
Alignm length: 600
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 154-736
Cow position:
Alignm length: 601
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 412

Conread position: 154-761
Cow position:
Alignm length: 625
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 379

Conread position: 154-812
Cow position:
Alignm length: 683
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 28

Conread position: 154-813
Cow position:
Alignm length: 685
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 142

Conread position: 154-813
Cow position:
Alignm length: 693
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 58

Conread position: 154-821
Cow position:
Alignm length: 696
Alignm identity: 431
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 47, 79

Conread position: 157-474
Cow position:
Alignm length: 334
Alignm identity: 238
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 62, 270

Conread position: 157-736
Cow position:
Alignm length: 610
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 124

Conread position: 157-736
Cow position:
Alignm length: 596
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 456

Conread position: 157-760
Cow position:
Alignm length: 624
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 236

Conread position: 158-491
Cow position:
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 254

Conread position: 163-736
Cow position:
Alignm length: 592
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 164-388
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 136, 85

Conread position: 164-435
Cow position:
Alignm length: 288
Alignm identity: 204
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 62, 115

Conread position: 164-454
Cow position:
Alignm length: 305
Alignm identity: 203
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 39, 81

Conread position: 164-556
Cow position:
Alignm length: 408
Alignm identity: 198
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 62, 253

Conread position: 164-736
Cow position:
Alignm length: 588
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 79

Conread position: 164-736
Cow position:
Alignm length: 579
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 79

Conread position: 164-736
Cow position:
Alignm length: 592
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 248

Conread position: 164-736
Cow position:
Alignm length: 584
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 79

Conread position: 164-736
Cow position:
Alignm length: 595
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 388

Conread position: 166-736
Cow position:
Alignm length: 589
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 44

Conread position: 167-736
Cow position:
Alignm length: 590
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 36

Conread position: 167-813
Cow position:
Alignm length: 666
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 168

Conread position: 186-435
Cow position:
Alignm length: 258
Alignm identity: 191
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 33, 0

Conread position: 189-740
Cow position:
Alignm length: 574
Alignm identity: 365
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 41, 102

Conread position: 189-813
Cow position:
Alignm length: 647
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 246

Conread position: 190-730
Cow position:
Alignm length: 560
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 87

Conread position: 210-736
Cow position:
Alignm length: 544
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 231

Conread position: 220-648
Cow position:
Alignm length: 433
Alignm identity: 276
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 83, 228

Conread position: 250-736
Cow position:
Alignm length: 503
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 273

Conread position: 253-736
Cow position:
Alignm length: 498
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 84

Conread position: 291-723
Cow position:
Alignm length: 438
Alignm identity: 294
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 16

Conread position: 299-524
Cow position:
Alignm length: 229
Alignm identity: 169
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 75, 79

Conread position: 299-812
Cow position:
Alignm length: 531
Alignm identity: 322
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 16

Conread position: 300-736
Cow position:
Alignm length: 442
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 301-598
Cow position:
Alignm length: 302
Alignm identity: 218
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 25, 96

Conread position: 301-812
Cow position:
Alignm length: 529
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 97

Conread position: 303-671
Cow position:
Alignm length: 373
Alignm identity: 247
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 7, 14

Conread position: 303-730
Cow position:
Alignm length: 430
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 64

Conread position: 303-736
Cow position:
Alignm length: 446
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 31

Conread position: 303-813
Cow position:
Alignm length: 524
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 76

Conread position: 307-491
Cow position:
Alignm length: 187
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 89

Conread position: 307-736
Cow position:
Alignm length: 432
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 96

Conread position: 308-813
Cow position:
Alignm length: 520
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 425, 87

Conread position: 309-736
Cow position:
Alignm length: 431
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 47

Conread position: 316-583
Cow position:
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 320-506
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 124, 0

Conread position: 320-811
Cow position:
Alignm length: 508
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 152

Conread position: 321-731
Cow position:
Alignm length: 414
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 146

Conread position: 325-736
Cow position:
Alignm length: 414
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 118

Conread position: 352-740
Cow position:
Alignm length: 390
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 43

Conread position: 390-724
Cow position:
Alignm length: 336
Alignm identity: 227
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 231, 52

Conread position: 397-736
Cow position:
Alignm length: 343
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 217

Conread position: 402-640
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 123, 42

Conread position: 415-736
Cow position:
Alignm length: 325
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 149

Conread position: 427-736
Cow position:
Alignm length: 321
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 428-736
Cow position:
Alignm length: 309
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 0

Conread position: 438-736
Cow position:
Alignm length: 302
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 175

Conread position: 444-723
Cow position:
Alignm length: 280
Alignm identity: 177
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 449-735
Cow position:
Alignm length: 293
Alignm identity: 207
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 27, 13

Conread position: 450-813
Cow position:
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 159

Conread position: 460-736
Cow position:
Alignm length: 279
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 22

Conread position: 466-707
Cow position:
Alignm length: 243
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 202, 219

Conread position: 468-739
Cow position:
Alignm length: 273
Alignm identity: 195
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 153, 20

Conread position: 495-736
Cow position:
Alignm length: 242
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 495-813
Cow position:
Alignm length: 330
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 117

Conread position: 512-864
Cow position:
Alignm length: 368
Alignm identity: 243
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 109, 50

Conread position: 520-813
Cow position:
Alignm length: 308
Alignm identity: 216
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 67, 93

Conread position: 552-736
Cow position:
Alignm length: 186
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 60

Conread position: 556-736
Cow position:
Alignm length: 182
Alignm identity: 149
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 65, 0

Conread position: 581-816
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 155, 84

Conread position: 597-813
Cow position:
Alignm length: 229
Alignm identity: 173
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 24, 15

Conread position: 601-732
Cow position:
Alignm length: 133
Alignm identity: 108
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 20, 11

Conread position: 602-736
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 19, 84

Conread position: 614-736
Cow position:
Alignm length: 125
Alignm identity: 107
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 7, 0

Conread position: 620-736
Cow position:
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 620-813
Cow position:
Alignm length: 194
Alignm identity: 147
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 105, 0

Conread position: 625-815
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 122, 113

Show alignments to all cow chromosomes.