Cow genome map

Conread name: Ss1.1-rspc011_k9.5

Conread position: 57-724
Cow position:
Alignm length: 701
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 17

Conread position: 63-572
Cow position:
Alignm length: 530
Alignm identity: 334
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 8

Conread position: 69-731
Cow position:
Alignm length: 688
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 9

Conread position: 69-732
Cow position:
Alignm length: 687
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 80

Conread position: 69-736
Cow position:
Alignm length: 690
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 28

Conread position: 74-736
Cow position:
Alignm length: 695
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 206

Conread position: 74-736
Cow position:
Alignm length: 699
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 78

Conread position: 74-815
Cow position:
Alignm length: 774
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 35

Conread position: 75-813
Cow position:
Alignm length: 767
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 144

Conread position: 78-336
Cow position:
Alignm length: 263
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 147, 53

Conread position: 78-479
Cow position:
Alignm length: 423
Alignm identity: 285
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 78, 52

Conread position: 78-707
Cow position:
Alignm length: 652
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 31

Conread position: 78-717
Cow position:
Alignm length: 678
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 97

Conread position: 78-736
Cow position:
Alignm length: 695
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 203

Conread position: 78-736
Cow position:
Alignm length: 692
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 584

Conread position: 78-736
Cow position:
Alignm length: 693
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 375

Conread position: 78-736
Cow position:
Alignm length: 687
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 318

Conread position: 80-524
Cow position:
Alignm length: 461
Alignm identity: 292
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 64

Conread position: 80-824
Cow position:
Alignm length: 771
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 85

Conread position: 81-558
Cow position:
Alignm length: 495
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 57

Conread position: 81-736
Cow position:
Alignm length: 668
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 72

Conread position: 81-821
Cow position:
Alignm length: 762
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 101

Conread position: 84-732
Cow position:
Alignm length: 657
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 66

Conread position: 87-736
Cow position:
Alignm length: 670
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 63

Conread position: 98-736
Cow position:
Alignm length: 660
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 60

Conread position: 99-512
Cow position:
Alignm length: 434
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 84

Conread position: 102-811
Cow position:
Alignm length: 723
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 115

Conread position: 107-658
Cow position:
Alignm length: 567
Alignm identity: 362
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 210, 36

Conread position: 107-706
Cow position:
Alignm length: 624
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 130

Conread position: 115-736
Cow position:
Alignm length: 638
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 25

Conread position: 132-732
Cow position:
Alignm length: 619
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 25

Conread position: 136-739
Cow position:
Alignm length: 613
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 42

Conread position: 147-736
Cow position:
Alignm length: 609
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 231

Conread position: 148-459
Cow position:
Alignm length: 339
Alignm identity: 238
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 17, 0

Conread position: 148-716
Cow position:
Alignm length: 594
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 121

Conread position: 148-730
Cow position:
Alignm length: 604
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 148-736
Cow position:
Alignm length: 602
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 191

Conread position: 148-736
Cow position:
Alignm length: 603
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 228

Conread position: 150-736
Cow position:
Alignm length: 608
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 56

Conread position: 150-736
Cow position:
Alignm length: 608
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 479

Conread position: 151-431
Cow position:
Alignm length: 297
Alignm identity: 205
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 65, 0

Conread position: 151-519
Cow position:
Alignm length: 386
Alignm identity: 269
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 68, 293

Conread position: 151-585
Cow position:
Alignm length: 448
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 208

Conread position: 151-650
Cow position:
Alignm length: 519
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 469

Conread position: 151-736
Cow position:
Alignm length: 597
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 143

Conread position: 151-736
Cow position:
Alignm length: 603
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 453

Conread position: 151-736
Cow position:
Alignm length: 603
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 56

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 261

Conread position: 151-736
Cow position:
Alignm length: 601
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 240

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 371

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 220

Conread position: 151-736
Cow position:
Alignm length: 602
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 151-736
Cow position:
Alignm length: 605
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 137

Conread position: 151-736
Cow position:
Alignm length: 604
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 476

Conread position: 152-462
Cow position:
Alignm length: 326
Alignm identity: 231
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 77, 28

Conread position: 152-617
Cow position:
Alignm length: 483
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 28

Conread position: 152-659
Cow position:
Alignm length: 530
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 342

Conread position: 153-638
Cow position:
Alignm length: 501
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 135

Conread position: 154-421
Cow position:
Alignm length: 274
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 115

Conread position: 154-491
Cow position:
Alignm length: 353
Alignm identity: 247
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 66, 49

Conread position: 154-513
Cow position:
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 253

Conread position: 154-579
Cow position:
Alignm length: 443
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 242

Conread position: 154-736
Cow position:
Alignm length: 608
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 154-736
Cow position:
Alignm length: 602
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 476

Conread position: 154-736
Cow position:
Alignm length: 602
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 362

Conread position: 154-736
Cow position:
Alignm length: 603
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 474

Conread position: 154-736
Cow position:
Alignm length: 601
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 340

Conread position: 154-824
Cow position:
Alignm length: 699
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 46

Conread position: 155-592
Cow position:
Alignm length: 449
Alignm identity: 278
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 52, 41

Conread position: 156-737
Cow position:
Alignm length: 606
Alignm identity: 397
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 27, 45

Conread position: 157-736
Cow position:
Alignm length: 599
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 51

Conread position: 157-736
Cow position:
Alignm length: 598
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 549

Conread position: 157-736
Cow position:
Alignm length: 597
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 352

Conread position: 162-487
Cow position:
Alignm length: 350
Alignm identity: 233
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 317

Conread position: 163-469
Cow position:
Alignm length: 325
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 318

Conread position: 164-699
Cow position:
Alignm length: 555
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 463

Conread position: 164-727
Cow position:
Alignm length: 583
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 448

Conread position: 164-736
Cow position:
Alignm length: 596
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 85

Conread position: 164-736
Cow position:
Alignm length: 594
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 83

Conread position: 164-736
Cow position:
Alignm length: 603
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 474

Conread position: 164-736
Cow position:
Alignm length: 592
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 361

Conread position: 164-736
Cow position:
Alignm length: 593
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 474

Conread position: 164-736
Cow position:
Alignm length: 588
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 132

Conread position: 167-736
Cow position:
Alignm length: 589
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 463

Conread position: 219-719
Cow position:
Alignm length: 514
Alignm identity: 318
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 158

Conread position: 219-736
Cow position:
Alignm length: 541
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 145

Conread position: 219-736
Cow position:
Alignm length: 546
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 24

Conread position: 236-736
Cow position:
Alignm length: 516
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 390

Conread position: 243-736
Cow position:
Alignm length: 507
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 244-562
Cow position:
Alignm length: 322
Alignm identity: 205
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 201, 20

Conread position: 250-565
Cow position:
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 289-732
Cow position:
Alignm length: 458
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 26

Conread position: 299-736
Cow position:
Alignm length: 441
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 299-741
Cow position:
Alignm length: 452
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 17

Conread position: 300-736
Cow position:
Alignm length: 441
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 175

Conread position: 301-736
Cow position:
Alignm length: 438
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 178

Conread position: 301-740
Cow position:
Alignm length: 449
Alignm identity: 292
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 10, 18

Conread position: 303-811
Cow position:
Alignm length: 523
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 26

Conread position: 307-736
Cow position:
Alignm length: 433
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 304

Conread position: 329-736
Cow position:
Alignm length: 426
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 234

Conread position: 336-736
Cow position:
Alignm length: 404
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 278

Conread position: 346-736
Cow position:
Alignm length: 393
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 250

Conread position: 364-722
Cow position:
Alignm length: 362
Alignm identity: 241
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 84, 63

Conread position: 411-813
Cow position:
Alignm length: 406
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 67

Conread position: 423-789
Cow position:
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 145

Conread position: 433-740
Cow position:
Alignm length: 313
Alignm identity: 199
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 15, 171

Conread position: 435-738
Cow position:
Alignm length: 308
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 436-723
Cow position:
Alignm length: 290
Alignm identity: 188
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 6, 235

Conread position: 444-786
Cow position:
Alignm length: 352
Alignm identity: 241
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 96, 88

Conread position: 449-616
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 449-736
Cow position:
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 455-732
Cow position:
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 229

Conread position: 457-617
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 140, 0

Conread position: 467-813
Cow position:
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 140

Conread position: 469-699
Cow position:
Alignm length: 233
Alignm identity: 158
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 25, 44

Conread position: 478-816
Cow position:
Alignm length: 341
Alignm identity: 237
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 83, 136

Conread position: 479-791
Cow position:
Alignm length: 324
Alignm identity: 229
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 7, 59

Conread position: 495-687
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 110, 0

Conread position: 497-730
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 203, 163

Conread position: 499-736
Cow position:
Alignm length: 239
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 113

Conread position: 516-824
Cow position:
Alignm length: 320
Alignm identity: 208
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 41, 49

Conread position: 518-727
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 103, 94

Conread position: 519-736
Cow position:
Alignm length: 220
Alignm identity: 172
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 10, 91

Conread position: 520-736
Cow position:
Alignm length: 218
Alignm identity: 168
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 101, 11

Conread position: 531-813
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 208, 48

Conread position: 533-722
Cow position:
Alignm length: 190
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 563-736
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 563-813
Cow position:
Alignm length: 263
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 46

Conread position: 566-736
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 46

Conread position: 571-794
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 51, 41

Conread position: 574-685
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 38

Conread position: 583-736
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 29

Conread position: 589-758
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 23

Conread position: 594-736
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 597-736
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 609-736
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 0

Show alignments to all cow chromosomes.