Cow genome map

Conread name: Ss1.1-rspc011_k9.5

Conread position: 57-724
Cow position: chr9:4984199-4984883 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 17

Conread position: 63-572
Cow position: chr9:52290087-52290599 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 334
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 8

Conread position: 69-731
Cow position: chr9:37163368-37162683 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 9

Conread position: 69-732
Cow position: chr9:9012555-9013231 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 80

Conread position: 69-736
Cow position: chr9:4531941-4532619 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 28

Conread position: 74-736
Cow position: chr9:2185405-2186094 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 206

Conread position: 74-736
Cow position: chr9:31020258-31020950 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 78

Conread position: 74-815
Cow position: chr9:6757024-6757780 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 35

Conread position: 75-813
Cow position: chr9:64118290-64119033 (view UCSC Genome Browser custom track)
Alignm length: 767
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 144

Conread position: 78-336
Cow position: chr9:3585760-3586017 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 147, 53

Conread position: 78-479
Cow position: chr9:1294359-1293944 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 285
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 78, 52

Conread position: 78-707
Cow position: chr9:1252514-1251876 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 31

Conread position: 78-717
Cow position: chr9:2051896-2052557 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 97

Conread position: 78-736
Cow position: chr9:2170494-2171186 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 203

Conread position: 78-736
Cow position: chr9:3548734-3548044 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 584

Conread position: 78-736
Cow position: chr9:10321257-10321936 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 375

Conread position: 78-736
Cow position: chr9:59483228-59482544 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 318

Conread position: 80-524
Cow position: chr9:26712859-26712412 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 292
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 64

Conread position: 80-824
Cow position: chr9:35657426-35658169 (view UCSC Genome Browser custom track)
Alignm length: 771
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 85

Conread position: 81-558
Cow position: chr9:20310270-20309788 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 57

Conread position: 81-736
Cow position: chr9:3155501-3156151 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 72

Conread position: 81-821
Cow position: chr9:39992383-39993136 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 101

Conread position: 84-732
Cow position: chr9:28626565-28625917 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 66

Conread position: 87-736
Cow position: chr9:15071981-15072642 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 63

Conread position: 98-736
Cow position: chr9:37130064-37129417 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 60

Conread position: 99-512
Cow position: chr9:13219804-13220229 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 84

Conread position: 102-811
Cow position: chr9:6111478-6110789 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 115

Conread position: 107-658
Cow position: chr9:3868014-3867465 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 362
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 210, 36

Conread position: 107-706
Cow position: chr9:223065-222449 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 130

Conread position: 115-736
Cow position: chr9:793015-792385 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 25

Conread position: 132-732
Cow position: chr9:5424662-5424060 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 25

Conread position: 136-739
Cow position: chr9:52570188-52570782 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 42

Conread position: 147-736
Cow position: chr9:25755684-25755095 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 231

Conread position: 148-459
Cow position: chr9:51183188-51182850 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 17, 0

Conread position: 148-716
Cow position: chr9:28021067-28021659 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 121

Conread position: 148-730
Cow position: chr9:59456079-59455476 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 148-736
Cow position: chr9:6051517-6050920 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 191

Conread position: 148-736
Cow position: chr9:47001729-47002317 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 228

Conread position: 150-736
Cow position: chr9:163968-163375 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 56

Conread position: 150-736
Cow position: chr9:36724025-36724630 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 479

Conread position: 151-431
Cow position: chr9:418005-417709 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 65, 0

Conread position: 151-519
Cow position: chr9:22650681-22651056 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 269
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 68, 293

Conread position: 151-585
Cow position: chr9:6831018-6830580 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 208

Conread position: 151-650
Cow position: chr9:29028703-29028186 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 469

Conread position: 151-736
Cow position: chr9:10314906-10315495 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 143

Conread position: 151-736
Cow position: chr9:16175294-16175895 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 453

Conread position: 151-736
Cow position: chr9:27034235-27034828 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 56

Conread position: 151-736
Cow position: chr9:30671896-30672496 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 261

Conread position: 151-736
Cow position: chr9:31807066-31807661 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 240

Conread position: 151-736
Cow position: chr9:37971681-37971082 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 371

Conread position: 151-736
Cow position: chr9:42309209-42309811 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 220

Conread position: 151-736
Cow position: chr9:42568399-42569000 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 151-736
Cow position: chr9:59535625-59536223 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 137

Conread position: 151-736
Cow position: chr9:60278496-60277894 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 476

Conread position: 152-462
Cow position: chr9:830027-829705 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 77, 28

Conread position: 152-617
Cow position: chr9:831901-831422 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 28

Conread position: 152-659
Cow position: chr9:46626275-46625748 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 342

Conread position: 153-638
Cow position: chr9:2199639-2200137 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 135

Conread position: 154-421
Cow position: chr9:3394771-3394501 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 115

Conread position: 154-491
Cow position: chr9:1979476-1979822 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 66, 49

Conread position: 154-513
Cow position: chr9:54360136-54360507 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 253

Conread position: 154-579
Cow position: chr9:7002083-7002524 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 242

Conread position: 154-736
Cow position: chr9:1996390-1995785 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 154-736
Cow position: chr9:2500766-2500166 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 476

Conread position: 154-736
Cow position: chr9:3567324-3566724 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 362

Conread position: 154-736
Cow position: chr9:25483401-25484001 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 474

Conread position: 154-736
Cow position: chr9:59174628-59174032 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 340

Conread position: 154-824
Cow position: chr9:3024642-3025331 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 46

Conread position: 155-592
Cow position: chr9:23409752-23410189 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 278
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 52, 41

Conread position: 156-737
Cow position: chr9:12845995-12845421 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 397
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 27, 45

Conread position: 157-736
Cow position: chr9:5003545-5004127 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 51

Conread position: 157-736
Cow position: chr9:29629215-29628619 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 549

Conread position: 157-736
Cow position: chr9:59443387-59443978 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 352

Conread position: 162-487
Cow position: chr9:2697400-2697052 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 233
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 317

Conread position: 163-469
Cow position: chr9:32968279-32968602 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 318

Conread position: 164-699
Cow position: chr9:4672146-4672698 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 463

Conread position: 164-727
Cow position: chr9:27933633-27934210 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 448

Conread position: 164-736
Cow position: chr9:781262-780676 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 85

Conread position: 164-736
Cow position: chr9:1076658-1076069 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 83

Conread position: 164-736
Cow position: chr9:16267899-16268500 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 474

Conread position: 164-736
Cow position: chr9:28677514-28678101 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 361

Conread position: 164-736
Cow position: chr9:34243059-34242469 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 474

Conread position: 164-736
Cow position: chr9:45872893-45873477 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 132

Conread position: 167-736
Cow position: chr9:31194625-31194038 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 463

Conread position: 219-719
Cow position: chr9:55616944-55617441 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 318
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 158

Conread position: 219-736
Cow position: chr9:131598-131061 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 145

Conread position: 219-736
Cow position: chr9:17064796-17064255 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 24

Conread position: 236-736
Cow position: chr9:9055451-9054937 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 390

Conread position: 243-736
Cow position: chr9:25023679-25023173 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 244-562
Cow position: chr9:26002490-26002177 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 205
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 201, 20

Conread position: 250-565
Cow position: chr9:8969294-8968965 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 289-732
Cow position: chr9:34992066-34992517 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 26

Conread position: 299-736
Cow position: chr9:7062404-7061964 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 299-741
Cow position: chr9:64158813-64159252 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 17

Conread position: 300-736
Cow position: chr9:37064105-37063675 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 175

Conread position: 301-736
Cow position: chr9:3542502-3542935 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 178

Conread position: 301-740
Cow position: chr9:3725969-3726411 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 292
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 10, 18

Conread position: 303-811
Cow position: chr9:3356282-3355779 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 26

Conread position: 307-736
Cow position: chr9:30826379-30826810 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 304

Conread position: 329-736
Cow position: chr9:3586075-3586496 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 234

Conread position: 336-736
Cow position: chr9:3006519-3006117 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 278

Conread position: 346-736
Cow position: chr9:50789414-50789805 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 250

Conread position: 364-722
Cow position: chr9:4280217-4280570 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 241
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 84, 63

Conread position: 411-813
Cow position: chr9:2001601-2001220 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 67

Conread position: 423-789
Cow position: chr9:18836823-18837201 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 145

Conread position: 433-740
Cow position: chr9:35317754-35317444 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 199
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 15, 171

Conread position: 435-738
Cow position: chr9:1979802-1980109 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 436-723
Cow position: chr9:59510620-59510906 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 188
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 6, 235

Conread position: 444-786
Cow position: chr9:6973964-6974312 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 96, 88

Conread position: 449-616
Cow position: chr9:2064834-2064668 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 449-736
Cow position: chr9:51182353-51182066 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 455-732
Cow position: chr9:32968815-32969091 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 229

Conread position: 457-617
Cow position: chr9:829373-829211 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 140, 0

Conread position: 467-813
Cow position: chr9:13477361-13477008 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 140

Conread position: 469-699
Cow position: chr9:22410251-22410024 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 25, 44

Conread position: 478-816
Cow position: chr9:43662830-43663149 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 83, 136

Conread position: 479-791
Cow position: chr9:15683802-15684117 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 7, 59

Conread position: 495-687
Cow position: chr9:34719857-34720052 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 110, 0

Conread position: 497-730
Cow position: chr9:3394095-3393866 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 203, 163

Conread position: 499-736
Cow position: chr9:40191785-40191548 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 113

Conread position: 516-824
Cow position: chr9:39040482-39040796 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 208
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 41, 49

Conread position: 518-727
Cow position: chr9:18067309-18067100 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 103, 94

Conread position: 519-736
Cow position: chr9:54361346-54361560 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 172
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 10, 91

Conread position: 520-736
Cow position: chr9:64018546-64018331 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 101, 11

Conread position: 531-813
Cow position: chr9:1635477-1635755 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 208, 48

Conread position: 533-722
Cow position: chr9:37095120-37095309 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 563-736
Cow position: chr9:22653521-22653694 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 563-813
Cow position: chr9:44817814-44818074 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 46

Conread position: 566-736
Cow position: chr9:49177869-49177699 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 46

Conread position: 571-794
Cow position: chr9:20309568-20309335 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 51, 41

Conread position: 574-685
Cow position: chr9:45908591-45908479 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 38

Conread position: 583-736
Cow position: chr9:31064408-31064561 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 29

Conread position: 589-758
Cow position: chr9:8968968-8968795 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 23

Conread position: 594-736
Cow position: chr9:18509817-18509675 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 597-736
Cow position: chr9:2488142-2488002 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 609-736
Cow position: chr9:7002521-7002649 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 0

Show alignments to all cow chromosomes.