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Cow genome map

           
Conread name:
           
Ss1.1-rspc022_a8.5
        

               
Conread position:
               
300-484
               

               
Cow position:
               
chr20:24883300-24883113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
310-479
               

               
Cow position:
               
chr20:14755764-14755601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
144, 9
               

               
Conread position:
               
310-504
               

               
Cow position:
               
chr20:11661248-11661060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
144, 90
               

               
Conread position:
               
311-469
               

               
Cow position:
               
chr20:36097597-36097755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
143, 8
               

               
Conread position:
               
312-468
               

               
Cow position:
               
chr20:16291766-16291922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
141, 7
               

               
Conread position:
               
312-468
               

               
Cow position:
               
chr20:34334971-34334812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
313-479
               

               
Cow position:
               
chr20:34349138-34348970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
314-479
               

               
Cow position:
               
chr20:33462305-33462471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
314-484
               

               
Cow position:
               
chr20:41313466-41313628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
140, 42
               

               
Conread position:
               
315-479
               

               
Cow position:
               
chr20:11548644-11548486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
139, 72
               

               
Conread position:
               
316-479
               

               
Cow position:
               
chr20:35310406-35310572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 134
               

               
Conread position:
               
316-484
               

               
Cow position:
               
chr20:34202716-34202889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
317-468
               

               
Cow position:
               
chr20:29768585-29768743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
317-479
               

               
Cow position:
               
chr20:2316343-2316185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
116, 74
               

               
Conread position:
               
317-496
               

               
Cow position:
               
chr20:19237157-19237330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
137, 83
               

               
Conread position:
               
319-435
               

               
Cow position:
               
chr20:22959263-22959148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
319-451
               

               
Cow position:
               
chr20:2743053-2742921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 74
               

               
Conread position:
               
319-451
               

               
Cow position:
               
chr20:25474637-25474769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 48
               

               
Conread position:
               
319-456
               

               
Cow position:
               
chr20:18831794-18831661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
101, 89
               

               
Conread position:
               
319-456
               

               
Cow position:
               
chr20:34207053-34207191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
319-464
               

               
Cow position:
               
chr20:354817-354671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
319-464
               

               
Cow position:
               
chr20:14607827-14607686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
135, 77
               

               
Conread position:
               
319-467
               

               
Cow position:
               
chr20:6848979-6849125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
135, 68
               

               
Conread position:
               
319-470
               

               
Cow position:
               
chr20:20459676-20459825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 28
               

               
Conread position:
               
319-474
               

               
Cow position:
               
chr20:11499092-11499240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
135, 61
               

               
Conread position:
               
319-475
               

               
Cow position:
               
chr20:12581870-12581718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
135, 72
               

               
Conread position:
               
319-476
               

               
Cow position:
               
chr20:11008254-11008412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
319-476
               

               
Cow position:
               
chr20:23880023-23879867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 17
               

               
Conread position:
               
319-477
               

               
Cow position:
               
chr20:8578333-8578495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 62
               

               
Conread position:
               
319-477
               

               
Cow position:
               
chr20:25009548-25009393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
53, 63
               

               
Conread position:
               
319-478
               

               
Cow position:
               
chr20:3255120-3255275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
45, 90
               

               
Conread position:
               
319-478
               

               
Cow position:
               
chr20:5703555-5703713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
23, 134
               

               
Conread position:
               
319-478
               

               
Cow position:
               
chr20:19636092-19635937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
125, 89
               

               
Conread position:
               
319-478
               

               
Cow position:
               
chr20:20158220-20158372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
134, 78
               

               
Conread position:
               
319-478
               

               
Cow position:
               
chr20:33076739-33076581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:297924-297762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
69, 130
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:382048-381892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
135, 72
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:1824544-1824389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
135, 81
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:2819627-2819790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:5365010-5365170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
135, 140
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:6054425-6054265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
135, 116
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:6248517-6248357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
135, 126
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:7417083-7416918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:7738147-7737992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
135, 78
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:12126220-12126059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
53, 63
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:12420534-12420377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
134, 22
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:16941204-16941040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:17251801-17251961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
134, 87
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:18379463-18379619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
135, 24
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:19919732-19919576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:22065150-22065303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
134, 66
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:23358410-23358252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
135, 14
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:24491945-24491785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:24711925-24712082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:24960021-24960182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:26996614-26996776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:33067276-33067117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 72
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:36239331-36239492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:37357940-37358101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:39016788-39016627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:39325475-39325634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
135, 125
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:39417819-39417661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
135, 81
               

               
Conread position:
               
319-479
               

               
Cow position:
               
chr20:41089712-41089550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
319-480
               

               
Cow position:
               
chr20:20202303-20202463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
134, 81
               

               
Conread position:
               
319-480
               

               
Cow position:
               
chr20:39398565-39398725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
130, 97
               

               
Conread position:
               
319-484
               

               
Cow position:
               
chr20:4892035-4891871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
135, 76
               

               
Conread position:
               
319-484
               

               
Cow position:
               
chr20:8442371-8442208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
107, 72
               

               
Conread position:
               
319-484
               

               
Cow position:
               
chr20:20967405-20967568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
122, 81
               

               
Conread position:
               
319-487
               

               
Cow position:
               
chr20:5950559-5950390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
319-487
               

               
Cow position:
               
chr20:6370378-6370543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
319-487
               

               
Cow position:
               
chr20:34221563-34221734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 48
               

               
Conread position:
               
319-490
               

               
Cow position:
               
chr20:20124949-20124778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
136, 22
               

               
Conread position:
               
319-499
               

               
Cow position:
               
chr20:2798907-2798732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
172, 68
               

               
Conread position:
               
319-500
               

               
Cow position:
               
chr20:5814650-5814825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
319-500
               

               
Cow position:
               
chr20:29990363-29990188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
135, 10
               

               
Conread position:
               
319-502
               

               
Cow position:
               
chr20:15118360-15118543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
136, 48
               

               
Conread position:
               
319-502
               

               
Cow position:
               
chr20:38514863-38515052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
78, 43
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr20:1139683-1139502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
134, 10
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr20:14433337-14433158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
134, 61
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr20:25021512-25021697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 22
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr20:27315062-27315238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
135, 68
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr20:30639699-30639513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
58, 52
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr20:34097869-34097684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
82, 165
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr20:34251588-34251405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
135, 163
               

               
Conread position:
               
319-504
               

               
Cow position:
               
chr20:3141658-3141840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
319-504
               

               
Cow position:
               
chr20:4999028-4998840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
319-504
               

               
Cow position:
               
chr20:11359548-11359372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
319-504
               

               
Cow position:
               
chr20:11611763-11611947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
135, 69
               

               
Conread position:
               
319-504
               

               
Cow position:
               
chr20:14283004-14283190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
319-504
               

               
Cow position:
               
chr20:14897821-14898007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
319-504
               

               
Cow position:
               
chr20:25953348-25953536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 63
               

               
Conread position:
               
319-504
               

               
Cow position:
               
chr20:26041014-26040835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
135, 72
               

               
Conread position:
               
319-504
               

               
Cow position:
               
chr20:30744637-30744454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
319-504
               

               
Cow position:
               
chr20:35176693-35176508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
135, 158
               

               
Conread position:
               
320-476
               

               
Cow position:
               
chr20:9034131-9033977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
134, 33
               

               
Conread position:
               
320-476
               

               
Cow position:
               
chr20:17544709-17544866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
320-479
               

               
Cow position:
               
chr20:17370166-17370003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
320-487
               

               
Cow position:
               
chr20:21291745-21291919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
320-487
               

               
Cow position:
               
chr20:31845200-31845038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
133, 80
               

               
Conread position:
               
320-499
               

               
Cow position:
               
chr20:14490331-14490504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
320-504
               

               
Cow position:
               
chr20:13023417-13023237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
53, 71
               

               
Conread position:
               
321-475
               

               
Cow position:
               
chr20:5104140-5103985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
321-475
               

               
Cow position:
               
chr20:39229851-39229696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
321-476
               

               
Cow position:
               
chr20:38414327-38414173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
321-477
               

               
Cow position:
               
chr20:28935553-28935402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
132, 9
               

               
Conread position:
               
321-478
               

               
Cow position:
               
chr20:8409371-8409218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
321-479
               

               
Cow position:
               
chr20:11002487-11002646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
321-479
               

               
Cow position:
               
chr20:19201617-19201776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
321-479
               

               
Cow position:
               
chr20:21344553-21344712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
321-479
               

               
Cow position:
               
chr20:23548840-23548999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
321-479
               

               
Cow position:
               
chr20:34271413-34271572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
321-479
               

               
Cow position:
               
chr20:35589598-35589441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
133, 73
               

               
Conread position:
               
321-479
               

               
Cow position:
               
chr20:39136901-39136743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
133, 55
               

               
Conread position:
               
321-482
               

               
Cow position:
               
chr20:600392-600544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
133, 60
               

               
Conread position:
               
321-484
               

               
Cow position:
               
chr20:13068065-13067901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
321-484
               

               
Cow position:
               
chr20:15432801-15432638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
133, 55
               

               
Conread position:
               
321-485
               

               
Cow position:
               
chr20:14739733-14739572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
321-490
               

               
Cow position:
               
chr20:34083801-34083973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 55
               

               
Conread position:
               
321-490
               

               
Cow position:
               
chr20:38872915-38872745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
128, 55
               

               
Conread position:
               
321-500
               

               
Cow position:
               
chr20:17840831-17841005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
19, 89
               

               
Conread position:
               
321-502
               

               
Cow position:
               
chr20:3035419-3035606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
321-502
               

               
Cow position:
               
chr20:40442381-40442199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 158
               

               
Conread position:
               
321-504
               

               
Cow position:
               
chr20:10200432-10200615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
133, 162
               

               
Conread position:
               
321-504
               

               
Cow position:
               
chr20:12205648-12205475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
156, 79
               

               
Conread position:
               
321-504
               

               
Cow position:
               
chr20:33359387-33359204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
80, 107
               

               
Conread position:
               
321-504
               

               
Cow position:
               
chr20:35741854-35742036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
132, 163
               

               
Conread position:
               
322-440
               

               
Cow position:
               
chr20:32463437-32463323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 55
               

               
Conread position:
               
322-468
               

               
Cow position:
               
chr20:7426110-7425967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
132, 78
               

               
Conread position:
               
322-472
               

               
Cow position:
               
chr20:39268998-39268847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
122, 61
               

               
Conread position:
               
322-475
               

               
Cow position:
               
chr20:3148771-3148919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
132, 84
               

               
Conread position:
               
322-478
               

               
Cow position:
               
chr20:26387548-26387697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
322-479
               

               
Cow position:
               
chr20:8679576-8679418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
322-479
               

               
Cow position:
               
chr20:11340717-11340563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
132, 66
               

               
Conread position:
               
322-479
               

               
Cow position:
               
chr20:19834743-19834589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
131, 69
               

               
Conread position:
               
322-479
               

               
Cow position:
               
chr20:27407799-27407653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
322-479
               

               
Cow position:
               
chr20:38061679-38061531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
132, 76
               

               
Conread position:
               
322-484
               

               
Cow position:
               
chr20:13829347-13829507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
322-487
               

               
Cow position:
               
chr20:17606880-17606714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
322-490
               

               
Cow position:
               
chr20:3564244-3564406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
132, 7
               

               
Conread position:
               
322-498
               

               
Cow position:
               
chr20:16977757-16977573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 82
               

               
Conread position:
               
322-503
               

               
Cow position:
               
chr20:26850699-26850517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
322-504
               

               
Cow position:
               
chr20:24069893-24070069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 70
               

               
Conread position:
               
323-489
               

               
Cow position:
               
chr20:28249268-28249435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
324-482
               

               
Cow position:
               
chr20:35888673-35888514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
326-462
               

               
Cow position:
               
chr20:30821516-30821648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
128, 30
               

               
Conread position:
               
326-465
               

               
Cow position:
               
chr20:12033531-12033398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
326-474
               

               
Cow position:
               
chr20:13994905-13995047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
326-474
               

               
Cow position:
               
chr20:17733468-17733319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
118, 122
               

               
Conread position:
               
326-478
               

               
Cow position:
               
chr20:23506026-23506177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
67, 84
               

               
Conread position:
               
326-479
               

               
Cow position:
               
chr20:26424497-26424650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
128, 73
               

               
Conread position:
               
326-479
               

               
Cow position:
               
chr20:34881306-34881161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
326-484
               

               
Cow position:
               
chr20:13876620-13876462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
326-487
               

               
Cow position:
               
chr20:11751744-11751904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
128, 26
               

               
Conread position:
               
326-487
               

               
Cow position:
               
chr20:23846573-23846414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
128, 71
               

               
Conread position:
               
326-487
               

               
Cow position:
               
chr20:29845142-29845304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
71, 54
               

               
Conread position:
               
326-502
               

               
Cow position:
               
chr20:8556178-8556006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 74
               

               
Conread position:
               
326-502
               

               
Cow position:
               
chr20:18500618-18500791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
128, 156
               

               
Conread position:
               
327-476
               

               
Cow position:
               
chr20:30028026-30027879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
58, 118
               

               
Conread position:
               
327-479
               

               
Cow position:
               
chr20:36741555-36741704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
327-487
               

               
Cow position:
               
chr20:15529952-15530111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
157, 125
               

               
Conread position:
               
328-479
               

               
Cow position:
               
chr20:14980412-14980265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 52
               

               
Conread position:
               
328-499
               

               
Cow position:
               
chr20:17524365-17524539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
328-503
               

               
Cow position:
               
chr20:6473826-6474002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
50, 39
               

               
Conread position:
               
329-475
               

               
Cow position:
               
chr20:28605303-28605444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
125, 58
               

               
Conread position:
               
329-476
               

               
Cow position:
               
chr20:11920638-11920494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
125, 115
               

               
Conread position:
               
329-479
               

               
Cow position:
               
chr20:28594381-28594534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 100
               

               
Conread position:
               
329-479
               

               
Cow position:
               
chr20:35605301-35605445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
125, 68
               

               
Conread position:
               
329-487
               

               
Cow position:
               
chr20:4945160-4945000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
331-468
               

               
Cow position:
               
chr20:22937223-22937085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
331-470
               

               
Cow position:
               
chr20:20926533-20926393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
332-479
               

               
Cow position:
               
chr20:5268746-5268598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
332-479
               

               
Cow position:
               
chr20:21169665-21169527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 50
               

               
Conread position:
               
332-479
               

               
Cow position:
               
chr20:23062247-23062394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
122, 112
               

               
Conread position:
               
335-479
               

               
Cow position:
               
chr20:4931181-4931321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
118, 22
               

               
Conread position:
               
335-490
               

               
Cow position:
               
chr20:29754876-29755030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
119, 41
               

               
Conread position:
               
335-503
               

               
Cow position:
               
chr20:14460481-14460650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
343-501
               

               
Cow position:
               
chr20:41704263-41704424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
55, 143
               

               
Conread position:
               
343-504
               

               
Cow position:
               
chr20:41323256-41323095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
354-487
               

               
Cow position:
               
chr20:34918524-34918658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
356-498
               

               
Cow position:
               
chr20:33557514-33557656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
357-487
               

               
Cow position:
               
chr20:2827898-2828026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
360-484
               

               
Cow position:
               
chr20:7659104-7658978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
362-487
               

               
Cow position:
               
chr20:20892551-20892426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
92, 110
               

               
Conread position:
               
368-479
               

               
Cow position:
               
chr20:6765104-6765213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
86, 23
               
Show alignments to all cow chromosomes.