Cow genome map

Conread name: Ss1.1-rspc025_m8.5

Conread position: 1-278
Cow position: chr10:13222329-13222052 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 186
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 141, 15

Conread position: 1-421
Cow position: chr10:63626824-63626416 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 279
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 81

Conread position: 1-579
Cow position: chr10:58671846-58672445 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 41

Conread position: 3-283
Cow position: chr10:5448118-5448407 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 194
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 200

Conread position: 3-284
Cow position: chr10:49432794-49432504 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 39

Conread position: 3-296
Cow position: chr10:29174916-29174606 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 19, 32

Conread position: 3-302
Cow position: chr10:3114650-3114333 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 76

Conread position: 3-302
Cow position: chr10:22617359-22617656 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 195
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 19, 126

Conread position: 3-303
Cow position: chr10:59347351-59347033 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 3-548
Cow position: chr10:6539471-6538890 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 360
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 19, 323

Conread position: 3-579
Cow position: chr10:8293824-8293205 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 394
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 367

Conread position: 3-580
Cow position: chr10:21490618-21490012 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 379
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 19, 207

Conread position: 3-580
Cow position: chr10:34664088-34664695 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 377
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 19, 332

Conread position: 4-299
Cow position: chr10:924418-924726 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 214
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 20, 35

Conread position: 4-302
Cow position: chr10:25259400-25259094 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 207
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 197

Conread position: 4-302
Cow position: chr10:28775518-28775211 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 201
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 34

Conread position: 4-302
Cow position: chr10:61323388-61323071 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 207
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 4-303
Cow position: chr10:45484317-45484633 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 207
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 4-305
Cow position: chr10:44866567-44866241 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 215
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 4-408
Cow position: chr10:57295993-57296411 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 273
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 16, 37

Conread position: 4-421
Cow position: chr10:7652457-7652024 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 293
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 19, 44

Conread position: 4-456
Cow position: chr10:48954207-48953755 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 294
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 9

Conread position: 4-481
Cow position: chr10:25579557-25580049 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 312
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 28, 39

Conread position: 4-560
Cow position: chr10:53914199-53913641 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 381
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 8, 154

Conread position: 4-563
Cow position: chr10:8682317-8681715 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 377
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 18, 317

Conread position: 4-564
Cow position: chr10:58937953-58938551 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 371
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 90

Conread position: 4-569
Cow position: chr10:45309536-45310124 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 107

Conread position: 4-576
Cow position: chr10:48162661-48162057 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 397
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 19, 52

Conread position: 4-579
Cow position: chr10:39441856-39441245 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 388
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 72

Conread position: 4-579
Cow position: chr10:57743883-57743283 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 397
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 118, 36

Conread position: 5-421
Cow position: chr10:24099456-24099896 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 279
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 233

Conread position: 7-296
Cow position: chr10:24743654-24743349 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 7-302
Cow position: chr10:31534126-31533818 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 7-303
Cow position: chr10:29185119-29184811 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 65

Conread position: 7-451
Cow position: chr10:48824227-48823753 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 302
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 114, 380

Conread position: 7-511
Cow position: chr10:4337477-4338001 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 364

Conread position: 8-353
Cow position: chr10:47825916-47826258 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 229
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 69

Conread position: 8-579
Cow position: chr10:1434808-1434206 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 380
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 15, 232

Conread position: 8-579
Cow position: chr10:60703357-60703953 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 394
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 15, 76

Conread position: 9-584
Cow position: chr10:57509329-57508740 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 373
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 120, 31

Conread position: 10-258
Cow position: chr10:9626782-9627041 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 10-281
Cow position: chr10:27174035-27174312 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 70

Conread position: 10-563
Cow position: chr10:56293765-56293223 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 353
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 15, 102

Conread position: 11-366
Cow position: chr10:25979233-25978858 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 259
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 10

Conread position: 13-297
Cow position: chr10:32835259-32834968 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 108, 132

Conread position: 13-517
Cow position: chr10:3784100-3783569 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 339
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 8, 29

Conread position: 14-437
Cow position: chr10:33265787-33266212 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 277
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 206, 113

Conread position: 14-563
Cow position: chr10:38866861-38866295 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 357
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 106, 136

Conread position: 17-241
Cow position: chr10:51409021-51408798 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 103, 81

Conread position: 17-305
Cow position: chr10:66207557-66207259 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 200
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 97, 284

Conread position: 17-306
Cow position: chr10:2737863-2737558 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 206
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 99, 247

Conread position: 17-323
Cow position: chr10:61497822-61497510 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 54, 62

Conread position: 17-325
Cow position: chr10:51427123-51426803 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 224
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 16

Conread position: 17-565
Cow position: chr10:49184874-49185453 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 367
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 11, 26

Conread position: 17-577
Cow position: chr10:64347639-64347048 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 375
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 102, 160

Conread position: 27-453
Cow position: chr10:34684335-34683895 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 288
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 94, 38

Conread position: 36-447
Cow position: chr10:39044790-39044377 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 272
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 85, 37

Conread position: 37-439
Cow position: chr10:40820120-40820532 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 275
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 82

Conread position: 37-566
Cow position: chr10:56450519-56449987 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 351
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 35

Conread position: 41-580
Cow position: chr10:12937876-12937330 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 366
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 29, 38

Conread position: 42-257
Cow position: chr10:16455983-16456203 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 13

Conread position: 42-542
Cow position: chr10:282460-282987 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 337
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 77, 50

Conread position: 45-557
Cow position: chr10:55098305-55098847 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 339
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 36

Conread position: 46-579
Cow position: chr10:42276324-42275773 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 354
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 66

Conread position: 47-579
Cow position: chr10:54975674-54976214 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 363
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 74, 45

Conread position: 55-259
Cow position: chr10:13789895-13789673 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 57-558
Cow position: chr10:3983183-3983716 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 340
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 40, 319

Conread position: 70-460
Cow position: chr10:34876498-34876092 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 258
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 8

Conread position: 116-302
Cow position: chr10:47553440-47553628 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 14

Conread position: 116-579
Cow position: chr10:43848709-43848236 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 298
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 172

Conread position: 117-587
Cow position: chr10:24782354-24782835 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 307
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 102, 186

Conread position: 123-580
Cow position: chr10:54151828-54151359 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 324
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 56

Conread position: 125-302
Cow position: chr10:60000006-59999828 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 159, 0

Conread position: 125-304
Cow position: chr10:53058752-53058931 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 10

Conread position: 129-330
Cow position: chr10:43164303-43164513 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 85

Conread position: 129-579
Cow position: chr10:43262070-43262547 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 309
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 69, 317

Conread position: 130-453
Cow position: chr10:68826401-68826722 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 98, 106

Conread position: 131-326
Cow position: chr10:23508398-23508599 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 83, 113

Conread position: 137-592
Cow position: chr10:3895241-3895710 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 314
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 54

Conread position: 148-535
Cow position: chr10:23172282-23171868 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 275
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 86, 219

Conread position: 154-592
Cow position: chr10:8365230-8365672 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 299
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 67, 116

Conread position: 158-579
Cow position: chr10:24293500-24293915 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 267
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 11

Conread position: 163-418
Cow position: chr10:60533149-60533412 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 165-565
Cow position: chr10:57368579-57368984 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 272
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 57, 73

Conread position: 177-386
Cow position: chr10:28721023-28720812 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 51

Conread position: 194-578
Cow position: chr10:39649984-39650393 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 272
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 30, 186

Conread position: 247-579
Cow position: chr10:23139516-23139177 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 222
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 216

Show alignments to all cow chromosomes.