Cow genome map


           Conread name:
           Ss1.1-rspc025_m8.5
        

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-278
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               14, 143
               

               Conread position:
               1-292
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-303
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               21, 100
               

               Conread position:
               1-562
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               384
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               21, 88
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               113, 13
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 81
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               57, 68
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               19, 79
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               19, 200
               

               Conread position:
               3-304
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               19, 61
               

               Conread position:
               3-326
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               9, 314
               

               Conread position:
               3-442
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               19, 197
               

               Conread position:
               3-451
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               309
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               19, 35
               

               Conread position:
               3-453
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               304
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               23, 373
               

               Conread position:
               3-456
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 144
               

               Conread position:
               3-577
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               377
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               15, 156
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               382
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               19, 61
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               381
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               19, 420
               

               Conread position:
               3-587
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               395
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               19, 35
               

               Conread position:
               4-259
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 145
               

               Conread position:
               4-295
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-296
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 256
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               18, 78
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               15, 53
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-330
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               19, 68
               

               Conread position:
               4-407
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               274
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               14, 74
               

               Conread position:
               4-437
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               285
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               124, 32
               

               Conread position:
               4-451
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               304
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 361
               

               Conread position:
               4-453
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               4-454
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 101
               

               Conread position:
               4-458
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               304
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               15, 62
               

               Conread position:
               4-526
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               358
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 366
               

               Conread position:
               4-545
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               359
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               18, 220
               

               Conread position:
               5-451
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               7-232
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               16, 76
               

               Conread position:
               7-256
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               114, 9
               

               Conread position:
               7-302
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               16, 5
               

               Conread position:
               7-321
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               16, 40
               

               Conread position:
               7-394
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               15, 281
               

               Conread position:
               7-464
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               308
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               16, 243
               

               Conread position:
               7-474
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               301
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               7-560
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               372
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               15, 35
               

               Conread position:
               7-567
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               382
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               114, 74
               

               Conread position:
               8-564
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               381
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               15, 56
               

               Conread position:
               9-318
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               14, 145
               

               Conread position:
               10-309
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               110, 29
               

               Conread position:
               10-580
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               391
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               25, 34
               

               Conread position:
               13-242
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               5, 63
               

               Conread position:
               13-408
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               277
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               9, 217
               

               Conread position:
               13-453
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               279
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               9, 177
               

               Conread position:
               14-411
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               283
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               14-453
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               316
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               107, 169
               

               Conread position:
               14-557
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               385
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               106, 25
               

               Conread position:
               15-471
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 16
               

               Conread position:
               17-302
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               104, 46
               

               Conread position:
               17-318
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               104, 59
               

               Conread position:
               17-328
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               91, 25
               

               Conread position:
               17-533
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 243
               

               Conread position:
               17-576
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               360
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               104, 87
               

               Conread position:
               17-580
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               392
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               103, 25
               

               Conread position:
               17-592
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               386
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               119, 91
               

               Conread position:
               21-303
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               65, 254
               

               Conread position:
               22-437
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               98, 132
               

               Conread position:
               23-437
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               50, 55
               

               Conread position:
               24-299
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               15, 158
               

               Conread position:
               42-328
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               75, 205
               

               Conread position:
               42-462
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               280
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               78, 216
               

               Conread position:
               42-565
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               370
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               32, 37
               

               Conread position:
               46-579
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               351
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               67, 30
               

               Conread position:
               47-567
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               368
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               28, 206
               

               Conread position:
               47-579
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               332
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               22, 30
               

               Conread position:
               50-278
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               66, 160
               

               Conread position:
               50-441
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               65, 173
               

               Conread position:
               50-441
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               269
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               70, 288
               

               Conread position:
               52-301
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               170, 76
               

               Conread position:
               65-458
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               266
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               74-388
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               46, 130
               

               Conread position:
               81-330
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 187
               

               Conread position:
               85-303
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               137, 40
               

               Conread position:
               85-552
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               312
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               137, 43
               

               Conread position:
               86-451
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               264
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               38, 177
               

               Conread position:
               116-579
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               311
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               117-444
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               98, 194
               

               Conread position:
               120-578
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               310
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               129-507
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               151, 97
               

               Conread position:
               130-280
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               97, 109
               

               Conread position:
               130-319
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 141
               

               Conread position:
               131-394
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               43, 22
               

               Conread position:
               145-432
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               71, 96
               

               Conread position:
               153-556
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               130, 220
               

               Conread position:
               161-462
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               61, 107
               

               Conread position:
               168-581
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               172-561
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               50, 58
               

               Conread position:
               226-542
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               57, 144
               
Show alignments to all cow chromosomes.