Cow genome map


           Conread name:
           Ss1.1-rspc025_m8.5
        

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 77
               

               Conread position:
               1-303
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               1-557
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               375
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               21, 164
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 100
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               3-303
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               3-450
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               311
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 75
               

               Conread position:
               3-451
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               294
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               3-452
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               366
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               18, 337
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               373
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               4-255
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               4-278
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               14, 28
               

               Conread position:
               4-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 125
               

               Conread position:
               4-299
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               112, 28
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               4-307
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 35
               

               Conread position:
               4-364
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 74
               

               Conread position:
               4-448
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               284
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               8, 78
               

               Conread position:
               4-462
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               324
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               105, 169
               

               Conread position:
               5-305
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               23, 40
               

               Conread position:
               6-299
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               16, 78
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               102, 98
               

               Conread position:
               7-298
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               11, 72
               

               Conread position:
               7-305
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               15, 217
               

               Conread position:
               7-454
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               301
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 30
               

               Conread position:
               7-579
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               390
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               16, 227
               

               Conread position:
               7-579
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 37
               

               Conread position:
               8-329
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 37
               

               Conread position:
               8-407
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               88, 8
               

               Conread position:
               8-417
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               60, 76
               

               Conread position:
               8-579
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               376
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               113, 44
               

               Conread position:
               11-212
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               34, 197
               

               Conread position:
               14-550
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               351
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               82, 113
               

               Conread position:
               17-259
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               17-294
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               81, 23
               

               Conread position:
               17-454
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               125, 68
               

               Conread position:
               17-500
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               328
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               205, 68
               

               Conread position:
               17-558
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               367
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               98, 40
               

               Conread position:
               19-393
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               101, 14
               

               Conread position:
               24-305
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               97, 115
               

               Conread position:
               29-258
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               92, 130
               

               Conread position:
               35-565
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               376
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               89, 73
               

               Conread position:
               38-306
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               5, 48
               

               Conread position:
               46-304
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               75, 30
               

               Conread position:
               51-305
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               171, 79
               

               Conread position:
               59-592
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               348
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               70, 166
               

               Conread position:
               85-579
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               345
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 89
               

               Conread position:
               116-560
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               323
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               106, 7
               

               Conread position:
               117-316
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               123-330
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 7
               

               Conread position:
               125-459
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               59, 249
               

               Conread position:
               129-460
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               93, 80
               

               Conread position:
               130-457
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               38, 85
               

               Conread position:
               149-445
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               68, 232
               

               Conread position:
               149-593
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               297
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               75, 116
               

               Conread position:
               155-443
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               69, 210
               

               Conread position:
               164-465
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               14, 31
               
Show alignments to all cow chromosomes.