Cow genome map


           Conread name:
           Ss1.1-rspc025_m8.5
        

               Conread position:
               1-439
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               307
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               22, 33
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               311
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               22, 43
               

               Conread position:
               3-255
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 29
               

               Conread position:
               3-303
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               107, 13
               

               Conread position:
               3-305
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               22, 76
               

               Conread position:
               3-349
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               20, 75
               

               Conread position:
               3-462
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               303
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               19, 68
               

               Conread position:
               3-464
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               313
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               219, 99
               

               Conread position:
               3-531
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               350
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               19, 141
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               363
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               19, 249
               

               Conread position:
               3-557
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               374
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               20, 315
               

               Conread position:
               3-561
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               369
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               19, 383
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               363
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               19, 164
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               374
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 274
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 124
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 272
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               18, 112
               

               Conread position:
               4-318
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-330
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               227
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               129, 12
               

               Conread position:
               4-451
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 367
               

               Conread position:
               4-457
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               8, 37
               

               Conread position:
               4-567
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               372
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               18, 379
               

               Conread position:
               4-579
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 104
               

               Conread position:
               4-580
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               382
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               18, 357
               

               Conread position:
               5-563
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               378
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               18, 172
               

               Conread position:
               7-302
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               7-303
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 100
               

               Conread position:
               7-367
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               7-394
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               16, 256
               

               Conread position:
               7-444
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               280
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               9, 124
               

               Conread position:
               7-451
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               99, 43
               

               Conread position:
               8-299
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               8-302
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               14, 65
               

               Conread position:
               8-567
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               384
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               25, 30
               

               Conread position:
               8-577
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               367
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               10, 107
               

               Conread position:
               9-431
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               14, 70
               

               Conread position:
               13-579
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               375
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               8, 26
               

               Conread position:
               14-292
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               16-451
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               103, 61
               

               Conread position:
               17-318
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               99, 177
               

               Conread position:
               17-321
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               100, 222
               

               Conread position:
               17-421
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               57, 376
               

               Conread position:
               17-421
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               58, 62
               

               Conread position:
               17-444
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               104, 126
               

               Conread position:
               17-578
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               396
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               88, 174
               

               Conread position:
               20-578
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               382
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               112, 8
               

               Conread position:
               21-303
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               10, 25
               

               Conread position:
               35-316
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               35-324
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               86, 161
               

               Conread position:
               42-409
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               77, 164
               

               Conread position:
               42-414
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               257
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               79, 143
               

               Conread position:
               44-330
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               44-453
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               58, 221
               

               Conread position:
               45-330
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               66, 12
               

               Conread position:
               55-303
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               65, 216
               

               Conread position:
               55-579
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               340
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               67, 22
               

               Conread position:
               55-579
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               358
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               15, 23
               

               Conread position:
               58-346
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 36
               

               Conread position:
               59-295
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 216
               

               Conread position:
               85-572
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               330
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               42, 274
               

               Conread position:
               99-451
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               96, 126
               

               Conread position:
               117-580
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               308
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               104, 158
               

               Conread position:
               124-578
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               301
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               100, 129
               

               Conread position:
               129-457
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               154, 230
               

               Conread position:
               129-579
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               301
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               93, 142
               

               Conread position:
               130-448
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               153, 55
               

               Conread position:
               131-470
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               92, 132
               

               Conread position:
               132-580
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               286
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               90, 240
               

               Conread position:
               149-592
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               304
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               75, 63
               

               Conread position:
               155-394
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 27
               

               Conread position:
               169-517
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               79, 52
               

               Conread position:
               189-453
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               36, 64
               
Show alignments to all cow chromosomes.