Cow genome map


           Conread name:
           Ss1.1-rspc025_m8.5
        

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               21, 169
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               21, 116
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 138
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 253
               

               Conread position:
               1-492
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               316
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 53
               

               Conread position:
               3-282
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 76
               

               Conread position:
               3-285
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-295
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 79
               

               Conread position:
               3-442
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 18
               

               Conread position:
               3-448
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               318
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               18, 30
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               386
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               19, 255
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               386
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 363
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               385
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               19, 213
               

               Conread position:
               3-580
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               384
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 363
               

               Conread position:
               4-203
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               4-257
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               18, 60
               

               Conread position:
               4-277
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 232
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 78
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               18, 42
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               271
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               18, 124
               

               Conread position:
               4-451
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               304
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 367
               

               Conread position:
               6-294
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 74
               

               Conread position:
               7-288
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               7-293
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               27, 270
               

               Conread position:
               7-294
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               16, 52
               

               Conread position:
               7-302
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               7-303
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               14, 65
               

               Conread position:
               7-303
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               15, 59
               

               Conread position:
               7-392
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               12, 73
               

               Conread position:
               7-444
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 133
               

               Conread position:
               7-462
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               299
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               7-507
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               346
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               114, 9
               

               Conread position:
               8-302
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               9-220
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               50, 7
               

               Conread position:
               9-242
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               10-274
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               108, 165
               

               Conread position:
               10-303
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               10, 99
               

               Conread position:
               10-556
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               388
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               12, 31
               

               Conread position:
               11-580
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               382
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               110, 180
               

               Conread position:
               17-299
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               90, 182
               

               Conread position:
               17-303
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               130, 64
               

               Conread position:
               17-323
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               112, 165
               

               Conread position:
               17-451
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               102, 180
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               384
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               104, 540
               

               Conread position:
               39-328
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               77, 185
               

               Conread position:
               40-303
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 23
               

               Conread position:
               42-303
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               42-303
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               108, 19
               

               Conread position:
               42-456
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 221
               

               Conread position:
               43-332
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               38, 43
               

               Conread position:
               44-462
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               264
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               26, 33
               

               Conread position:
               58-218
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               62-329
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               59, 179
               

               Conread position:
               99-307
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 5
               

               Conread position:
               115-461
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               168, 20
               

               Conread position:
               119-579
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               299
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               98, 256
               

               Conread position:
               123-452
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               11, 117
               

               Conread position:
               125-563
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               63, 130
               

               Conread position:
               125-573
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               304
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               16, 180
               

               Conread position:
               128-464
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 33
               

               Conread position:
               129-470
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               93, 80
               

               Conread position:
               129-517
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               59, 97
               

               Conread position:
               130-303
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               130-509
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               88, 244
               

               Conread position:
               131-330
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               86, 27
               

               Conread position:
               148-550
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               268
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               66, 5
               

               Conread position:
               157-431
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               65, 87
               

               Conread position:
               169-563
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               53, 170
               

               Conread position:
               182-446
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               30, 87
               
Show alignments to all cow chromosomes.