Cow genome map


           Conread name:
           Ss1.1-rspc025_m8.5
        

               Conread position:
               1-562
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               359
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               21, 111
               

               Conread position:
               1-580
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               390
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               21, 159
               

               Conread position:
               3-296
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-296
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-402
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               264
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               41, 28
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 37
               

               Conread position:
               4-261
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               18, 60
               

               Conread position:
               4-297
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 132
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-329
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               117, 189
               

               Conread position:
               4-330
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               117, 94
               

               Conread position:
               4-442
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 379
               

               Conread position:
               4-451
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               302
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               18, 100
               

               Conread position:
               4-453
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               296
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               18, 269
               

               Conread position:
               4-457
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               317
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               18, 280
               

               Conread position:
               4-565
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               368
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               7-235
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               15, 93
               

               Conread position:
               7-284
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 63
               

               Conread position:
               7-332
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               105, 281
               

               Conread position:
               7-394
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               260
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               15, 69
               

               Conread position:
               8-258
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               113, 45
               

               Conread position:
               8-281
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               14, 144
               

               Conread position:
               8-294
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               14, 32
               

               Conread position:
               8-301
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               115, 55
               

               Conread position:
               11-302
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 81
               

               Conread position:
               11-348
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               8, 97
               

               Conread position:
               14-303
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               42, 64
               

               Conread position:
               14-330
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               14-465
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               294
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               14, 31
               

               Conread position:
               21-302
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               101, 60
               

               Conread position:
               22-232
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               114, 12
               

               Conread position:
               37-509
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               325
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               74, 19
               

               Conread position:
               43-299
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               22, 127
               

               Conread position:
               43-453
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               287
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               77, 39
               

               Conread position:
               44-321
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               50-303
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               56-330
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 213
               

               Conread position:
               90-454
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               105, 26
               

               Conread position:
               92-294
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               116-462
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               91, 9
               

               Conread position:
               117-561
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               296
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               106, 43
               

               Conread position:
               129-312
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               86, 174
               

               Conread position:
               129-455
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               80, 98
               

               Conread position:
               130-303
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               130-453
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               92, 208
               

               Conread position:
               130-556
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               93, 36
               

               Conread position:
               130-579
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               92, 128
               

               Conread position:
               131-454
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               88, 102
               

               Conread position:
               135-549
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               87, 29
               

               Conread position:
               152-453
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               72, 49
               

               Conread position:
               166-565
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               259
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               56, 88
               

               Conread position:
               171-324
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               171-449
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 196
               

               Conread position:
               172-557
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               266
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               50, 26
               

               Conread position:
               290-560
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               8, 22
               

               Conread position:
               382-592
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 119
               
Show alignments to all cow chromosomes.