Cow genome map

Conread name: Ss1.1-rspc025_m8.5

Conread position: 1-291
Cow position: chr22:8268049-8267757 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 194
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 82

Conread position: 1-302
Cow position: chr22:2560851-2561158 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 74

Conread position: 1-302
Cow position: chr22:30963514-30963205 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 79

Conread position: 1-451
Cow position: chr22:7596378-7595908 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 298
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 371

Conread position: 3-263
Cow position: chr22:556710-556979 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 180
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 188

Conread position: 3-283
Cow position: chr22:6622848-6623125 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 186
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 19, 126

Conread position: 3-287
Cow position: chr22:43279860-43280163 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 198
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 3-302
Cow position: chr22:11988097-11988401 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 79

Conread position: 3-446
Cow position: chr22:9048216-9047771 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 288
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 75

Conread position: 3-452
Cow position: chr22:25968053-25968518 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 302
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 17, 353

Conread position: 3-462
Cow position: chr22:35934348-35934836 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 307
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 213

Conread position: 3-548
Cow position: chr22:29397702-29397118 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 377
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 19, 363

Conread position: 3-562
Cow position: chr22:15920223-15920809 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 367
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 97

Conread position: 3-579
Cow position: chr22:33951339-33951947 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 376
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 4-275
Cow position: chr22:9119277-9118995 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 71

Conread position: 4-287
Cow position: chr22:36188663-36188372 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 185
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 4-292
Cow position: chr22:38251938-38251635 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 80

Conread position: 4-302
Cow position: chr22:28996688-28997005 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 206
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 4-302
Cow position: chr22:33200893-33200584 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 197
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 154

Conread position: 4-303
Cow position: chr22:14490755-14490441 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 0

Conread position: 4-437
Cow position: chr22:12060191-12060651 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 304
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 8, 174

Conread position: 4-506
Cow position: chr22:35692290-35692799 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 328
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 155

Conread position: 4-512
Cow position: chr22:45606898-45607437 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 351
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 179

Conread position: 4-550
Cow position: chr22:8776097-8776686 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 371
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 18, 367

Conread position: 4-563
Cow position: chr22:20569421-20570022 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 377
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 366

Conread position: 4-569
Cow position: chr22:13826183-13826777 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 378
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 15, 10

Conread position: 4-579
Cow position: chr22:33403075-33403657 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 383
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 37

Conread position: 7-292
Cow position: chr22:41961490-41961782 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 36

Conread position: 7-452
Cow position: chr22:14509909-14510375 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 296
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 15, 373

Conread position: 7-578
Cow position: chr22:36357667-36357061 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 377
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 63, 72

Conread position: 8-278
Cow position: chr22:37726798-37726513 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 15, 223

Conread position: 8-302
Cow position: chr22:2415506-2415202 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 197
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 42

Conread position: 8-302
Cow position: chr22:11127703-11127395 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 203
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 8-302
Cow position: chr22:11231681-11231989 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 203
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 8-579
Cow position: chr22:23104987-23105585 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 382
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 10, 48

Conread position: 8-579
Cow position: chr22:23207022-23207606 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 158

Conread position: 9-316
Cow position: chr22:37996689-37997002 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 209
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 106

Conread position: 10-299
Cow position: chr22:33436569-33436869 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 208
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 88

Conread position: 10-580
Cow position: chr22:12534730-12535306 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 354
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 9, 53

Conread position: 12-244
Cow position: chr22:17006866-17006620 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 162

Conread position: 13-451
Cow position: chr22:38553828-38553379 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 278
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 103

Conread position: 13-456
Cow position: chr22:37046816-37047265 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 289
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 10, 214

Conread position: 14-323
Cow position: chr22:6229149-6229473 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 208
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 5, 178

Conread position: 14-563
Cow position: chr22:36156549-36157109 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 364
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 92, 252

Conread position: 17-303
Cow position: chr22:32304399-32304115 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 105, 126

Conread position: 17-330
Cow position: chr22:43566902-43567233 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 226
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 104, 248

Conread position: 17-578
Cow position: chr22:30065731-30066319 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 368
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 19

Conread position: 17-579
Cow position: chr22:38247371-38247953 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 375
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 119, 65

Conread position: 30-248
Cow position: chr22:40259952-40259729 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 53

Conread position: 33-442
Cow position: chr22:14484495-14484075 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 288
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 40, 55

Conread position: 41-305
Cow position: chr22:11599832-11599565 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 177
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 113

Conread position: 42-303
Cow position: chr22:24146646-24146373 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 79, 29

Conread position: 42-412
Cow position: chr22:39307751-39307366 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 261
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 75, 46

Conread position: 44-414
Cow position: chr22:304534-304151 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 243
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 75, 202

Conread position: 44-440
Cow position: chr22:12631262-12631676 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 267
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 79, 326

Conread position: 44-580
Cow position: chr22:8646213-8646769 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 368
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 97, 19

Conread position: 50-454
Cow position: chr22:32997533-32997103 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 280
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 138

Conread position: 114-578
Cow position: chr22:41035199-41034725 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 309
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 21, 134

Conread position: 117-580
Cow position: chr22:41170382-41169898 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 302
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 15, 204

Conread position: 121-452
Cow position: chr22:4709849-4710195 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 230
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 105, 14

Conread position: 129-565
Cow position: chr22:8194771-8194334 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 296
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 96, 168

Conread position: 130-299
Cow position: chr22:15656350-15656518 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 95

Conread position: 130-565
Cow position: chr22:6495859-6495412 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 287
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 85, 40

Conread position: 132-453
Cow position: chr22:16817919-16817596 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 212
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 90, 26

Conread position: 135-437
Cow position: chr22:23305213-23305517 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 30

Conread position: 148-557
Cow position: chr22:14508678-14509104 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 281
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 21

Conread position: 163-534
Cow position: chr22:7444985-7445368 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 252
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 30

Conread position: 169-449
Cow position: chr22:33219627-33219337 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 197
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 52, 202

Show alignments to all cow chromosomes.