Cow genome map

Conread name: Ss1.1-rspc025_m8.5

Conread position: 1-391
Cow position: chr23:28890154-28890573 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 279
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 39

Conread position: 1-557
Cow position: chr23:15038717-15039286 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 352
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 66

Conread position: 3-291
Cow position: chr23:40553526-40553815 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 187
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 112

Conread position: 3-302
Cow position: chr23:1535731-1535420 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 200
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 3-302
Cow position: chr23:12864303-12863998 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 197
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 248

Conread position: 3-305
Cow position: chr23:15215235-15215548 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 198
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 3-455
Cow position: chr23:9393279-9393726 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 284
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 97

Conread position: 3-456
Cow position: chr23:7129540-7129992 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 308
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 19, 196

Conread position: 3-579
Cow position: chr23:2023473-2024088 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 384
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 19, 359

Conread position: 3-579
Cow position: chr23:11344108-11343493 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 387
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 359

Conread position: 3-579
Cow position: chr23:28915943-28915331 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 397
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 282

Conread position: 4-302
Cow position: chr23:4581640-4581323 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 206
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 4-302
Cow position: chr23:19056747-19057055 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 200
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 140

Conread position: 4-302
Cow position: chr23:41015543-41015226 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 205
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 4-303
Cow position: chr23:12003674-12003376 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 205
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 76

Conread position: 4-439
Cow position: chr23:13820148-13820601 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 299
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 120

Conread position: 4-500
Cow position: chr23:18446659-18446140 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 356
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 112, 57

Conread position: 4-550
Cow position: chr23:22143696-22144283 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 377
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 317

Conread position: 4-579
Cow position: chr23:7249512-7250098 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 30

Conread position: 5-305
Cow position: chr23:12978358-12978047 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 199
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 107

Conread position: 7-309
Cow position: chr23:13409960-13409652 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 201
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 38

Conread position: 8-414
Cow position: chr23:18248810-18248389 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 277
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 174

Conread position: 13-288
Cow position: chr23:34271563-34271282 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 9, 51

Conread position: 13-359
Cow position: chr23:14190556-14190207 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 13, 163

Conread position: 13-551
Cow position: chr23:250209-250781 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 384
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 9, 58

Conread position: 13-579
Cow position: chr23:9228984-9228398 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 373
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 48

Conread position: 14-582
Cow position: chr23:34589020-34589597 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 388
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 12, 157

Conread position: 17-270
Cow position: chr23:30857531-30857781 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 108, 45

Conread position: 17-326
Cow position: chr23:9261900-9262221 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 111, 59

Conread position: 17-329
Cow position: chr23:36184404-36184724 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 215
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 104, 22

Conread position: 17-418
Cow position: chr23:8323353-8322934 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 268
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 242

Conread position: 17-433
Cow position: chr23:35280935-35281364 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 279
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 9

Conread position: 17-445
Cow position: chr23:10424509-10424080 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 272
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 61

Conread position: 17-579
Cow position: chr23:30633997-30634598 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 381
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 104, 349

Conread position: 18-453
Cow position: chr23:30837973-30838419 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 286
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 25

Conread position: 21-435
Cow position: chr23:26060499-26060909 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 278
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 135, 43

Conread position: 23-302
Cow position: chr23:29447664-29447953 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 188
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 95, 189

Conread position: 29-418
Cow position: chr23:11967857-11967468 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 247
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 83, 73

Conread position: 32-443
Cow position: chr23:25030587-25031010 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 283
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 40

Conread position: 39-555
Cow position: chr23:10914195-10913654 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 160

Conread position: 42-294
Cow position: chr23:10955839-10955574 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 165

Conread position: 42-432
Cow position: chr23:40217793-40217384 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 273
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 185

Conread position: 113-453
Cow position: chr23:8316155-8315803 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 237
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 9, 258

Conread position: 121-580
Cow position: chr23:11385568-11386051 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 318
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 110

Conread position: 129-509
Cow position: chr23:16219108-16218716 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 250
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 95, 351

Conread position: 132-330
Cow position: chr23:31136705-31136908 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 133

Conread position: 133-441
Cow position: chr23:1950732-1950418 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 157

Conread position: 149-330
Cow position: chr23:8443047-8443235 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 151-579
Cow position: chr23:9608328-9607897 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 287
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 276, 74

Show alignments to all cow chromosomes.