Cow genome map


           Conread name:
           Ss1.1-rspc025_m8.5
        

               Conread position:
               1-544
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               359
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               114, 81
               

               Conread position:
               3-281
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               3-299
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               19, 252
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               19, 155
               

               Conread position:
               3-303
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               21, 75
               

               Conread position:
               3-303
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               3-448
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               300
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 247
               

               Conread position:
               3-452
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               321
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               14, 270
               

               Conread position:
               3-566
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               385
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 219
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               392
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               19, 272
               

               Conread position:
               4-256
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               18, 252
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-305
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-306
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 265
               

               Conread position:
               4-388
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 52
               

               Conread position:
               4-456
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 149
               

               Conread position:
               4-467
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               314
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               4-509
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               339
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               16, 381
               

               Conread position:
               4-563
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               372
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               18, 383
               

               Conread position:
               4-579
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 65
               

               Conread position:
               4-579
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               375
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               7-259
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               15, 72
               

               Conread position:
               7-293
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               7-299
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               120, 9
               

               Conread position:
               7-302
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               7-303
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               209
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               11, 34
               

               Conread position:
               7-453
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               314
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 60
               

               Conread position:
               7-552
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               371
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               16, 331
               

               Conread position:
               7-581
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               392
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               16, 65
               

               Conread position:
               8-303
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               15, 220
               

               Conread position:
               8-303
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               8-318
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               9-451
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               302
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               18, 230
               

               Conread position:
               13-579
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 70
               

               Conread position:
               17-302
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               98, 46
               

               Conread position:
               17-394
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 65
               

               Conread position:
               17-453
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               295
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               17-565
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               378
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               100, 55
               

               Conread position:
               19-556
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               367
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               8, 59
               

               Conread position:
               22-294
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               83, 209
               

               Conread position:
               37-394
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 93
               

               Conread position:
               42-318
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               15, 8
               

               Conread position:
               42-509
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               316
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               181, 69
               

               Conread position:
               42-557
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               347
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               79, 354
               

               Conread position:
               43-277
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               65, 39
               

               Conread position:
               55-303
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               90, 175
               

               Conread position:
               86-580
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               343
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               31, 16
               

               Conread position:
               94-580
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               325
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               129, 11
               

               Conread position:
               114-580
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               321
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               8, 226
               

               Conread position:
               121-318
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               21, 46
               

               Conread position:
               125-423
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 10
               

               Conread position:
               129-446
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               90, 209
               

               Conread position:
               129-464
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               95, 24
               

               Conread position:
               150-550
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               73, 147
               

               Conread position:
               154-302
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               158-579
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               17, 115
               

               Conread position:
               172-580
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               50, 112
               

               Conread position:
               189-579
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               94, 113
               
Show alignments to all cow chromosomes.