Cow genome map
| Conread name: | Ss1.1-rspc025_m8.5 |
| Conread position: | 3-281 |
| Cow position: | chr26:6837269-6836986 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 3-299 |
| Cow position: | chr26:8352385-8352087 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 19, 212 |
| Conread position: | 3-301 |
| Cow position: | chr26:3187411-3187104 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 202 |
| Conread position: | 3-302 |
| Cow position: | chr26:20256279-20255968 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 19, 76 |
| Conread position: | 3-451 |
| Cow position: | chr26:14487604-14488073 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 298 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 88, 78 |
| Conread position: | 4-258 |
| Cow position: | chr26:12249357-12249098 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 20, 60 |
| Conread position: | 4-299 |
| Cow position: | chr26:10124502-10124801 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 14, 119 |
| Conread position: | 4-302 |
| Cow position: | chr26:13183970-13183653 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-305 |
| Cow position: | chr26:20019753-20019441 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-466 |
| Cow position: | chr26:21691712-21692178 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 310 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 18, 71 |
| Conread position: | 4-562 |
| Cow position: | chr26:4440111-4440694 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 359 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 18, 298 |
| Conread position: | 4-568 |
| Cow position: | chr26:5699920-5699324 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 377 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 66, 75 |
| Conread position: | 4-580 |
| Cow position: | chr26:19563688-19564296 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 398 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 117, 21 |
| Conread position: | 7-303 |
| Cow position: | chr26:26281433-26281129 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 109, 51 |
| Conread position: | 7-592 |
| Cow position: | chr26:21414944-21415537 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 400 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 13, 74 |
| Conread position: | 8-309 |
| Cow position: | chr26:17688677-17688997 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 174 |
| Conread position: | 10-318 |
| Cow position: | chr26:17573526-17573205 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 12, 54 |
| Conread position: | 13-256 |
| Cow position: | chr26:17330152-17329898 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 184 |
| Conread position: | 14-579 |
| Cow position: | chr26:892725-892130 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 378 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 107, 67 |
| Conread position: | 17-215 |
| Cow position: | chr26:9245254-9245055 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 56, 67 |
| Conread position: | 17-359 |
| Cow position: | chr26:9642225-9641875 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 326 |
| Conread position: | 17-579 |
| Cow position: | chr26:19468854-19469419 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 391 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 134, 22 |
| Conread position: | 18-453 |
| Cow position: | chr26:17138597-17139043 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 23-418 |
| Cow position: | chr26:35131770-35132181 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 257 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 96, 352 |
| Conread position: | 34-449 |
| Cow position: | chr26:30076444-30076031 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 278 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 188, 49 |
| Conread position: | 35-281 |
| Cow position: | chr26:887748-887487 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 77, 166 |
| Conread position: | 50-302 |
| Cow position: | chr26:25807034-25806769 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 153 |
| Conread position: | 72-411 |
| Cow position: | chr26:24416781-24417133 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 194 |
| Conread position: | 82-271 |
| Cow position: | chr26:12635111-12635309 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 144 |
| Conread position: | 92-543 |
| Cow position: | chr26:16890026-16889552 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 310 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 5, 149 |
| Conread position: | 110-407 |
| Cow position: | chr26:35539468-35539770 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 8, 26 |
| Conread position: | 116-394 |
| Cow position: | chr26:20766139-20765862 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 164, 45 |
| Conread position: | 116-565 |
| Cow position: | chr26:19490739-19490271 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 306 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 101, 106 |
| Conread position: | 129-450 |
| Cow position: | chr26:35149420-35149753 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 69, 160 |
| Conread position: | 133-580 |
| Cow position: | chr26:21807963-21807528 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 297 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 152, 71 |
| Conread position: | 135-318 |
| Cow position: | chr26:22018290-22018474 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 96 |
| Conread position: | 156-509 |
| Cow position: | chr26:12992348-12991977 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 67, 22 |
| Conread position: | 176-415 |
| Cow position: | chr26:26217437-26217191 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 107, 43 |
Show alignments to all cow chromosomes.