Cow genome map
| Conread name: | Ss1.1-rspc025_m8.5 |
| Conread position: | 3-283 |
| Cow position: | chr27:19731215-19731507 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 3-302 |
| Cow position: | chr27:13182674-13182986 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 19, 268 |
| Conread position: | 3-455 |
| Cow position: | chr27:11434778-11434308 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 302 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 19, 96 |
| Conread position: | 3-579 |
| Cow position: | chr27:4982976-4982369 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 380 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 19, 138 |
| Conread position: | 4-302 |
| Cow position: | chr27:1081562-1081864 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 104, 135 |
| Conread position: | 4-302 |
| Cow position: | chr27:3650096-3649779 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 18, 140 |
| Conread position: | 4-302 |
| Cow position: | chr27:12006763-12006446 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-414 |
| Cow position: | chr27:17049835-17050274 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 308 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 7-299 |
| Cow position: | chr27:11256076-11256385 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 112, 272 |
| Conread position: | 7-318 |
| Cow position: | chr27:12554934-12555257 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 16, 101 |
| Conread position: | 7-453 |
| Cow position: | chr27:22586446-22585966 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 317 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 7-562 |
| Cow position: | chr27:2001456-2000859 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 373 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 15, 71 |
| Conread position: | 8-579 |
| Cow position: | chr27:16428267-16427660 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 376 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 113, 91 |
| Conread position: | 13-371 |
| Cow position: | chr27:27152268-27151898 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 227 |
| Conread position: | 13-571 |
| Cow position: | chr27:26577630-26578210 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 391 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 20, 28 |
| Conread position: | 14-461 |
| Cow position: | chr27:29021786-29022248 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 103, 61 |
| Conread position: | 17-302 |
| Cow position: | chr27:16331889-16332181 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 17-440 |
| Cow position: | chr27:4979187-4978754 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 102, 190 |
| Conread position: | 17-443 |
| Cow position: | chr27:12164418-12164862 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 19, 86 |
| Conread position: | 17-451 |
| Cow position: | chr27:23200278-23200719 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 5, 20 |
| Conread position: | 17-464 |
| Cow position: | chr27:22038226-22037751 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 299 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 90, 180 |
| Conread position: | 50-303 |
| Cow position: | chr27:12114909-12115172 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 55, 207 |
| Conread position: | 125-556 |
| Cow position: | chr27:16037490-16037941 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 130-447 |
| Cow position: | chr27:29453816-29454146 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 218 |
Show alignments to all cow chromosomes.