Cow genome map


           Conread name:
           Ss1.1-rspc025_m8.5
        

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 40
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               380
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               2-361
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               20, 228
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 106
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               19, 31
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 45
               

               Conread position:
               3-305
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 311
               

               Conread position:
               3-375
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               18, 317
               

               Conread position:
               3-462
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               299
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               9, 96
               

               Conread position:
               3-548
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               360
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               16, 449
               

               Conread position:
               3-572
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               363
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 97
               

               Conread position:
               3-577
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               379
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               19, 355
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               388
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               20, 30
               

               Conread position:
               4-255
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-296
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               4-475
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               319
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               18, 363
               

               Conread position:
               4-577
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               397
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               18, 174
               

               Conread position:
               7-303
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               16, 207
               

               Conread position:
               7-418
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               293
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               7-436
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               133, 104
               

               Conread position:
               7-565
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               384
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               7-579
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               381
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 76
               

               Conread position:
               7-579
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 57
               

               Conread position:
               8-580
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               377
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               9-437
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               297
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               85, 8
               

               Conread position:
               10-330
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               9, 213
               

               Conread position:
               15-438
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 72
               

               Conread position:
               17-299
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               17-302
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               102, 64
               

               Conread position:
               17-302
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               17-354
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               6, 31
               

               Conread position:
               17-394
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               205, 64
               

               Conread position:
               17-572
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               384
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               104, 361
               

               Conread position:
               21-275
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               100, 57
               

               Conread position:
               42-453
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 59
               

               Conread position:
               42-579
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               345
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               68, 104
               

               Conread position:
               42-579
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               354
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               68, 35
               

               Conread position:
               43-467
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               284
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               30, 37
               

               Conread position:
               44-465
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               285
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               69, 41
               

               Conread position:
               47-306
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               81, 21
               

               Conread position:
               50-302
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               71, 200
               

               Conread position:
               52-296
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               87-435
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               37, 5
               

               Conread position:
               108-577
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               8, 108
               

               Conread position:
               129-444
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               35, 102
               

               Conread position:
               129-518
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               51, 174
               

               Conread position:
               149-562
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               291
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               31, 211
               
Show alignments to all cow chromosomes.