Cow genome map


           Conread name:
           Ss1.1-rspc025_m8.5
        

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-281
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               21, 39
               

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-299
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 228
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               21, 79
               

               Conread position:
               1-446
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               307
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               1-453
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               327
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               22, 81
               

               Conread position:
               1-453
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               297
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               22, 41
               

               Conread position:
               1-480
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               323
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               22, 372
               

               Conread position:
               2-299
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               18, 74
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-292
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               19, 144
               

               Conread position:
               3-292
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-303
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-305
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               18, 308
               

               Conread position:
               3-315
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               15, 79
               

               Conread position:
               3-330
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               3-462
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 258
               

               Conread position:
               3-561
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               377
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 78
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               363
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               21, 42
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 75
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-446
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               307
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               18, 74
               

               Conread position:
               4-453
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               294
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               19, 74
               

               Conread position:
               4-556
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               377
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               117, 12
               

               Conread position:
               4-557
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               372
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               8, 248
               

               Conread position:
               4-579
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 374
               

               Conread position:
               4-579
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               391
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               18, 362
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 143
               

               Conread position:
               7-330
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 168
               

               Conread position:
               7-508
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               354
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               8-294
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               11, 43
               

               Conread position:
               8-303
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               113, 8
               

               Conread position:
               13-330
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               5, 28
               

               Conread position:
               13-579
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               368
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               85, 24
               

               Conread position:
               14-281
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               107, 148
               

               Conread position:
               14-506
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               334
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               107, 258
               

               Conread position:
               17-211
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               17-325
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               91, 266
               

               Conread position:
               17-578
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 60
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               358
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               96, 72
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               363
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               109, 43
               

               Conread position:
               18-287
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               101, 160
               

               Conread position:
               18-442
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 61
               

               Conread position:
               21-446
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               286
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               28-451
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               275
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               90, 280
               

               Conread position:
               42-454
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 347
               

               Conread position:
               42-576
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               375
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               79, 181
               

               Conread position:
               43-302
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               43-442
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 69
               

               Conread position:
               44-278
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               31, 163
               

               Conread position:
               46-284
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 37
               

               Conread position:
               46-298
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               86, 106
               

               Conread position:
               46-303
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               70, 17
               

               Conread position:
               46-417
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               75, 235
               

               Conread position:
               80-450
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               47, 242
               

               Conread position:
               82-304
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               38, 79
               

               Conread position:
               85-456
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 234
               

               Conread position:
               99-446
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               56, 5
               

               Conread position:
               115-453
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               27, 190
               

               Conread position:
               118-563
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               309
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               14, 77
               

               Conread position:
               122-580
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               317
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               115, 129
               

               Conread position:
               129-447
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               90, 240
               

               Conread position:
               130-453
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               92, 113
               

               Conread position:
               131-587
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               293
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               67, 18
               

               Conread position:
               132-587
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               313
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               81, 237
               

               Conread position:
               135-317
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               153-451
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 113
               

               Conread position:
               158-579
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               282
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               74, 87
               
Show alignments to all cow chromosomes.