Cow genome map


           Conread name:
           Ss1.1-rspc025_m8.5
        

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               11, 139
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               19, 81
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-315
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               34, 276
               

               Conread position:
               1-445
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               303
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 37
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 109
               

               Conread position:
               1-534
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               353
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               115, 65
               

               Conread position:
               1-563
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               381
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               21, 227
               

               Conread position:
               1-565
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               385
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               120, 393
               

               Conread position:
               2-281
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               3-242
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               19, 196
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-303
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               3-318
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               16, 48
               

               Conread position:
               3-461
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               303
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 360
               

               Conread position:
               3-462
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               300
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               19, 126
               

               Conread position:
               3-514
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               354
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 365
               

               Conread position:
               3-562
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               381
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               19, 366
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               383
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               19, 362
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               394
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               19, 383
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               391
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               19, 133
               

               Conread position:
               4-299
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 75
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 72
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               18, 36
               

               Conread position:
               4-451
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               297
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               14, 154
               

               Conread position:
               4-466
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               318
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               19, 66
               

               Conread position:
               4-553
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               374
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               66, 75
               

               Conread position:
               4-563
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               375
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               18, 237
               

               Conread position:
               4-600
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               393
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               211, 9
               

               Conread position:
               7-302
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               11, 76
               

               Conread position:
               7-302
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               15, 69
               

               Conread position:
               7-303
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               15, 201
               

               Conread position:
               7-411
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               277
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               16, 31
               

               Conread position:
               7-453
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 62
               

               Conread position:
               7-462
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               303
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 382
               

               Conread position:
               7-466
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               313
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 278
               

               Conread position:
               7-549
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               345
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               86, 18
               

               Conread position:
               8-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               14, 166
               

               Conread position:
               8-432
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               8-565
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               372
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               9-318
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               13-294
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               10, 51
               

               Conread position:
               13-302
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 131
               

               Conread position:
               13-448
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               5, 83
               

               Conread position:
               14-294
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               17-221
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               104, 65
               

               Conread position:
               17-417
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               87, 47
               

               Conread position:
               17-439
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               279
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               17-592
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               378
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               95, 87
               

               Conread position:
               18-453
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               308
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               103, 372
               

               Conread position:
               21-407
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               100, 153
               

               Conread position:
               21-568
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               379
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               52, 63
               

               Conread position:
               23-418
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               101, 38
               

               Conread position:
               29-431
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               101, 82
               

               Conread position:
               32-439
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               272
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               11, 16
               

               Conread position:
               42-293
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               32, 37
               

               Conread position:
               42-583
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               366
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               79, 133
               

               Conread position:
               43-324
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 125
               

               Conread position:
               43-440
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               284
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               78, 151
               

               Conread position:
               43-579
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               362
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               73, 237
               

               Conread position:
               43-579
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               364
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               55-421
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               12, 23
               

               Conread position:
               65-579
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               355
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               58, 164
               

               Conread position:
               77-418
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               58, 25
               

               Conread position:
               112-444
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 237
               

               Conread position:
               113-579
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 255
               

               Conread position:
               114-407
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               108, 40
               

               Conread position:
               115-316
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               17, 36
               

               Conread position:
               117-579
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               317
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               91, 68
               

               Conread position:
               129-346
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               68, 35
               

               Conread position:
               132-451
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               90, 236
               

               Conread position:
               133-302
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               163-579
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               59, 134
               

               Conread position:
               171-453
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 184
               

               Conread position:
               268-553
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               70, 91
               
Show alignments to all cow chromosomes.