Cow genome map


           Conread name:
           Ss1.1-rspc025_m8.5
        

               Conread position:
               1-256
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               22, 47
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               21, 161
               

               Conread position:
               1-345
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 145
               

               Conread position:
               1-453
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 176
               

               Conread position:
               1-565
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               400
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               116, 62
               

               Conread position:
               2-278
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               54, 14
               

               Conread position:
               3-299
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 167
               

               Conread position:
               3-299
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               19, 150
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 69
               

               Conread position:
               3-305
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               20, 202
               

               Conread position:
               3-305
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               19, 126
               

               Conread position:
               3-321
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               20, 59
               

               Conread position:
               3-550
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               368
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               18, 392
               

               Conread position:
               3-562
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               371
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               19, 400
               

               Conread position:
               3-566
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               388
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               15, 90
               

               Conread position:
               3-577
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               378
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               19, 325
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               379
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-586
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               380
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               19, 251
               

               Conread position:
               4-256
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 78
               

               Conread position:
               4-281
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               65, 22
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-302
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-318
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               4-437
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               289
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               18, 36
               

               Conread position:
               4-448
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               319
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 206
               

               Conread position:
               4-452
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               304
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               18, 68
               

               Conread position:
               4-453
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               310
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               30, 7
               

               Conread position:
               4-521
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               320
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               7-302
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               7-347
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               249
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               14, 358
               

               Conread position:
               7-453
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 193
               

               Conread position:
               7-562
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               379
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               7-579
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               383
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               15, 354
               

               Conread position:
               8-302
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               10, 35
               

               Conread position:
               8-353
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               19, 81
               

               Conread position:
               8-412
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               125, 43
               

               Conread position:
               10-302
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               13-302
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 59
               

               Conread position:
               13-517
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               349
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               9, 180
               

               Conread position:
               13-585
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               402
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               14-437
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               107, 137
               

               Conread position:
               14-447
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               295
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               9, 56
               

               Conread position:
               15-318
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               98, 89
               

               Conread position:
               16-299
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               92, 230
               

               Conread position:
               17-291
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               17-302
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               94, 169
               

               Conread position:
               17-394
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               52, 69
               

               Conread position:
               22-441
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               142, 155
               

               Conread position:
               28-394
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               260
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               93, 237
               

               Conread position:
               42-458
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 203
               

               Conread position:
               42-458
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 343
               

               Conread position:
               43-555
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               361
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               79, 125
               

               Conread position:
               43-579
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               360
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               64, 313
               

               Conread position:
               44-302
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               77, 19
               

               Conread position:
               58-318
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               63, 19
               

               Conread position:
               99-288
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               184, 17
               

               Conread position:
               118-579
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               319
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               109, 17
               

               Conread position:
               120-579
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               300
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               107, 65
               

               Conread position:
               125-451
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               92, 128
               

               Conread position:
               129-330
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               93, 173
               

               Conread position:
               130-568
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               87, 111
               

               Conread position:
               156-579
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               297
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               61, 214
               

               Conread position:
               184-462
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               5, 188
               

               Conread position:
               344-579
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               93, 12
               
Show alignments to all cow chromosomes.