Cow genome map

Conread name: Ss1.1-rspc025_m8.5

Conread position: 1-278
Cow position:
Alignm length: 283
Alignm identity: 193
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 24, 81

Conread position: 1-453
Cow position:
Alignm length: 472
Alignm identity: 295
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 110

Conread position: 1-453
Cow position:
Alignm length: 480
Alignm identity: 318
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 19, 286

Conread position: 1-507
Cow position:
Alignm length: 525
Alignm identity: 323
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 314

Conread position: 1-579
Cow position:
Alignm length: 610
Alignm identity: 393
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 71

Conread position: 1-579
Cow position:
Alignm length: 612
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 75

Conread position: 2-451
Cow position:
Alignm length: 474
Alignm identity: 294
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 299

Conread position: 2-454
Cow position:
Alignm length: 471
Alignm identity: 298
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 21, 195

Conread position: 2-579
Cow position:
Alignm length: 595
Alignm identity: 374
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 20, 43

Conread position: 3-245
Cow position:
Alignm length: 252
Alignm identity: 171
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 44

Conread position: 3-277
Cow position:
Alignm length: 286
Alignm identity: 185
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 3-281
Cow position:
Alignm length: 285
Alignm identity: 183
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 102

Conread position: 3-281
Cow position:
Alignm length: 297
Alignm identity: 195
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 3-284
Cow position:
Alignm length: 294
Alignm identity: 194
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 259

Conread position: 3-285
Cow position:
Alignm length: 299
Alignm identity: 195
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 277

Conread position: 3-295
Cow position:
Alignm length: 305
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 3-302
Cow position:
Alignm length: 317
Alignm identity: 207
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 115, 13

Conread position: 3-303
Cow position:
Alignm length: 317
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 259

Conread position: 3-303
Cow position:
Alignm length: 316
Alignm identity: 202
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 148

Conread position: 3-303
Cow position:
Alignm length: 317
Alignm identity: 213
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 109, 0

Conread position: 3-305
Cow position:
Alignm length: 319
Alignm identity: 210
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 225

Conread position: 3-421
Cow position:
Alignm length: 436
Alignm identity: 284
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 20, 37

Conread position: 3-431
Cow position:
Alignm length: 445
Alignm identity: 279
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 48

Conread position: 3-442
Cow position:
Alignm length: 454
Alignm identity: 276
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 317

Conread position: 3-462
Cow position:
Alignm length: 483
Alignm identity: 303
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 47

Conread position: 3-587
Cow position:
Alignm length: 618
Alignm identity: 382
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 47

Conread position: 4-256
Cow position:
Alignm length: 265
Alignm identity: 183
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 18, 155

Conread position: 4-278
Cow position:
Alignm length: 291
Alignm identity: 207
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 18, 192

Conread position: 4-281
Cow position:
Alignm length: 287
Alignm identity: 189
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 44

Conread position: 4-296
Cow position:
Alignm length: 305
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 140

Conread position: 4-299
Cow position:
Alignm length: 314
Alignm identity: 207
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 201

Conread position: 4-302
Cow position:
Alignm length: 318
Alignm identity: 208
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 4-302
Cow position:
Alignm length: 318
Alignm identity: 205
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 4-302
Cow position:
Alignm length: 319
Alignm identity: 208
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 140

Conread position: 4-302
Cow position:
Alignm length: 319
Alignm identity: 209
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 177

Conread position: 4-302
Cow position:
Alignm length: 318
Alignm identity: 206
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 4-303
Cow position:
Alignm length: 315
Alignm identity: 206
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 305

Conread position: 4-303
Cow position:
Alignm length: 315
Alignm identity: 206
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 305

Conread position: 4-303
Cow position:
Alignm length: 315
Alignm identity: 211
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 199

Conread position: 4-305
Cow position:
Alignm length: 315
Alignm identity: 209
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 10, 80

Conread position: 4-328
Cow position:
Alignm length: 351
Alignm identity: 235
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 12

Conread position: 4-411
Cow position:
Alignm length: 434
Alignm identity: 276
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 14, 223

Conread position: 4-419
Cow position:
Alignm length: 445
Alignm identity: 290
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 75

Conread position: 4-436
Cow position:
Alignm length: 447
Alignm identity: 298
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 116, 67

Conread position: 4-447
Cow position:
Alignm length: 470
Alignm identity: 311
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 19, 261

Conread position: 4-451
Cow position:
Alignm length: 483
Alignm identity: 307
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 367

Conread position: 4-451
Cow position:
Alignm length: 481
Alignm identity: 303
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 365

Conread position: 4-451
Cow position:
Alignm length: 477
Alignm identity: 303
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 18, 194

Conread position: 4-453
Cow position:
Alignm length: 465
Alignm identity: 302
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 36

Conread position: 4-462
Cow position:
Alignm length: 477
Alignm identity: 305
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 38

Conread position: 4-555
Cow position:
Alignm length: 592
Alignm identity: 385
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 18, 246

Conread position: 4-562
Cow position:
Alignm length: 592
Alignm identity: 367
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 118

Conread position: 4-562
Cow position:
Alignm length: 591
Alignm identity: 362
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 125

Conread position: 4-563
Cow position:
Alignm length: 604
Alignm identity: 372
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 18, 317

Conread position: 6-558
Cow position:
Alignm length: 576
Alignm identity: 354
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 124

Conread position: 7-302
Cow position:
Alignm length: 316
Alignm identity: 224
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 15, 76

Conread position: 7-302
Cow position:
Alignm length: 314
Alignm identity: 213
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 71

Conread position: 7-303
Cow position:
Alignm length: 329
Alignm identity: 226
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 7-303
Cow position:
Alignm length: 317
Alignm identity: 215
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 11, 27

Conread position: 7-394
Cow position:
Alignm length: 407
Alignm identity: 274
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 16, 49

Conread position: 7-426
Cow position:
Alignm length: 439
Alignm identity: 280
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 153

Conread position: 7-437
Cow position:
Alignm length: 464
Alignm identity: 295
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 285

Conread position: 7-451
Cow position:
Alignm length: 463
Alignm identity: 294
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 9

Conread position: 7-461
Cow position:
Alignm length: 474
Alignm identity: 311
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 33

Conread position: 7-563
Cow position:
Alignm length: 594
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 42

Conread position: 8-450
Cow position:
Alignm length: 448
Alignm identity: 295
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 15, 85

Conread position: 8-461
Cow position:
Alignm length: 482
Alignm identity: 303
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 310

Conread position: 8-518
Cow position:
Alignm length: 533
Alignm identity: 346
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 12, 121

Conread position: 8-579
Cow position:
Alignm length: 611
Alignm identity: 382
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 14, 31

Conread position: 8-579
Cow position:
Alignm length: 598
Alignm identity: 380
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 10, 158

Conread position: 9-293
Cow position:
Alignm length: 304
Alignm identity: 204
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 204

Conread position: 9-306
Cow position:
Alignm length: 305
Alignm identity: 194
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 292

Conread position: 11-580
Cow position:
Alignm length: 605
Alignm identity: 385
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 113, 253

Conread position: 13-302
Cow position:
Alignm length: 308
Alignm identity: 208
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 13-565
Cow position:
Alignm length: 591
Alignm identity: 375
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 99

Conread position: 14-259
Cow position:
Alignm length: 261
Alignm identity: 177
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 107, 161

Conread position: 14-557
Cow position:
Alignm length: 591
Alignm identity: 385
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 31, 23

Conread position: 15-330
Cow position:
Alignm length: 334
Alignm identity: 226
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 105, 17

Conread position: 17-387
Cow position:
Alignm length: 404
Alignm identity: 266
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 224

Conread position: 17-448
Cow position:
Alignm length: 443
Alignm identity: 273
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 138, 118

Conread position: 17-453
Cow position:
Alignm length: 464
Alignm identity: 301
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 79, 228

Conread position: 17-517
Cow position:
Alignm length: 521
Alignm identity: 328
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 68

Conread position: 17-563
Cow position:
Alignm length: 577
Alignm identity: 364
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 15

Conread position: 17-578
Cow position:
Alignm length: 601
Alignm identity: 383
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 79, 243

Conread position: 17-579
Cow position:
Alignm length: 597
Alignm identity: 379
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 95, 226

Conread position: 18-409
Cow position:
Alignm length: 421
Alignm identity: 268
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 61

Conread position: 18-437
Cow position:
Alignm length: 437
Alignm identity: 289
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 90

Conread position: 21-295
Cow position:
Alignm length: 290
Alignm identity: 195
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 60

Conread position: 33-258
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 98, 7

Conread position: 42-434
Cow position:
Alignm length: 430
Alignm identity: 285
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 245

Conread position: 42-459
Cow position:
Alignm length: 436
Alignm identity: 286
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 66, 27

Conread position: 44-303
Cow position:
Alignm length: 273
Alignm identity: 181
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 76, 58

Conread position: 75-329
Cow position:
Alignm length: 265
Alignm identity: 185
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 7

Conread position: 79-410
Cow position:
Alignm length: 361
Alignm identity: 240
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 153

Conread position: 113-318
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 113-592
Cow position:
Alignm length: 511
Alignm identity: 327
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 12, 41

Conread position: 114-579
Cow position:
Alignm length: 494
Alignm identity: 320
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 16, 81

Conread position: 116-394
Cow position:
Alignm length: 285
Alignm identity: 192
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 38

Conread position: 120-418
Cow position:
Alignm length: 310
Alignm identity: 207
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 15

Conread position: 122-330
Cow position:
Alignm length: 217
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 125-285
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 30

Conread position: 125-579
Cow position:
Alignm length: 475
Alignm identity: 293
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 10

Conread position: 126-578
Cow position:
Alignm length: 476
Alignm identity: 319
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 157, 72

Conread position: 129-508
Cow position:
Alignm length: 398
Alignm identity: 255
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 41

Conread position: 129-582
Cow position:
Alignm length: 476
Alignm identity: 310
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 114

Conread position: 130-579
Cow position:
Alignm length: 469
Alignm identity: 291
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 47, 19

Conread position: 132-582
Cow position:
Alignm length: 480
Alignm identity: 307
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 104

Conread position: 150-579
Cow position:
Alignm length: 449
Alignm identity: 299
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 72, 223

Conread position: 153-318
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 128

Conread position: 155-336
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 167

Conread position: 163-575
Cow position:
Alignm length: 433
Alignm identity: 279
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 120, 65

Conread position: 167-549
Cow position:
Alignm length: 397
Alignm identity: 262
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 60, 189

Conread position: 169-566
Cow position:
Alignm length: 423
Alignm identity: 275
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 53, 64

Conread position: 187-579
Cow position:
Alignm length: 415
Alignm identity: 280
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 35, 117

Conread position: 264-561
Cow position:
Alignm length: 318
Alignm identity: 212
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 105

Show alignments to all cow chromosomes.