Cow genome map
| Conread name: | Ss1.1-rspc025_m8.5 |
| Conread position: | 1-278 |
| Cow position: | chrX:28820166-28819889 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 24, 81 |
| Conread position: | 1-453 |
| Cow position: | chrX:23587229-23586763 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 110 |
| Conread position: | 1-453 |
| Cow position: | chrX:24020680-24021137 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 318 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 19, 286 |
| Conread position: | 1-507 |
| Cow position: | chrX:25738481-25737959 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 323 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 23, 314 |
| Conread position: | 1-579 |
| Cow position: | chrX:37684087-37684675 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 393 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 1-579 |
| Cow position: | chrX:37960034-37959440 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 75 |
| Conread position: | 2-451 |
| Cow position: | chrX:36840131-36839662 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 294 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 25, 299 |
| Conread position: | 2-454 |
| Cow position: | chrX:18840803-18841264 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 298 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 21, 195 |
| Conread position: | 2-579 |
| Cow position: | chrX:23927756-23928330 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 374 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 20, 43 |
| Conread position: | 3-245 |
| Cow position: | chrX:25359605-25359358 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 3-277 |
| Cow position: | chrX:10440406-10440691 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 3-281 |
| Cow position: | chrX:16553220-16552939 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 19, 102 |
| Conread position: | 3-281 |
| Cow position: | chrX:16688696-16688400 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 3-284 |
| Cow position: | chrX:29942578-29942286 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 259 |
| Conread position: | 3-285 |
| Cow position: | chrX:160856-160560 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 277 |
| Conread position: | 3-295 |
| Cow position: | chrX:30089625-30089929 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 3-302 |
| Cow position: | chrX:1055963-1056277 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 115, 13 |
| Conread position: | 3-303 |
| Cow position: | chrX:1342840-1343143 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 259 |
| Conread position: | 3-303 |
| Cow position: | chrX:3211117-3211431 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 19, 148 |
| Conread position: | 3-303 |
| Cow position: | chrX:19595352-19595036 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 3-305 |
| Cow position: | chrX:7805805-7805488 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 225 |
| Conread position: | 3-421 |
| Cow position: | chrX:21728747-21729174 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 3-431 |
| Cow position: | chrX:25015051-25015486 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 48 |
| Conread position: | 3-442 |
| Cow position: | chrX:27095547-27095095 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 317 |
| Conread position: | 3-462 |
| Cow position: | chrX:15140120-15140593 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 303 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 16, 47 |
| Conread position: | 3-587 |
| Cow position: | chrX:35937657-35938260 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 382 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 47 |
| Conread position: | 4-256 |
| Cow position: | chrX:24923277-24923014 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 18, 155 |
| Conread position: | 4-278 |
| Cow position: | chrX:13800396-13800683 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 18, 192 |
| Conread position: | 4-281 |
| Cow position: | chrX:13885397-13885120 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 4-296 |
| Cow position: | chrX:13928324-13928626 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 140 |
| Conread position: | 4-299 |
| Cow position: | chrX:12102538-12102849 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 18, 201 |
| Conread position: | 4-302 |
| Cow position: | chrX:2293173-2293490 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-302 |
| Cow position: | chrX:11566341-11566024 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 4-302 |
| Cow position: | chrX:14049767-14050084 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 140 |
| Conread position: | 4-302 |
| Cow position: | chrX:25459212-25459529 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 177 |
| Conread position: | 4-302 |
| Cow position: | chrX:39185600-39185283 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-303 |
| Cow position: | chrX:5332010-5332323 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 305 |
| Conread position: | 4-303 |
| Cow position: | chrX:5334392-5334705 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 305 |
| Conread position: | 4-303 |
| Cow position: | chrX:30159568-30159881 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 199 |
| Conread position: | 4-305 |
| Cow position: | chrX:18769337-18769026 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 10, 80 |
| Conread position: | 4-328 |
| Cow position: | chrX:25280397-25280744 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 117, 12 |
| Conread position: | 4-411 |
| Cow position: | chrX:29231184-29230761 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 276 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 14, 223 |
| Conread position: | 4-419 |
| Cow position: | chrX:32002997-32003435 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 16, 75 |
| Conread position: | 4-436 |
| Cow position: | chrX:41106583-41107014 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 298 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 116, 67 |
| Conread position: | 4-447 |
| Cow position: | chrX:3952279-3951818 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 311 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 19, 261 |
| Conread position: | 4-451 |
| Cow position: | chrX:18488287-18488765 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 307 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 367 |
| Conread position: | 4-451 |
| Cow position: | chrX:20021004-20020530 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 303 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 365 |
| Conread position: | 4-451 |
| Cow position: | chrX:37080092-37080565 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 303 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 18, 194 |
| Conread position: | 4-453 |
| Cow position: | chrX:508727-509177 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 302 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 4-462 |
| Cow position: | chrX:35935356-35935821 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 4-555 |
| Cow position: | chrX:23974016-23974599 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 385 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 18, 246 |
| Conread position: | 4-562 |
| Cow position: | chrX:671576-672165 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 367 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 18, 118 |
| Conread position: | 4-562 |
| Cow position: | chrX:22612812-22612227 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 362 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 125 |
| Conread position: | 4-563 |
| Cow position: | chrX:5646677-5647279 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 372 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 18, 317 |
| Conread position: | 6-558 |
| Cow position: | chrX:17889457-17890021 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 354 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 124 |
| Conread position: | 7-302 |
| Cow position: | chrX:4499055-4498746 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 15, 76 |
| Conread position: | 7-302 |
| Cow position: | chrX:41847110-41847420 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 71 |
| Conread position: | 7-303 |
| Cow position: | chrX:23515042-23515370 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-303 |
| Cow position: | chrX:24006405-24006720 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 11, 27 |
| Conread position: | 7-394 |
| Cow position: | chrX:38396136-38395736 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 16, 49 |
| Conread position: | 7-426 |
| Cow position: | chrX:22102350-22102776 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 153 |
| Conread position: | 7-437 |
| Cow position: | chrX:15306449-15306909 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 285 |
| Conread position: | 7-451 |
| Cow position: | chrX:33803584-33804037 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 63, 9 |
| Conread position: | 7-461 |
| Cow position: | chrX:24951126-24951585 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 311 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 16, 33 |
| Conread position: | 7-563 |
| Cow position: | chrX:10409660-10410244 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 42 |
| Conread position: | 8-450 |
| Cow position: | chrX:6088972-6089401 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 295 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 15, 85 |
| Conread position: | 8-461 |
| Cow position: | chrX:18244405-18243931 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 303 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 14, 310 |
| Conread position: | 8-518 |
| Cow position: | chrX:37105596-37105081 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 346 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 12, 121 |
| Conread position: | 8-579 |
| Cow position: | chrX:20652831-20652228 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 382 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 8-579 |
| Cow position: | chrX:24888716-24889302 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 380 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 10, 158 |
| Conread position: | 9-293 |
| Cow position: | chrX:6659951-6659651 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 204 |
| Conread position: | 9-306 |
| Cow position: | chrX:3405931-3406234 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 292 |
| Conread position: | 11-580 |
| Cow position: | chrX:29197162-29196563 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 385 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 113, 253 |
| Conread position: | 13-302 |
| Cow position: | chrX:27705016-27704709 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 13-565 |
| Cow position: | chrX:46929651-46930229 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 375 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 99 |
| Conread position: | 14-259 |
| Cow position: | chrX:27408046-27408305 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 107, 161 |
| Conread position: | 14-557 |
| Cow position: | chrX:6026285-6026869 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 385 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 15-330 |
| Cow position: | chrX:38569894-38569563 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 105, 17 |
| Conread position: | 17-387 |
| Cow position: | chrX:21765012-21764612 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 54, 224 |
| Conread position: | 17-448 |
| Cow position: | chrX:28879193-28879629 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 273 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 138, 118 |
| Conread position: | 17-453 |
| Cow position: | chrX:24225211-24225668 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 79, 228 |
| Conread position: | 17-517 |
| Cow position: | chrX:27450647-27451160 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 328 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 45, 68 |
| Conread position: | 17-563 |
| Cow position: | chrX:23326412-23326978 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 364 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 17-578 |
| Cow position: | chrX:23314400-23314992 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 383 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 79, 243 |
| Conread position: | 17-579 |
| Cow position: | chrX:43789426-43790008 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 379 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 95, 226 |
| Conread position: | 18-409 |
| Cow position: | chrX:31933489-31933905 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 61 |
| Conread position: | 18-437 |
| Cow position: | chrX:19650097-19650526 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 62, 90 |
| Conread position: | 21-295 |
| Cow position: | chrX:17902087-17902374 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 72, 60 |
| Conread position: | 33-258 |
| Cow position: | chrX:40516898-40516666 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 98, 7 |
| Conread position: | 42-434 |
| Cow position: | chrX:28666564-28666991 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 75, 245 |
| Conread position: | 42-459 |
| Cow position: | chrX:37453579-37453153 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 286 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 66, 27 |
| Conread position: | 44-303 |
| Cow position: | chrX:8108148-8107878 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 76, 58 |
| Conread position: | 75-329 |
| Cow position: | chrX:39903151-39903411 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 41, 7 |
| Conread position: | 79-410 |
| Cow position: | chrX:31453251-31453609 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 153 |
| Conread position: | 113-318 |
| Cow position: | chrX:10455000-10454784 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 113-592 |
| Cow position: | chrX:2271921-2271415 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 327 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 114-579 |
| Cow position: | chrX:10822802-10823281 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 320 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 16, 81 |
| Conread position: | 116-394 |
| Cow position: | chrX:17985308-17985583 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 20, 38 |
| Conread position: | 120-418 |
| Cow position: | chrX:13266749-13266444 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 66, 15 |
| Conread position: | 122-330 |
| Cow position: | chrX:24129599-24129383 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 125-285 |
| Cow position: | chrX:38036989-38037150 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 97, 30 |
| Conread position: | 125-579 |
| Cow position: | chrX:29029410-29029881 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 97, 10 |
| Conread position: | 126-578 |
| Cow position: | chrX:25320971-25321437 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 319 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 157, 72 |
| Conread position: | 129-508 |
| Cow position: | chrX:18153191-18153582 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 129-582 |
| Cow position: | chrX:15568601-15569070 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 310 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 37, 114 |
| Conread position: | 130-579 |
| Cow position: | chrX:21191138-21190674 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 291 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 47, 19 |
| Conread position: | 132-582 |
| Cow position: | chrX:21206413-21206883 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 307 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 104 |
| Conread position: | 150-579 |
| Cow position: | chrX:27646458-27646018 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 299 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 72, 223 |
| Conread position: | 153-318 |
| Cow position: | chrX:11588431-11588596 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 128 |
| Conread position: | 155-336 |
| Cow position: | chrX:11798400-11798218 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 67, 167 |
| Conread position: | 163-575 |
| Cow position: | chrX:27588149-27588567 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 120, 65 |
| Conread position: | 167-549 |
| Cow position: | chrX:37071121-37071511 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 60, 189 |
| Conread position: | 169-566 |
| Cow position: | chrX:7308938-7308521 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 275 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 53, 64 |
| Conread position: | 187-579 |
| Cow position: | chrX:33172934-33173346 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 280 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 35, 117 |
| Conread position: | 264-561 |
| Cow position: | chrX:26341061-26341375 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 105 |
Show alignments to all cow chromosomes.