Cow genome map
| Conread name: | Ss1.1-rspc028_p1.5.5 |
| Conread position: | 2-130 |
| Cow position: | chr12:15641039-15641168 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 5-132 |
| Cow position: | chr12:39465644-39465517 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-138 |
| Cow position: | chr12:19507702-19507569 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-158 |
| Cow position: | chr12:32169605-32169453 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 145, 86 |
| Conread position: | 5-162 |
| Cow position: | chr12:33948969-33948812 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-128 |
| Cow position: | chr12:45820303-45820424 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-132 |
| Cow position: | chr12:15260825-15260701 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 7-132 |
| Cow position: | chr12:26151398-26151522 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 7-132 |
| Cow position: | chr12:27357450-27357326 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 7-138 |
| Cow position: | chr12:18518736-18518605 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-139 |
| Cow position: | chr12:12232944-12232814 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 45, 65 |
| Conread position: | 7-140 |
| Cow position: | chr12:18123732-18123599 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-144 |
| Cow position: | chr12:30745779-30745647 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 120, 81 |
| Conread position: | 7-147 |
| Cow position: | chr12:15089578-15089440 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 7-148 |
| Cow position: | chr12:17269865-17269723 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 7-148 |
| Cow position: | chr12:37169883-37170023 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 7-148 |
| Cow position: | chr12:45092509-45092368 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-149 |
| Cow position: | chr12:30605103-30605242 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 7-150 |
| Cow position: | chr12:5839592-5839737 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 7-150 |
| Cow position: | chr12:5906119-5905977 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 7-150 |
| Cow position: | chr12:7884618-7884760 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 7-150 |
| Cow position: | chr12:11056939-11056796 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 132 |
| Conread position: | 7-150 |
| Cow position: | chr12:23644740-23644884 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 7-150 |
| Cow position: | chr12:25561432-25561292 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-151 |
| Cow position: | chr12:15122389-15122243 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 81, 120 |
| Conread position: | 7-151 |
| Cow position: | chr12:17252136-17252278 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 7-151 |
| Cow position: | chr12:27037387-27037531 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-151 |
| Cow position: | chr12:30170731-30170589 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 72, 8 |
| Conread position: | 7-153 |
| Cow position: | chr12:17879239-17879387 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 127, 42 |
| Conread position: | 8-115 |
| Cow position: | chr12:14986811-14986704 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-131 |
| Cow position: | chr12:26777128-26777250 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 6, 55 |
| Conread position: | 8-146 |
| Cow position: | chr12:37514219-37514355 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 8-148 |
| Cow position: | chr12:19261258-19261117 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 8-149 |
| Cow position: | chr12:42879756-42879616 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 9-150 |
| Cow position: | chr12:9143448-9143309 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 11-150 |
| Cow position: | chr12:30819303-30819163 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 120, 0 |
Show alignments to all cow chromosomes.