Cow genome map

Conread name: Ss1.1-rspc028_p1.5.5

Conread position: 2-130
Cow position: chr2:44168172-44168047 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 2-132
Cow position: chr2:37619807-37619937 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-150
Cow position: chr2:19494321-19494173 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 2-151
Cow position: chr2:42801145-42801003 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 4-150
Cow position: chr2:21003279-21003133 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-150
Cow position: chr2:41248676-41248528 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 130, 0

Conread position: 5-131
Cow position: chr2:47624303-47624428 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 5-132
Cow position: chr2:43624429-43624557 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 44, 85

Conread position: 5-146
Cow position: chr2:39334767-39334906 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 116

Conread position: 5-146
Cow position: chr2:45542295-45542435 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 131, 0

Conread position: 5-150
Cow position: chr2:992260-992115 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 132

Conread position: 5-151
Cow position: chr2:827507-827655 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 129, 0

Conread position: 5-151
Cow position: chr2:9063377-9063231 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 128, 71

Conread position: 5-168
Cow position: chr2:34749880-34750043 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-122
Cow position: chr2:1476509-1476397 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 7-125
Cow position: chr2:51099873-51099991 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-128
Cow position: chr2:54971281-54971157 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 7-129
Cow position: chr2:5604626-5604505 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 7-130
Cow position: chr2:43609016-43609139 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 7-131
Cow position: chr2:6329129-6329253 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-132
Cow position: chr2:14634286-14634161 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-132
Cow position: chr2:24434178-24434302 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 7-132
Cow position: chr2:38965719-38965597 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 7-132
Cow position: chr2:39941577-39941455 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 7-132
Cow position: chr2:40703565-40703689 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 7-132
Cow position: chr2:43591271-43591396 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 65, 44

Conread position: 7-132
Cow position: chr2:53491347-53491474 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 7-135
Cow position: chr2:72183390-72183518 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 7-135
Cow position: chr2:84480399-84480527 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 7-136
Cow position: chr2:31784031-31783903 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 7-137
Cow position: chr2:17444900-17444768 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 7-137
Cow position: chr2:63074753-63074880 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 7-138
Cow position: chr2:58074243-58074373 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 7-143
Cow position: chr2:18997821-18997687 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 109, 0

Conread position: 7-144
Cow position: chr2:13001898-13001765 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 7-146
Cow position: chr2:7573403-7573539 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 7-146
Cow position: chr2:15694307-15694169 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 117
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 7-146
Cow position: chr2:40373299-40373435 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 7-146
Cow position: chr2:40402925-40403063 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 7-146
Cow position: chr2:46247359-46247499 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 132, 0

Conread position: 7-146
Cow position: chr2:59952757-59952897 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 7-148
Cow position: chr2:19286980-19287121 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-148
Cow position: chr2:40257310-40257452 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 133, 0

Conread position: 7-148
Cow position: chr2:43790202-43790062 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 131, 0

Conread position: 7-148
Cow position: chr2:70704360-70704221 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 7-149
Cow position: chr2:21410322-21410179 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 7-149
Cow position: chr2:40466737-40466596 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 131, 0

Conread position: 7-149
Cow position: chr2:45642385-45642528 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 65

Conread position: 7-149
Cow position: chr2:46968090-46968229 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 7-149
Cow position: chr2:62743907-62744046 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 7-150
Cow position: chr2:1638705-1638563 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 137, 65

Conread position: 7-150
Cow position: chr2:14089894-14089753 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 7-150
Cow position: chr2:25448430-25448289 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 126, 0

Conread position: 7-150
Cow position: chr2:30911423-30911280 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-150
Cow position: chr2:38640425-38640284 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 7-150
Cow position: chr2:40484407-40484550 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 137, 130

Conread position: 7-150
Cow position: chr2:40880170-40880030 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 7-150
Cow position: chr2:44217807-44217948 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 7-150
Cow position: chr2:44222926-44222783 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 7-150
Cow position: chr2:45912530-45912673 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 7-150
Cow position: chr2:46162059-46161915 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 127, 0

Conread position: 7-150
Cow position: chr2:54810753-54810893 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 7-150
Cow position: chr2:59427551-59427409 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 7-150
Cow position: chr2:69350463-69350607 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 133, 0

Conread position: 7-150
Cow position: chr2:71437276-71437419 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 7-150
Cow position: chr2:77467348-77467489 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 7-150
Cow position: chr2:82580826-82580970 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 86

Conread position: 7-151
Cow position: chr2:17966927-17967070 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 132, 97

Conread position: 7-151
Cow position: chr2:45499100-45499243 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 7-151
Cow position: chr2:46052601-46052458 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 7-151
Cow position: chr2:46188994-46189139 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 7-151
Cow position: chr2:50449808-50449953 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 138, 0

Conread position: 7-151
Cow position: chr2:58035209-58035064 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 138, 0

Conread position: 7-151
Cow position: chr2:77157246-77157387 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 7-151
Cow position: chr2:83184256-83184111 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 140, 0

Conread position: 7-152
Cow position: chr2:29121983-29121840 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 7-152
Cow position: chr2:69747514-69747660 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 137, 0

Conread position: 7-155
Cow position: chr2:33554068-33554215 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 139, 122

Conread position: 7-156
Cow position: chr2:10439941-10439792 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 124, 132

Conread position: 7-162
Cow position: chr2:46227560-46227408 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 136, 42

Conread position: 7-168
Cow position: chr2:1335593-1335752 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 126, 0

Conread position: 7-175
Cow position: chr2:36055697-36055866 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 144, 0

Conread position: 7-187
Cow position: chr2:50905606-50905789 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 8, 132

Conread position: 8-127
Cow position: chr2:35948579-35948697 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 8-132
Cow position: chr2:39798343-39798219 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-136
Cow position: chr2:60091334-60091461 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 122, 7

Conread position: 9-150
Cow position: chr2:38362266-38362407 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 125, 40

Conread position: 9-150
Cow position: chr2:47015236-47015374 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 10-150
Cow position: chr2:13684799-13684658 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 53, 134

Conread position: 15-132
Cow position: chr2:13672615-13672501 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 15-150
Cow position: chr2:30144810-30144677 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 114
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 121, 61

Conread position: 22-132
Cow position: chr2:46351695-46351805 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 22-150
Cow position: chr2:16492731-16492603 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.