Cow genome map
| Conread name: | Ss1.1-rspc028_p1.5.5 |
| Conread position: | 2-127 |
| Cow position: | chr22:26233735-26233611 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 2-132 |
| Cow position: | chr22:42618102-42617973 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 2-145 |
| Cow position: | chr22:34735968-34735826 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 8, 128 |
| Conread position: | 2-149 |
| Cow position: | chr22:12157741-12157888 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-143 |
| Cow position: | chr22:5616403-5616264 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-147 |
| Cow position: | chr22:17152779-17152635 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 4-148 |
| Cow position: | chr22:9283497-9283640 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 4-151 |
| Cow position: | chr22:1659265-1659120 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 5-131 |
| Cow position: | chr22:2109527-2109652 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 5-132 |
| Cow position: | chr22:6176186-6176312 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 5-154 |
| Cow position: | chr22:4060847-4060995 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 6-148 |
| Cow position: | chr22:13957545-13957685 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 7-122 |
| Cow position: | chr22:44741174-44741059 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-127 |
| Cow position: | chr22:10323978-10323858 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-128 |
| Cow position: | chr22:31510280-31510403 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 7-132 |
| Cow position: | chr22:846001-845876 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-132 |
| Cow position: | chr22:9127506-9127382 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 7-132 |
| Cow position: | chr22:10557377-10557253 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 7-135 |
| Cow position: | chr22:22613203-22613076 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 7-136 |
| Cow position: | chr22:21355043-21355172 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-138 |
| Cow position: | chr22:33985705-33985833 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 7-140 |
| Cow position: | chr22:43398100-43397967 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-144 |
| Cow position: | chr22:4017571-4017440 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 7-145 |
| Cow position: | chr22:10532598-10532460 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-146 |
| Cow position: | chr22:14141244-14141383 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-146 |
| Cow position: | chr22:30998984-30998847 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 7-147 |
| Cow position: | chr22:18020936-18021075 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 134, 26 |
| Conread position: | 7-149 |
| Cow position: | chr22:1591122-1590980 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-149 |
| Cow position: | chr22:3317218-3317077 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 7-149 |
| Cow position: | chr22:4137553-4137693 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 7-149 |
| Cow position: | chr22:10162065-10161920 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 7-149 |
| Cow position: | chr22:15090840-15090695 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 7-149 |
| Cow position: | chr22:18259316-18259177 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 136, 15 |
| Conread position: | 7-149 |
| Cow position: | chr22:25742851-25742993 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-149 |
| Cow position: | chr22:34441532-34441679 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 7-150 |
| Cow position: | chr22:2100848-2100990 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 7-150 |
| Cow position: | chr22:6327670-6327814 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 7-150 |
| Cow position: | chr22:9171506-9171363 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-150 |
| Cow position: | chr22:21502842-21502700 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 127, 17 |
| Conread position: | 7-150 |
| Cow position: | chr22:25387425-25387281 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 7-151 |
| Cow position: | chr22:4563461-4563316 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 7-151 |
| Cow position: | chr22:6720983-6721124 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 7-151 |
| Cow position: | chr22:12341294-12341151 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 7-151 |
| Cow position: | chr22:16094808-16094947 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 7-151 |
| Cow position: | chr22:23440198-23440335 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 7-151 |
| Cow position: | chr22:38439059-38439204 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 7-152 |
| Cow position: | chr22:44717819-44717667 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 7-153 |
| Cow position: | chr22:12803287-12803435 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 7-153 |
| Cow position: | chr22:17852539-17852683 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 138, 9 |
| Conread position: | 7-153 |
| Cow position: | chr22:28071656-28071509 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 126, 40 |
| Conread position: | 8-132 |
| Cow position: | chr22:4164076-4163952 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 7, 79 |
| Conread position: | 8-136 |
| Cow position: | chr22:15567919-15568046 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 8-141 |
| Cow position: | chr22:30253297-30253165 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 8-145 |
| Cow position: | chr22:4149517-4149383 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 8-150 |
| Cow position: | chr22:4011281-4011140 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 70, 129 |
| Conread position: | 8-150 |
| Cow position: | chr22:12527025-12527164 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 11, 63 |
| Conread position: | 8-152 |
| Cow position: | chr22:6215459-6215601 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 8-153 |
| Cow position: | chr22:13300508-13300363 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 123, 135 |
| Conread position: | 8-159 |
| Cow position: | chr22:864418-864569 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 65 |
| Conread position: | 9-149 |
| Cow position: | chr22:42635337-42635476 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 9-150 |
| Cow position: | chr22:4119466-4119607 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-153 |
| Cow position: | chr22:4315725-4315580 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 130, 62 |
| Conread position: | 155-474 |
| Cow position: | chr22:42787733-42787418 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 83 |
| Conread position: | 469-1644 |
| Cow position: | chr22:42787196-42786045 (view UCSC Genome Browser custom track) |
| Alignm length: | 1197 |
| Alignm identity: | 929 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 423, 78 |
Show alignments to all cow chromosomes.