Cow genome map
| Conread name: | Ss1.1-rspc028_p1.5.5 |
| Conread position: | 1-146 |
| Cow position: | chr23:3282011-3282157 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 2-139 |
| Cow position: | chr23:22586989-22586852 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 22, 86 |
| Conread position: | 2-152 |
| Cow position: | chr23:4470390-4470539 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 7, 75 |
| Conread position: | 4-137 |
| Cow position: | chr23:20744486-20744619 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-145 |
| Cow position: | chr23:1981555-1981693 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 5-133 |
| Cow position: | chr23:22238716-22238844 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-150 |
| Cow position: | chr23:21502525-21502677 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 83, 145 |
| Conread position: | 5-152 |
| Cow position: | chr23:348842-348988 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 145, 136 |
| Conread position: | 5-153 |
| Cow position: | chr23:35368941-35369088 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 6-148 |
| Cow position: | chr23:5426538-5426396 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-123 |
| Cow position: | chr23:1194388-1194504 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-131 |
| Cow position: | chr23:21765023-21764900 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 87, 36 |
| Conread position: | 7-132 |
| Cow position: | chr23:5785948-5785823 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-132 |
| Cow position: | chr23:29458995-29459120 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-136 |
| Cow position: | chr23:3814177-3814306 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-136 |
| Cow position: | chr23:8698524-8698396 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 7-139 |
| Cow position: | chr23:22668401-22668535 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 7-143 |
| Cow position: | chr23:534331-534198 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 7-145 |
| Cow position: | chr23:5732654-5732518 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 7-148 |
| Cow position: | chr23:26986168-26986308 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 7-149 |
| Cow position: | chr23:12363514-12363655 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 7-149 |
| Cow position: | chr23:35938449-35938308 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 7-150 |
| Cow position: | chr23:385208-385348 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 7-150 |
| Cow position: | chr23:2160536-2160671 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 7-150 |
| Cow position: | chr23:13202255-13202397 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 7-150 |
| Cow position: | chr23:16961401-16961258 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-150 |
| Cow position: | chr23:17404942-17404801 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 7-150 |
| Cow position: | chr23:20539490-20539345 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-150 |
| Cow position: | chr23:24926917-24926774 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 136, 44 |
| Conread position: | 7-150 |
| Cow position: | chr23:40637361-40637219 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 7-151 |
| Cow position: | chr23:1222133-1222277 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-151 |
| Cow position: | chr23:1403702-1403843 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 7-151 |
| Cow position: | chr23:2501750-2501894 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-151 |
| Cow position: | chr23:5707097-5706954 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 7-151 |
| Cow position: | chr23:7845397-7845253 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-183 |
| Cow position: | chr23:20093141-20093315 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 130, 11 |
| Conread position: | 8-139 |
| Cow position: | chr23:24685347-24685216 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 88, 78 |
| Conread position: | 8-142 |
| Cow position: | chr23:17231251-17231118 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 8-150 |
| Cow position: | chr23:1883500-1883355 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 5, 131 |
| Conread position: | 8-150 |
| Cow position: | chr23:33717439-33717576 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 8-151 |
| Cow position: | chr23:2799683-2799541 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 8-151 |
| Cow position: | chr23:24966360-24966504 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 9-151 |
| Cow position: | chr23:3293796-3293658 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 9-153 |
| Cow position: | chr23:16881061-16881205 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-165 |
| Cow position: | chr23:7138257-7138396 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.