Cow genome map
| Conread name: | Ss1.1-rspc028_p1.5.5 |
| Conread position: | 4-119 |
| Cow position: | chr27:11466613-11466498 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-129 |
| Cow position: | chr27:788945-788820 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-132 |
| Cow position: | chr27:12710100-12710229 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 4-151 |
| Cow position: | chr27:26999570-26999423 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-108 |
| Cow position: | chr27:8630017-8629915 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 5-139 |
| Cow position: | chr27:21669264-21669130 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-150 |
| Cow position: | chr27:19508866-19509011 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-130 |
| Cow position: | chr27:15409181-15409058 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-130 |
| Cow position: | chr27:20092979-20092856 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-132 |
| Cow position: | chr27:16589847-16589722 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-132 |
| Cow position: | chr27:23452317-23452441 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 7-138 |
| Cow position: | chr27:7343573-7343442 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 9 |
| Conread position: | 7-144 |
| Cow position: | chr27:14670527-14670390 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-149 |
| Cow position: | chr27:19685858-19685716 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-149 |
| Cow position: | chr27:23560176-23560035 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 7-150 |
| Cow position: | chr27:4672867-4673015 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-150 |
| Cow position: | chr27:17397599-17397455 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 7-150 |
| Cow position: | chr27:23108045-23107905 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 138, 80 |
| Conread position: | 7-151 |
| Cow position: | chr27:19387874-19388014 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 7-153 |
| Cow position: | chr27:237126-237271 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 137, 40 |
| Conread position: | 7-153 |
| Cow position: | chr27:426825-426971 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 127, 69 |
| Conread position: | 7-153 |
| Cow position: | chr27:1122887-1123032 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 7-153 |
| Cow position: | chr27:20068119-20067974 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 123, 64 |
| Conread position: | 8-132 |
| Cow position: | chr27:30489554-30489430 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-140 |
| Cow position: | chr27:15003122-15002990 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-147 |
| Cow position: | chr27:20641476-20641340 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 132, 9 |
| Conread position: | 17-151 |
| Cow position: | chr27:16625766-16625896 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
Show alignments to all cow chromosomes.