Cow genome map
| Conread name: | Ss1.1-rspc028_p1.5.5 |
| Conread position: | 2-148 |
| Cow position: | chr7:57593578-57593432 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-149 |
| Cow position: | chr7:48715002-48714855 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-151 |
| Cow position: | chr7:13228431-13228580 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-145 |
| Cow position: | chr7:18247682-18247824 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-132 |
| Cow position: | chr7:598390-598262 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-140 |
| Cow position: | chr7:59168411-59168275 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-151 |
| Cow position: | chr7:10943414-10943559 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 129, 97 |
| Conread position: | 5-150 |
| Cow position: | chr7:10294-10152 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 5-150 |
| Cow position: | chr7:52517471-52517326 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-159 |
| Cow position: | chr7:26631667-26631820 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 134 |
| Conread position: | 6-153 |
| Cow position: | chr7:48243816-48243670 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 7-127 |
| Cow position: | chr7:22793487-22793367 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-130 |
| Cow position: | chr7:31523688-31523565 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-132 |
| Cow position: | chr7:6043993-6044119 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 7-132 |
| Cow position: | chr7:10414991-10415116 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-132 |
| Cow position: | chr7:11796759-11796884 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-132 |
| Cow position: | chr7:15559830-15559705 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-132 |
| Cow position: | chr7:26263507-26263635 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-132 |
| Cow position: | chr7:32894105-32894230 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-132 |
| Cow position: | chr7:32946211-32946086 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-132 |
| Cow position: | chr7:36996502-36996380 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 7-132 |
| Cow position: | chr7:42637114-42636990 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 7-139 |
| Cow position: | chr7:14765985-14766116 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 7-139 |
| Cow position: | chr7:39325869-39325740 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 7-140 |
| Cow position: | chr7:20968567-20968430 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 125 |
| Conread position: | 7-144 |
| Cow position: | chr7:26737203-26737339 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 7-144 |
| Cow position: | chr7:26871848-26871985 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-146 |
| Cow position: | chr7:8658658-8658521 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 7-146 |
| Cow position: | chr7:35245447-35245581 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 6, 60 |
| Conread position: | 7-146 |
| Cow position: | chr7:49405430-49405290 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 7-147 |
| Cow position: | chr7:39451006-39451144 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 7-150 |
| Cow position: | chr7:14317085-14316943 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 7-150 |
| Cow position: | chr7:15533932-15534077 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 7-150 |
| Cow position: | chr7:17713328-17713470 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 137, 120 |
| Conread position: | 7-150 |
| Cow position: | chr7:20535015-20534872 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-150 |
| Cow position: | chr7:28544319-28544178 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 7-150 |
| Cow position: | chr7:33393452-33393308 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 7-150 |
| Cow position: | chr7:35300274-35300417 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 55, 115 |
| Conread position: | 7-150 |
| Cow position: | chr7:39416053-39415910 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-150 |
| Cow position: | chr7:41871962-41872099 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 7-150 |
| Cow position: | chr7:46856820-46856961 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 7-150 |
| Cow position: | chr7:49106058-49106199 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 7-150 |
| Cow position: | chr7:49751267-49751129 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 7-150 |
| Cow position: | chr7:50065972-50066117 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 7-150 |
| Cow position: | chr7:60732495-60732637 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 7-150 |
| Cow position: | chr7:61699550-61699694 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 7-151 |
| Cow position: | chr7:4764988-4764845 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 7-151 |
| Cow position: | chr7:12488577-12488431 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 17, 139 |
| Conread position: | 7-151 |
| Cow position: | chr7:53785835-53785979 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 129 |
| Conread position: | 7-153 |
| Cow position: | chr7:6042115-6041971 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 7-153 |
| Cow position: | chr7:23646754-23646604 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 97, 138 |
| Conread position: | 7-166 |
| Cow position: | chr7:50021315-50021470 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 7-168 |
| Cow position: | chr7:36665464-36665310 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 8-132 |
| Cow position: | chr7:11487531-11487654 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 8-132 |
| Cow position: | chr7:53053260-53053385 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 8-139 |
| Cow position: | chr7:5237941-5238073 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 8-163 |
| Cow position: | chr7:48667556-48667402 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 83 |
| Conread position: | 9-151 |
| Cow position: | chr7:23456680-23456821 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 9-151 |
| Cow position: | chr7:63749335-63749477 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-144 |
| Cow position: | chr7:29510070-29509950 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.