Cow genome map


           Conread name:
           Ss1.1-rspl01_k4.5
        

               Conread position:
               1-154
               

               Cow position:
               chr10:29682273-29682115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               26, 87
               

               Conread position:
               149-275
               

               Cow position:
               chr10:29680373-29680247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               122
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               274-375
               

               Cow position:
               chr10:29677445-29677344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               375-462
               

               Cow position:
               chr10:29673153-29673063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               444-565
               

               Cow position:
               chr10:29672167-29672043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               539-621
               

               Cow position:
               chr10:29670040-29669959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               76
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               668-992
               

               Cow position:
               chr10:29667934-29667612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 0
               
Show alignments to all cow chromosomes.