• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-rspl03_j14.5
        

               
Conread position:
               
561-792
               

               
Cow position:
               
chr15:40000753-40000979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
562-833
               

               
Cow position:
               
chr15:2931741-2931467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
134, 47
               

               
Conread position:
               
591-887
               

               
Cow position:
               
chr15:15177171-15177467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
594-904
               

               
Cow position:
               
chr15:1857585-1857896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
598-815
               

               
Cow position:
               
chr15:14964299-14964086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
12, 104
               

               
Conread position:
               
598-904
               

               
Cow position:
               
chr15:11658720-11658399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
32, 240
               

               
Conread position:
               
600-791
               

               
Cow position:
               
chr15:18704065-18703878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
600-904
               

               
Cow position:
               
chr15:16603696-16603992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
266, 42
               

               
Conread position:
               
603-890
               

               
Cow position:
               
chr15:3695506-3695790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 96
               

               
Conread position:
               
604-897
               

               
Cow position:
               
chr15:4138004-4138295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
605-792
               

               
Cow position:
               
chr15:26849661-26849479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
605-842
               

               
Cow position:
               
chr15:44671469-44671227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 52
               

               
Conread position:
               
605-867
               

               
Cow position:
               
chr15:24462392-24462659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 138
               

               
Conread position:
               
605-902
               

               
Cow position:
               
chr15:35641879-35642186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 146
               

               
Conread position:
               
606-902
               

               
Cow position:
               
chr15:5158243-5158542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
92, 255
               

               
Conread position:
               
606-904
               

               
Cow position:
               
chr15:29809999-29810287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
606-907
               

               
Cow position:
               
chr15:53037092-53036795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
25, 95
               

               
Conread position:
               
607-901
               

               
Cow position:
               
chr15:44658237-44658523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
607-904
               

               
Cow position:
               
chr15:4919201-4918897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
6, 139
               

               
Conread position:
               
608-780
               

               
Cow position:
               
chr15:27656973-27657151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
608-878
               

               
Cow position:
               
chr15:19554054-19553779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 253
               

               
Conread position:
               
608-898
               

               
Cow position:
               
chr15:34284534-34284248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
608-902
               

               
Cow position:
               
chr15:24616437-24616739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 121
               

               
Conread position:
               
608-904
               

               
Cow position:
               
chr15:17762785-17763077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
608-904
               

               
Cow position:
               
chr15:22532123-22532407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
20, 104
               

               
Conread position:
               
608-904
               

               
Cow position:
               
chr15:25208886-25208593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 231
               

               
Conread position:
               
609-767
               

               
Cow position:
               
chr15:47920272-47920117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
609-787
               

               
Cow position:
               
chr15:40844744-40844567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
609-807
               

               
Cow position:
               
chr15:9314599-9314799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 115
               

               
Conread position:
               
609-815
               

               
Cow position:
               
chr15:12045666-12045456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
91, 123
               

               
Conread position:
               
609-817
               

               
Cow position:
               
chr15:44977686-44977899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 135
               

               
Conread position:
               
609-818
               

               
Cow position:
               
chr15:25595653-25595444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
609-823
               

               
Cow position:
               
chr15:848521-848736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
609-846
               

               
Cow position:
               
chr15:26442089-26442327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
609-864
               

               
Cow position:
               
chr15:27975998-27975739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
91, 28
               

               
Conread position:
               
609-902
               

               
Cow position:
               
chr15:27973335-27973050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 93
               

               
Conread position:
               
609-903
               

               
Cow position:
               
chr15:10088193-10088486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
21, 229
               

               
Conread position:
               
609-904
               

               
Cow position:
               
chr15:8665732-8665422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
89, 136
               

               
Conread position:
               
609-904
               

               
Cow position:
               
chr15:19771012-19771301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
89, 111
               

               
Conread position:
               
609-904
               

               
Cow position:
               
chr15:20081649-20081932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
57, 98
               

               
Conread position:
               
609-904
               

               
Cow position:
               
chr15:23275409-23275705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
609-904
               

               
Cow position:
               
chr15:24967676-24967958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
209, 99
               

               
Conread position:
               
609-904
               

               
Cow position:
               
chr15:26079468-26079192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
609-904
               

               
Cow position:
               
chr15:27230636-27230932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
609-904
               

               
Cow position:
               
chr15:31137590-31137296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 116
               

               
Conread position:
               
609-904
               

               
Cow position:
               
chr15:41125684-41125401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
609-904
               

               
Cow position:
               
chr15:50302062-50302353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
246, 98
               

               
Conread position:
               
609-905
               

               
Cow position:
               
chr15:286344-286651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
24, 289
               

               
Conread position:
               
609-909
               

               
Cow position:
               
chr15:34139863-34140160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
610-743
               

               
Cow position:
               
chr15:16492330-16492464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
610-783
               

               
Cow position:
               
chr15:49551087-49550908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
610-784
               

               
Cow position:
               
chr15:10199206-10199379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 107
               

               
Conread position:
               
610-788
               

               
Cow position:
               
chr15:4284244-4284428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
24, 135
               

               
Conread position:
               
610-798
               

               
Cow position:
               
chr15:40562810-40562618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 126
               

               
Conread position:
               
610-804
               

               
Cow position:
               
chr15:44809941-44810139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 133
               

               
Conread position:
               
610-805
               

               
Cow position:
               
chr15:46059232-46059433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
610-807
               

               
Cow position:
               
chr15:48052722-48052531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
118, 42
               

               
Conread position:
               
610-815
               

               
Cow position:
               
chr15:6227301-6227101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
610-819
               

               
Cow position:
               
chr15:43715201-43715412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
610-826
               

               
Cow position:
               
chr15:10153547-10153757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
89, 165
               

               
Conread position:
               
610-828
               

               
Cow position:
               
chr15:34223743-34223960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
33, 46
               

               
Conread position:
               
610-830
               

               
Cow position:
               
chr15:8641984-8642213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 195
               

               
Conread position:
               
610-833
               

               
Cow position:
               
chr15:22444113-22443889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 176
               

               
Conread position:
               
610-835
               

               
Cow position:
               
chr15:11909073-11908850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
21, 155
               

               
Conread position:
               
610-835
               

               
Cow position:
               
chr15:43114842-43114626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
118, 88
               

               
Conread position:
               
610-850
               

               
Cow position:
               
chr15:9879504-9879261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
96, 42
               

               
Conread position:
               
610-866
               

               
Cow position:
               
chr15:28924888-28924622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 137
               

               
Conread position:
               
610-871
               

               
Cow position:
               
chr15:275518-275792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
610-875
               

               
Cow position:
               
chr15:34896636-34896902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
24, 103
               

               
Conread position:
               
610-884
               

               
Cow position:
               
chr15:52316936-52317208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
237, 89
               

               
Conread position:
               
610-898
               

               
Cow position:
               
chr15:1804458-1804172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
610-898
               

               
Cow position:
               
chr15:5235115-5234840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
258, 60
               

               
Conread position:
               
610-902
               

               
Cow position:
               
chr15:225927-225638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
256, 114
               

               
Conread position:
               
610-902
               

               
Cow position:
               
chr15:5726192-5726491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
96, 27
               

               
Conread position:
               
610-902
               

               
Cow position:
               
chr15:21893656-21893949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
227, 98
               

               
Conread position:
               
610-902
               

               
Cow position:
               
chr15:37381507-37381789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
610-902
               

               
Cow position:
               
chr15:39326629-39326347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
610-903
               

               
Cow position:
               
chr15:24453203-24452906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
39, 115
               

               
Conread position:
               
610-904
               

               
Cow position:
               
chr15:3700407-3700116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
610-904
               

               
Cow position:
               
chr15:12304514-12304811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
610-904
               

               
Cow position:
               
chr15:13284910-13285188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
610-904
               

               
Cow position:
               
chr15:22939451-22939155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 107
               

               
Conread position:
               
610-904
               

               
Cow position:
               
chr15:36353542-36353838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
610-904
               

               
Cow position:
               
chr15:37644866-37645157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
610-920
               

               
Cow position:
               
chr15:39405616-39405924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 144
               

               
Conread position:
               
611-818
               

               
Cow position:
               
chr15:52791817-52792021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
89, 133
               

               
Conread position:
               
611-831
               

               
Cow position:
               
chr15:31495342-31495126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
611-835
               

               
Cow position:
               
chr15:4248025-4248249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
611-859
               

               
Cow position:
               
chr15:53028237-53028489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
18, 124
               

               
Conread position:
               
611-865
               

               
Cow position:
               
chr15:15154173-15154431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
611-866
               

               
Cow position:
               
chr15:30981827-30982071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
611-892
               

               
Cow position:
               
chr15:22531550-22531819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
222, 88
               

               
Conread position:
               
611-896
               

               
Cow position:
               
chr15:20534577-20534282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
611-897
               

               
Cow position:
               
chr15:36435078-36435367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 132
               

               
Conread position:
               
611-898
               

               
Cow position:
               
chr15:42888959-42888674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 132
               

               
Conread position:
               
611-901
               

               
Cow position:
               
chr15:45549-45251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 56
               

               
Conread position:
               
611-903
               

               
Cow position:
               
chr15:51307793-51307511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
238, 74
               

               
Conread position:
               
611-904
               

               
Cow position:
               
chr15:20459431-20459135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
611-904
               

               
Cow position:
               
chr15:49273836-49274121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
611-905
               

               
Cow position:
               
chr15:5409019-5408734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
611-905
               

               
Cow position:
               
chr15:30471102-30470799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 231
               

               
Conread position:
               
612-783
               

               
Cow position:
               
chr15:840269-840099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
612-809
               

               
Cow position:
               
chr15:46284041-46283842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
612-817
               

               
Cow position:
               
chr15:28823934-28823736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
612-821
               

               
Cow position:
               
chr15:36422496-36422699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
612-883
               

               
Cow position:
               
chr15:11614217-11613941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
94, 128
               

               
Conread position:
               
612-891
               

               
Cow position:
               
chr15:13395421-13395707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 122
               

               
Conread position:
               
612-897
               

               
Cow position:
               
chr15:20390832-20390546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
137, 43
               

               
Conread position:
               
612-902
               

               
Cow position:
               
chr15:608022-608312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
87, 24
               

               
Conread position:
               
612-902
               

               
Cow position:
               
chr15:25667348-25667055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 131
               

               
Conread position:
               
612-904
               

               
Cow position:
               
chr15:17100826-17100541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
612-904
               

               
Cow position:
               
chr15:23697026-23696741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
612-904
               

               
Cow position:
               
chr15:26896822-26896539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
18, 225
               

               
Conread position:
               
612-904
               

               
Cow position:
               
chr15:40957456-40957748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
82, 134
               

               
Conread position:
               
613-783
               

               
Cow position:
               
chr15:5710291-5710451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
613-801
               

               
Cow position:
               
chr15:17124593-17124401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 130
               

               
Conread position:
               
613-807
               

               
Cow position:
               
chr15:15025049-15025226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
613-846
               

               
Cow position:
               
chr15:30316683-30316455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
613-898
               

               
Cow position:
               
chr15:4418525-4418239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 116
               

               
Conread position:
               
613-902
               

               
Cow position:
               
chr15:26919390-26919108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
613-904
               

               
Cow position:
               
chr15:39598124-39598412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 81
               

               
Conread position:
               
614-812
               

               
Cow position:
               
chr15:25451880-25452088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
614-895
               

               
Cow position:
               
chr15:17084083-17084376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
614-902
               

               
Cow position:
               
chr15:14987875-14988157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 82
               

               
Conread position:
               
614-904
               

               
Cow position:
               
chr15:1502790-1503075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
614-904
               

               
Cow position:
               
chr15:23572810-23572515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
16, 114
               

               
Conread position:
               
615-762
               

               
Cow position:
               
chr15:49959418-49959559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
615-818
               

               
Cow position:
               
chr15:28098993-28099196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
97, 40
               

               
Conread position:
               
615-851
               

               
Cow position:
               
chr15:21520022-21520268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 203
               

               
Conread position:
               
615-862
               

               
Cow position:
               
chr15:30986405-30986167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
67, 74
               

               
Conread position:
               
615-865
               

               
Cow position:
               
chr15:47844208-47843961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
615-884
               

               
Cow position:
               
chr15:38827434-38827175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
256, 86
               

               
Conread position:
               
615-891
               

               
Cow position:
               
chr15:36952318-36952043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
232, 40
               

               
Conread position:
               
615-891
               

               
Cow position:
               
chr15:47042762-47042471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
615-892
               

               
Cow position:
               
chr15:4694632-4694903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
240, 28
               

               
Conread position:
               
615-900
               

               
Cow position:
               
chr15:36846307-36846009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 183
               

               
Conread position:
               
615-903
               

               
Cow position:
               
chr15:1722961-1722682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
615-904
               

               
Cow position:
               
chr15:17870411-17870116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
71, 250
               

               
Conread position:
               
616-832
               

               
Cow position:
               
chr15:26529778-26529988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
616-859
               

               
Cow position:
               
chr15:6037564-6037328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
121, 69
               

               
Conread position:
               
616-860
               

               
Cow position:
               
chr15:26158718-26158474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
9, 185
               

               
Conread position:
               
616-863
               

               
Cow position:
               
chr15:50332857-50333110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
90, 172
               

               
Conread position:
               
616-886
               

               
Cow position:
               
chr15:32234430-32234179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
239, 35
               

               
Conread position:
               
616-901
               

               
Cow position:
               
chr15:36391551-36391841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
13, 133
               

               
Conread position:
               
616-904
               

               
Cow position:
               
chr15:35425910-35425644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
617-797
               

               
Cow position:
               
chr15:33897705-33897887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
617-815
               

               
Cow position:
               
chr15:44119587-44119390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
617-820
               

               
Cow position:
               
chr15:41534537-41534736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 83
               

               
Conread position:
               
617-835
               

               
Cow position:
               
chr15:23798639-23798429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
617-855
               

               
Cow position:
               
chr15:24031078-24031321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
20, 103
               

               
Conread position:
               
617-902
               

               
Cow position:
               
chr15:11996145-11995859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
81, 109
               

               
Conread position:
               
617-904
               

               
Cow position:
               
chr15:14888753-14888471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
238, 21
               

               
Conread position:
               
618-795
               

               
Cow position:
               
chr15:44089282-44089102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
618-812
               

               
Cow position:
               
chr15:4500582-4500781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
67, 113
               

               
Conread position:
               
618-871
               

               
Cow position:
               
chr15:40834999-40835251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
245, 89
               

               
Conread position:
               
618-878
               

               
Cow position:
               
chr15:49483510-49483770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
82, 107
               

               
Conread position:
               
618-896
               

               
Cow position:
               
chr15:39299435-39299159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 123
               

               
Conread position:
               
618-898
               

               
Cow position:
               
chr15:24994627-24994350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
618-902
               

               
Cow position:
               
chr15:46563596-46563324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
618-903
               

               
Cow position:
               
chr15:14505327-14505594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
618-904
               

               
Cow position:
               
chr15:12722967-12723256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 213
               

               
Conread position:
               
618-904
               

               
Cow position:
               
chr15:43914216-43913921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 128
               

               
Conread position:
               
619-764
               

               
Cow position:
               
chr15:9128782-9128641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
619-794
               

               
Cow position:
               
chr15:8331312-8331142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
619-896
               

               
Cow position:
               
chr15:36793617-36793323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 127
               

               
Conread position:
               
619-902
               

               
Cow position:
               
chr15:41056324-41056037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
619-904
               

               
Cow position:
               
chr15:39286527-39286243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
11, 126
               

               
Conread position:
               
619-904
               

               
Cow position:
               
chr15:43626349-43626637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
24, 236
               

               
Conread position:
               
619-904
               

               
Cow position:
               
chr15:49922020-49922305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
246, 95
               

               
Conread position:
               
619-904
               

               
Cow position:
               
chr15:53716319-53716602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 104
               

               
Conread position:
               
620-756
               

               
Cow position:
               
chr15:13513420-13513554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
620-783
               

               
Cow position:
               
chr15:49230427-49230268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
620-842
               

               
Cow position:
               
chr15:19002397-19002168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
620-856
               

               
Cow position:
               
chr15:21903522-21903290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
620-884
               

               
Cow position:
               
chr15:28038678-28038927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
224, 22
               

               
Conread position:
               
620-895
               

               
Cow position:
               
chr15:20487315-20487045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 37
               

               
Conread position:
               
620-902
               

               
Cow position:
               
chr15:795133-794847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
9, 90
               

               
Conread position:
               
620-902
               

               
Cow position:
               
chr15:41528080-41527809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
620-902
               

               
Cow position:
               
chr15:50322497-50322763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
246, 49
               

               
Conread position:
               
620-903
               

               
Cow position:
               
chr15:26912183-26911908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
621-903
               

               
Cow position:
               
chr15:16261217-16261482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
244, 85
               

               
Conread position:
               
622-851
               

               
Cow position:
               
chr15:24982294-24982061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
13, 96
               

               
Conread position:
               
622-902
               

               
Cow position:
               
chr15:17233074-17233359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 130
               

               
Conread position:
               
622-904
               

               
Cow position:
               
chr15:10457142-10456843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 173
               

               
Conread position:
               
622-904
               

               
Cow position:
               
chr15:14576217-14576504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
623-902
               

               
Cow position:
               
chr15:31929010-31928731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
7, 235
               

               
Conread position:
               
623-904
               

               
Cow position:
               
chr15:52611176-52611479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
78, 195
               

               
Conread position:
               
625-777
               

               
Cow position:
               
chr15:14969409-14969556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
36, 84
               

               
Conread position:
               
625-812
               

               
Cow position:
               
chr15:20566808-20566990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
625-815
               

               
Cow position:
               
chr15:12974225-12974420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
75, 112
               

               
Conread position:
               
625-823
               

               
Cow position:
               
chr15:15992750-15992554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 28
               

               
Conread position:
               
625-853
               

               
Cow position:
               
chr15:38652712-38652482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 107
               

               
Conread position:
               
625-887
               

               
Cow position:
               
chr15:49784390-49784132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
625-901
               

               
Cow position:
               
chr15:13432373-13432660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
84, 277
               

               
Conread position:
               
625-902
               

               
Cow position:
               
chr15:9106935-9107203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
241, 27
               

               
Conread position:
               
625-902
               

               
Cow position:
               
chr15:16112285-16112567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
65, 256
               

               
Conread position:
               
625-902
               

               
Cow position:
               
chr15:20391386-20391107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 34
               

               
Conread position:
               
625-902
               

               
Cow position:
               
chr15:32324317-32324039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
73, 165
               

               
Conread position:
               
625-902
               

               
Cow position:
               
chr15:36259706-36259435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 57
               

               
Conread position:
               
625-902
               

               
Cow position:
               
chr15:38883033-38883319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 175
               

               
Conread position:
               
625-904
               

               
Cow position:
               
chr15:662573-662298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 75
               

               
Conread position:
               
625-904
               

               
Cow position:
               
chr15:4179048-4178767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
109, 79
               

               
Conread position:
               
625-904
               

               
Cow position:
               
chr15:30047663-30047373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 108
               

               
Conread position:
               
625-911
               

               
Cow position:
               
chr15:5717610-5717889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
95, 67
               

               
Conread position:
               
625-920
               

               
Cow position:
               
chr15:22938876-22938576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
71, 124
               

               
Conread position:
               
626-818
               

               
Cow position:
               
chr15:5690994-5691182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 97
               

               
Conread position:
               
626-863
               

               
Cow position:
               
chr15:26851332-26851097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
174, 78
               

               
Conread position:
               
628-903
               

               
Cow position:
               
chr15:24797909-24797643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
213, 71
               

               
Conread position:
               
629-804
               

               
Cow position:
               
chr15:12913604-12913428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
629-834
               

               
Cow position:
               
chr15:41475932-41475731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
629-864
               

               
Cow position:
               
chr15:31637190-31637432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
629-902
               

               
Cow position:
               
chr15:36887734-36887993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
629-904
               

               
Cow position:
               
chr15:11011698-11011435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
629-917
               

               
Cow position:
               
chr15:1989998-1990288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
631-898
               

               
Cow position:
               
chr15:25906815-25907081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
217, 75
               

               
Conread position:
               
631-904
               

               
Cow position:
               
chr15:6969882-6970158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
631-904
               

               
Cow position:
               
chr15:18671552-18671283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
205, 29
               

               
Conread position:
               
631-905
               

               
Cow position:
               
chr15:5420985-5420710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 76
               

               
Conread position:
               
632-895
               

               
Cow position:
               
chr15:49131957-49132208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
632-896
               

               
Cow position:
               
chr15:22553643-22553377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
225, 153
               

               
Conread position:
               
632-902
               

               
Cow position:
               
chr15:10246097-10245837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
68, 144
               

               
Conread position:
               
632-904
               

               
Cow position:
               
chr15:1330211-1329933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
60, 225
               

               
Conread position:
               
632-904
               

               
Cow position:
               
chr15:10442613-10442334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
53, 200
               

               
Conread position:
               
634-902
               

               
Cow position:
               
chr15:35112973-35112714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
178, 18
               

               
Conread position:
               
634-902
               

               
Cow position:
               
chr15:40379112-40379379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
97, 75
               

               
Conread position:
               
635-812
               

               
Cow position:
               
chr15:21363052-21362877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
108, 64
               

               
Conread position:
               
635-818
               

               
Cow position:
               
chr15:30001597-30001778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
635-871
               

               
Cow position:
               
chr15:25349875-25350106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
635-898
               

               
Cow position:
               
chr15:13783067-13782804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
50, 90
               

               
Conread position:
               
635-898
               

               
Cow position:
               
chr15:38860231-38859965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
75, 119
               

               
Conread position:
               
635-902
               

               
Cow position:
               
chr15:14870656-14870911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
227, 46
               

               
Conread position:
               
635-902
               

               
Cow position:
               
chr15:21608822-21608557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
76, 106
               

               
Conread position:
               
635-904
               

               
Cow position:
               
chr15:85345-85081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 140
               

               
Conread position:
               
635-904
               

               
Cow position:
               
chr15:16822851-16823107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
207, 16
               

               
Conread position:
               
636-821
               

               
Cow position:
               
chr15:48326326-48326144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
636-825
               

               
Cow position:
               
chr15:10049412-10049222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 153
               

               
Conread position:
               
636-835
               

               
Cow position:
               
chr15:4485050-4485255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
636-902
               

               
Cow position:
               
chr15:1297648-1297905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
636-903
               

               
Cow position:
               
chr15:9465576-9465846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
64, 105
               

               
Conread position:
               
636-903
               

               
Cow position:
               
chr15:21803763-21803492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 128
               

               
Conread position:
               
636-903
               

               
Cow position:
               
chr15:33306022-33306278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
219, 28
               

               
Conread position:
               
636-904
               

               
Cow position:
               
chr15:17337274-17337528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
636-904
               

               
Cow position:
               
chr15:31857491-31857758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 44
               

               
Conread position:
               
637-858
               

               
Cow position:
               
chr15:27063614-27063397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
185, 15
               

               
Conread position:
               
637-902
               

               
Cow position:
               
chr15:33642993-33643260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
638-831
               

               
Cow position:
               
chr15:17196049-17196245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
71, 110
               

               
Conread position:
               
638-835
               

               
Cow position:
               
chr15:10880977-10880783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
638-842
               

               
Cow position:
               
chr15:921656-921853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
638-887
               

               
Cow position:
               
chr15:244686-244939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
68, 28
               

               
Conread position:
               
638-904
               

               
Cow position:
               
chr15:8353945-8354213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 0
               

               
Conread position:
               
645-895
               

               
Cow position:
               
chr15:26404199-26404443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
647-904
               

               
Cow position:
               
chr15:38806592-38806334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 93
               

               
Conread position:
               
654-896
               

               
Cow position:
               
chr15:12203466-12203712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 88
               

               
Conread position:
               
657-904
               

               
Cow position:
               
chr15:21907866-21908105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
662-894
               

               
Cow position:
               
chr15:32977910-32977685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
204, 23
               

               
Conread position:
               
670-904
               

               
Cow position:
               
chr15:12655980-12655745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
167, 182
               

               
Conread position:
               
686-905
               

               
Cow position:
               
chr15:49257819-49258033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
688-880
               

               
Cow position:
               
chr15:14281504-14281697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
153, 26
               

               
Conread position:
               
689-904
               

               
Cow position:
               
chr15:42789194-42788978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 162
               

               
Conread position:
               
690-892
               

               
Cow position:
               
chr15:39316885-39316676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
145, 24
               

               
Conread position:
               
691-859
               

               
Cow position:
               
chr15:11912599-11912434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
691-886
               

               
Cow position:
               
chr15:50660581-50660782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
691-904
               

               
Cow position:
               
chr15:13554310-13554523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
170, 146
               

               
Conread position:
               
693-897
               

               
Cow position:
               
chr15:14176539-14176337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
693-905
               

               
Cow position:
               
chr15:35441116-35440905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
141, 14
               

               
Conread position:
               
693-945
               

               
Cow position:
               
chr15:26718960-26718711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
162, 14
               

               
Conread position:
               
696-887
               

               
Cow position:
               
chr15:78538-78726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
128, 18
               

               
Conread position:
               
700-912
               

               
Cow position:
               
chr15:17162162-17162370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
190, 15
               

               
Conread position:
               
703-904
               

               
Cow position:
               
chr15:34207216-34207020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
172, 12
               

               
Conread position:
               
704-887
               

               
Cow position:
               
chr15:44237388-44237571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
161, 10
               

               
Conread position:
               
704-904
               

               
Cow position:
               
chr15:20351803-20352000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
705-885
               

               
Cow position:
               
chr15:40594534-40594351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
705-896
               

               
Cow position:
               
chr15:5657807-5658001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
705-904
               

               
Cow position:
               
chr15:6530875-6530678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
707-891
               

               
Cow position:
               
chr15:10563530-10563344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
707-904
               

               
Cow position:
               
chr15:10335729-10335926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
708-889
               

               
Cow position:
               
chr15:41087928-41087744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
709-890
               

               
Cow position:
               
chr15:22442302-22442117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
709-895
               

               
Cow position:
               
chr15:37284428-37284616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
138, 171
               

               
Conread position:
               
709-904
               

               
Cow position:
               
chr15:16307397-16307582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
710-875
               

               
Cow position:
               
chr15:30794956-30795124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
134, 74
               

               
Conread position:
               
710-886
               

               
Cow position:
               
chr15:25650434-25650269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
710-897
               

               
Cow position:
               
chr15:9497524-9497337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
156, 139
               

               
Conread position:
               
710-904
               

               
Cow position:
               
chr15:16908409-16908601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
710-904
               

               
Cow position:
               
chr15:31175769-31175970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
710-904
               

               
Cow position:
               
chr15:48711078-48710883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
139, 72
               

               
Conread position:
               
711-904
               

               
Cow position:
               
chr15:21820966-21821158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
140, 23
               

               
Conread position:
               
714-895
               

               
Cow position:
               
chr15:43599169-43599350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
152, 137
               

               
Conread position:
               
714-904
               

               
Cow position:
               
chr15:10660575-10660382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
714-904
               

               
Cow position:
               
chr15:29330986-29331174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
153, 120
               

               
Conread position:
               
716-892
               

               
Cow position:
               
chr15:40415657-40415481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
716-904
               

               
Cow position:
               
chr15:5729923-5730111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
718-903
               

               
Cow position:
               
chr15:4093949-4093764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
142, 131
               

               
Conread position:
               
719-896
               

               
Cow position:
               
chr15:6905062-6905234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
720-886
               

               
Cow position:
               
chr15:39090282-39090444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
724-891
               

               
Cow position:
               
chr15:52809592-52809426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
88, 114
               

               
Conread position:
               
726-904
               

               
Cow position:
               
chr15:24128023-24128201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 59
               

               
Conread position:
               
730-896
               

               
Cow position:
               
chr15:23568131-23567966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
132, 121
               

               
Conread position:
               
731-902
               

               
Cow position:
               
chr15:3726121-3726290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
732-887
               

               
Cow position:
               
chr15:41360952-41360799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 96
               

               
Conread position:
               
737-882
               

               
Cow position:
               
chr15:34751092-34751233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
741-904
               

               
Cow position:
               
chr15:13515373-13515538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
741-904
               

               
Cow position:
               
chr15:18647388-18647547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
121, 5
               

               
Conread position:
               
770-904
               

               
Cow position:
               
chr15:38877268-38877136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 121
               
Show alignments to all cow chromosomes.