Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rspl03_j14.5
        

               Conread position:
               554-863
               

               Cow position:
               chr3:75173354-75173643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               51, 7
               

               Conread position:
               590-904
               

               Cow position:
               chr3:67744431-67744731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               39, 66
               

               Conread position:
               591-828
               

               Cow position:
               chr3:67407160-67407395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               591-898
               

               Cow position:
               chr3:30180293-30179983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               38, 110
               

               Conread position:
               591-902
               

               Cow position:
               chr3:2392763-2393065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               173, 11
               

               Conread position:
               593-804
               

               Cow position:
               chr3:15859178-15859384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               143, 16
               

               Conread position:
               594-856
               

               Cow position:
               chr3:48810436-48810702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               86, 7
               

               Conread position:
               594-902
               

               Cow position:
               chr3:43233709-43233406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               31, 10
               

               Conread position:
               594-902
               

               Cow position:
               chr3:55970721-55970404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               38, 154
               

               Conread position:
               596-880
               

               Cow position:
               chr3:76270093-76269816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               13, 105
               

               Conread position:
               598-904
               

               Cow position:
               chr3:48253082-48252780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               33, 89
               

               Conread position:
               599-835
               

               Cow position:
               chr3:57577897-57577661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               11, 71
               

               Conread position:
               600-902
               

               Cow position:
               chr3:10958045-10958345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 56
               

               Conread position:
               601-902
               

               Cow position:
               chr3:67519978-67520274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               195, 110
               

               Conread position:
               601-904
               

               Cow position:
               chr3:39969663-39969972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               602-777
               

               Cow position:
               chr3:16868022-16867845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 138
               

               Conread position:
               602-812
               

               Cow position:
               chr3:28902565-28902772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               129, 106
               

               Conread position:
               602-853
               

               Cow position:
               chr3:3947233-3946984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               73, 48
               

               Conread position:
               602-902
               

               Cow position:
               chr3:29813426-29813142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               16, 87
               

               Conread position:
               603-801
               

               Cow position:
               chr3:23037312-23037511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               110, 71
               

               Conread position:
               603-810
               

               Cow position:
               chr3:26337818-26338031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               28, 132
               

               Conread position:
               605-896
               

               Cow position:
               chr3:52608375-52608083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               101, 110
               

               Conread position:
               605-902
               

               Cow position:
               chr3:71238668-71238371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               44, 26
               

               Conread position:
               606-854
               

               Cow position:
               chr3:82629506-82629261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               49, 73
               

               Conread position:
               606-898
               

               Cow position:
               chr3:32585346-32585054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               60, 107
               

               Conread position:
               606-898
               

               Cow position:
               chr3:60264528-60264816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 39
               

               Conread position:
               607-846
               

               Cow position:
               chr3:5305995-5305751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               100, 49
               

               Conread position:
               607-869
               

               Cow position:
               chr3:54067984-54067728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               103, 23
               

               Conread position:
               607-896
               

               Cow position:
               chr3:7337595-7337878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               75, 48
               

               Conread position:
               607-901
               

               Cow position:
               chr3:64280746-64281033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               195, 101
               

               Conread position:
               607-902
               

               Cow position:
               chr3:65969364-65969059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               95, 17
               

               Conread position:
               608-811
               

               Cow position:
               chr3:28883972-28884173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               608-847
               

               Cow position:
               chr3:73335472-73335236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 50
               

               Conread position:
               608-887
               

               Cow position:
               chr3:31804579-31804849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               180, 86
               

               Conread position:
               608-904
               

               Cow position:
               chr3:17936655-17936945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               22, 101
               

               Conread position:
               608-904
               

               Cow position:
               chr3:53738989-53739290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               23, 114
               

               Conread position:
               608-904
               

               Cow position:
               chr3:57764402-57764123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               608-904
               

               Cow position:
               chr3:65058894-65058597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               15, 219
               

               Conread position:
               608-905
               

               Cow position:
               chr3:78077379-78077084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 16
               

               Conread position:
               609-794
               

               Cow position:
               chr3:26977727-26977539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               146, 46
               

               Conread position:
               609-804
               

               Cow position:
               chr3:44594816-44594619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 177
               

               Conread position:
               609-815
               

               Cow position:
               chr3:25037813-25038008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               609-815
               

               Cow position:
               chr3:76056097-76056301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               21, 91
               

               Conread position:
               609-830
               

               Cow position:
               chr3:4120179-4120397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               22, 89
               

               Conread position:
               609-861
               

               Cow position:
               chr3:24596233-24596480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               44, 31
               

               Conread position:
               609-866
               

               Cow position:
               chr3:47316188-47316445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               119, 142
               

               Conread position:
               609-889
               

               Cow position:
               chr3:21866847-21867128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 94
               

               Conread position:
               609-898
               

               Cow position:
               chr3:210512-210217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               609-902
               

               Cow position:
               chr3:14601522-14601814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               102, 47
               

               Conread position:
               609-902
               

               Cow position:
               chr3:49118840-49119128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               122, 100
               

               Conread position:
               609-902
               

               Cow position:
               chr3:63269425-63269120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 130
               

               Conread position:
               609-903
               

               Cow position:
               chr3:57704522-57704219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               187, 90
               

               Conread position:
               609-904
               

               Cow position:
               chr3:18059896-18059597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               20, 138
               

               Conread position:
               609-904
               

               Cow position:
               chr3:30940995-30940708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               225
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               91, 41
               

               Conread position:
               609-918
               

               Cow position:
               chr3:22165224-22165536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 178
               

               Conread position:
               609-927
               

               Cow position:
               chr3:3656705-3656386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               91, 46
               

               Conread position:
               610-783
               

               Cow position:
               chr3:57641992-57641816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               81, 164
               

               Conread position:
               610-793
               

               Cow position:
               chr3:68094343-68094150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               610-798
               

               Cow position:
               chr3:21959854-21959660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               102, 66
               

               Conread position:
               610-798
               

               Cow position:
               chr3:77654109-77653929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               610-801
               

               Cow position:
               chr3:2016622-2016433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               20, 99
               

               Conread position:
               610-802
               

               Cow position:
               chr3:18699917-18700114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               19, 133
               

               Conread position:
               610-805
               

               Cow position:
               chr3:70333038-70333227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               20, 102
               

               Conread position:
               610-809
               

               Cow position:
               chr3:23818676-23818481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               610-811
               

               Cow position:
               chr3:43388935-43389140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               20, 133
               

               Conread position:
               610-814
               

               Cow position:
               chr3:82424892-82425096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               178, 26
               

               Conread position:
               610-820
               

               Cow position:
               chr3:51150321-51150107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 39
               

               Conread position:
               610-835
               

               Cow position:
               chr3:6728130-6728366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 139
               

               Conread position:
               610-835
               

               Cow position:
               chr3:15973759-15973530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               99, 133
               

               Conread position:
               610-835
               

               Cow position:
               chr3:40212844-40213069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 106
               

               Conread position:
               610-835
               

               Cow position:
               chr3:41863817-41863588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 103
               

               Conread position:
               610-836
               

               Cow position:
               chr3:35624352-35624582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 144
               

               Conread position:
               610-839
               

               Cow position:
               chr3:22924190-22924415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               20, 101
               

               Conread position:
               610-851
               

               Cow position:
               chr3:53604554-53604800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               20, 132
               

               Conread position:
               610-857
               

               Cow position:
               chr3:69650709-69650947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               83, 42
               

               Conread position:
               610-861
               

               Cow position:
               chr3:51608994-51609247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               26, 132
               

               Conread position:
               610-864
               

               Cow position:
               chr3:59933568-59933305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               87, 26
               

               Conread position:
               610-866
               

               Cow position:
               chr3:79271518-79271779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 79
               

               Conread position:
               610-880
               

               Cow position:
               chr3:27976332-27976607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               34, 78
               

               Conread position:
               610-886
               

               Cow position:
               chr3:59605031-59604758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 104
               

               Conread position:
               610-887
               

               Cow position:
               chr3:69785430-69785714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               610-889
               

               Cow position:
               chr3:59299762-59299486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               154, 98
               

               Conread position:
               610-890
               

               Cow position:
               chr3:51033561-51033278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               86, 50
               

               Conread position:
               610-894
               

               Cow position:
               chr3:77188629-77188342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               87, 136
               

               Conread position:
               610-898
               

               Cow position:
               chr3:9662979-9663270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               20, 219
               

               Conread position:
               610-901
               

               Cow position:
               chr3:26992764-26992465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               19, 132
               

               Conread position:
               610-901
               

               Cow position:
               chr3:53271023-53270728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               21, 132
               

               Conread position:
               610-901
               

               Cow position:
               chr3:75853145-75853431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 51
               

               Conread position:
               610-902
               

               Cow position:
               chr3:13301658-13301950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               24, 75
               

               Conread position:
               610-902
               

               Cow position:
               chr3:26982241-26981964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 44
               

               Conread position:
               610-902
               

               Cow position:
               chr3:48468367-48468080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 145
               

               Conread position:
               610-902
               

               Cow position:
               chr3:53318601-53318302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               21, 110
               

               Conread position:
               610-902
               

               Cow position:
               chr3:53910296-53910010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               20, 46
               

               Conread position:
               610-902
               

               Cow position:
               chr3:59649443-59649153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               20, 47
               

               Conread position:
               610-902
               

               Cow position:
               chr3:72474112-72473810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               20, 137
               

               Conread position:
               610-902
               

               Cow position:
               chr3:73237376-73237091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               26, 97
               

               Conread position:
               610-902
               

               Cow position:
               chr3:75080941-75080665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               610-902
               

               Cow position:
               chr3:83491270-83490984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 86
               

               Conread position:
               610-903
               

               Cow position:
               chr3:50768870-50768579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 107
               

               Conread position:
               610-903
               

               Cow position:
               chr3:73915639-73915906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               22, 66
               

               Conread position:
               610-904
               

               Cow position:
               chr3:1830383-1830679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 134
               

               Conread position:
               610-904
               

               Cow position:
               chr3:16752065-16752364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               98, 180
               

               Conread position:
               610-904
               

               Cow position:
               chr3:26066176-26065899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               51, 98
               

               Conread position:
               610-904
               

               Cow position:
               chr3:26681633-26681908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               61, 15
               

               Conread position:
               610-904
               

               Cow position:
               chr3:27274716-27274425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 98
               

               Conread position:
               610-904
               

               Cow position:
               chr3:31309164-31309458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 46
               

               Conread position:
               610-904
               

               Cow position:
               chr3:54946313-54946024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               610-904
               

               Cow position:
               chr3:58134493-58134792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 131
               

               Conread position:
               610-904
               

               Cow position:
               chr3:58317753-58318058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               610-904
               

               Cow position:
               chr3:76922484-76922767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 86
               

               Conread position:
               610-904
               

               Cow position:
               chr3:80565153-80564859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 21
               

               Conread position:
               610-905
               

               Cow position:
               chr3:34871758-34871459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               20, 147
               

               Conread position:
               611-783
               

               Cow position:
               chr3:66884841-66885014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               19, 106
               

               Conread position:
               611-798
               

               Cow position:
               chr3:4071578-4071769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 139
               

               Conread position:
               611-810
               

               Cow position:
               chr3:38331420-38331623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               20, 122
               

               Conread position:
               611-810
               

               Cow position:
               chr3:78071604-78071802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               111, 97
               

               Conread position:
               611-812
               

               Cow position:
               chr3:63860421-63860624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 130
               

               Conread position:
               611-825
               

               Cow position:
               chr3:18479107-18479324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 132
               

               Conread position:
               611-831
               

               Cow position:
               chr3:23203041-23203263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               88, 145
               

               Conread position:
               611-834
               

               Cow position:
               chr3:18831606-18831386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               168, 97
               

               Conread position:
               611-834
               

               Cow position:
               chr3:56948908-56949123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               611-835
               

               Cow position:
               chr3:5040111-5040343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               25, 122
               

               Conread position:
               611-841
               

               Cow position:
               chr3:77276279-77276500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               611-855
               

               Cow position:
               chr3:81234576-81234329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               226, 105
               

               Conread position:
               611-863
               

               Cow position:
               chr3:13240883-13241140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               19, 251
               

               Conread position:
               611-863
               

               Cow position:
               chr3:13380091-13380340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               138, 26
               

               Conread position:
               611-863
               

               Cow position:
               chr3:53428728-53428979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               18, 106
               

               Conread position:
               611-884
               

               Cow position:
               chr3:10591326-10591603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               165, 25
               

               Conread position:
               611-894
               

               Cow position:
               chr3:4549205-4548920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               242, 46
               

               Conread position:
               611-894
               

               Cow position:
               chr3:49363297-49363020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 99
               

               Conread position:
               611-897
               

               Cow position:
               chr3:47753426-47753126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               611-902
               

               Cow position:
               chr3:175132-174845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 52
               

               Conread position:
               611-902
               

               Cow position:
               chr3:3889389-3889669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               206, 96
               

               Conread position:
               611-902
               

               Cow position:
               chr3:3985500-3985225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               257, 19
               

               Conread position:
               611-902
               

               Cow position:
               chr3:23168880-23169168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               107, 44
               

               Conread position:
               611-904
               

               Cow position:
               chr3:9641745-9641461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 99
               

               Conread position:
               611-904
               

               Cow position:
               chr3:19793087-19792789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 46
               

               Conread position:
               611-904
               

               Cow position:
               chr3:22232479-22232756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               19, 47
               

               Conread position:
               611-904
               

               Cow position:
               chr3:68587209-68586916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 91
               

               Conread position:
               611-904
               

               Cow position:
               chr3:71238335-71238052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               611-907
               

               Cow position:
               chr3:81087448-81087739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               87, 139
               

               Conread position:
               612-775
               

               Cow position:
               chr3:75908098-75907935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               47, 102
               

               Conread position:
               612-784
               

               Cow position:
               chr3:77665363-77665536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 105
               

               Conread position:
               612-812
               

               Cow position:
               chr3:76168441-76168645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 131
               

               Conread position:
               612-820
               

               Cow position:
               chr3:73589579-73589792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               612-821
               

               Cow position:
               chr3:59947856-59947643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               18, 124
               

               Conread position:
               612-832
               

               Cow position:
               chr3:59828201-59828426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               612-859
               

               Cow position:
               chr3:68004522-68004763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               237, 22
               

               Conread position:
               612-895
               

               Cow position:
               chr3:75480185-75479905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               83, 88
               

               Conread position:
               612-896
               

               Cow position:
               chr3:70896225-70895950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               612-898
               

               Cow position:
               chr3:56678162-56678452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               98, 30
               

               Conread position:
               612-900
               

               Cow position:
               chr3:14465526-14465813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 45
               

               Conread position:
               612-902
               

               Cow position:
               chr3:4268386-4268685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               18, 130
               

               Conread position:
               612-903
               

               Cow position:
               chr3:48900143-48900442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               94, 185
               

               Conread position:
               612-903
               

               Cow position:
               chr3:55819937-55819647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 103
               

               Conread position:
               612-904
               

               Cow position:
               chr3:76713125-76713428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               73, 195
               

               Conread position:
               612-904
               

               Cow position:
               chr3:83454969-83455254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               613-769
               

               Cow position:
               chr3:8540688-8540537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               613-793
               

               Cow position:
               chr3:44782525-44782345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 112
               

               Conread position:
               613-793
               

               Cow position:
               chr3:64909907-64910090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 103
               

               Conread position:
               613-800
               

               Cow position:
               chr3:17531550-17531739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               613-820
               

               Cow position:
               chr3:6886412-6886200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               613-830
               

               Cow position:
               chr3:73421297-73421524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               613-840
               

               Cow position:
               chr3:81616264-81616493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               97, 196
               

               Conread position:
               613-847
               

               Cow position:
               chr3:75107959-75107726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               17, 102
               

               Conread position:
               613-852
               

               Cow position:
               chr3:11281956-11281713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               17, 130
               

               Conread position:
               613-852
               

               Cow position:
               chr3:20841693-20841926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               32, 71
               

               Conread position:
               613-854
               

               Cow position:
               chr3:8349385-8349620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               188, 42
               

               Conread position:
               613-887
               

               Cow position:
               chr3:48459143-48459420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               119, 102
               

               Conread position:
               613-895
               

               Cow position:
               chr3:21112455-21112738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 108
               

               Conread position:
               613-895
               

               Cow position:
               chr3:62046858-62046565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               17, 133
               

               Conread position:
               613-898
               

               Cow position:
               chr3:23471278-23471565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               224, 23
               

               Conread position:
               613-901
               

               Cow position:
               chr3:24468196-24468480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 46
               

               Conread position:
               613-902
               

               Cow position:
               chr3:7763845-7763554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               21, 120
               

               Conread position:
               613-902
               

               Cow position:
               chr3:55318710-55319005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               16, 126
               

               Conread position:
               613-902
               

               Cow position:
               chr3:68707836-68708106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               213
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               120, 95
               

               Conread position:
               613-902
               

               Cow position:
               chr3:68880945-68881214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               613-904
               

               Cow position:
               chr3:17331906-17331622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               17, 66
               

               Conread position:
               613-904
               

               Cow position:
               chr3:54781807-54782121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               80, 129
               

               Conread position:
               613-904
               

               Cow position:
               chr3:55177565-55177855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 94
               

               Conread position:
               613-904
               

               Cow position:
               chr3:76156172-76155883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               613-905
               

               Cow position:
               chr3:17456080-17456373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               17, 128
               

               Conread position:
               614-807
               

               Cow position:
               chr3:56943745-56943934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               614-810
               

               Cow position:
               chr3:4518000-4518192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               92, 22
               

               Conread position:
               614-818
               

               Cow position:
               chr3:50350793-50350988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               159, 88
               

               Conread position:
               614-835
               

               Cow position:
               chr3:71423384-71423587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               614-887
               

               Cow position:
               chr3:31349925-31350193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               247, 21
               

               Conread position:
               614-894
               

               Cow position:
               chr3:14553059-14552782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               17, 87
               

               Conread position:
               614-897
               

               Cow position:
               chr3:72342434-72342147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 130
               

               Conread position:
               614-898
               

               Cow position:
               chr3:22221511-22221221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               223, 94
               

               Conread position:
               614-902
               

               Cow position:
               chr3:54373672-54373961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               92, 110
               

               Conread position:
               614-902
               

               Cow position:
               chr3:59945312-59945023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               111, 126
               

               Conread position:
               614-902
               

               Cow position:
               chr3:71496941-71497246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               614-903
               

               Cow position:
               chr3:12705363-12705649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 11
               

               Conread position:
               614-903
               

               Cow position:
               chr3:59597356-59597080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               250, 11
               

               Conread position:
               614-904
               

               Cow position:
               chr3:51403082-51402804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               16, 93
               

               Conread position:
               614-904
               

               Cow position:
               chr3:59610532-59610825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 73
               

               Conread position:
               614-904
               

               Cow position:
               chr3:68616150-68616431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               235, 91
               

               Conread position:
               614-904
               

               Cow position:
               chr3:73467811-73467519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               121, 41
               

               Conread position:
               614-926
               

               Cow position:
               chr3:58527563-58527266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               16, 86
               

               Conread position:
               615-812
               

               Cow position:
               chr3:32436823-32436627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 158
               

               Conread position:
               615-818
               

               Cow position:
               chr3:986200-985995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 124
               

               Conread position:
               615-820
               

               Cow position:
               chr3:73701682-73701483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               162, 25
               

               Conread position:
               615-830
               

               Cow position:
               chr3:26970996-26970782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               615-831
               

               Cow position:
               chr3:5703361-5703146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 118
               

               Conread position:
               615-884
               

               Cow position:
               chr3:64197007-64196739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 16
               

               Conread position:
               615-904
               

               Cow position:
               chr3:15051768-15052056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               96, 108
               

               Conread position:
               615-904
               

               Cow position:
               chr3:48241789-48241512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               238, 10
               

               Conread position:
               615-904
               

               Cow position:
               chr3:59474304-59474016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               238, 100
               

               Conread position:
               616-791
               

               Cow position:
               chr3:56103837-56103671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               616-804
               

               Cow position:
               chr3:55730281-55730474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 128
               

               Conread position:
               616-825
               

               Cow position:
               chr3:32248198-32247986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 127
               

               Conread position:
               616-832
               

               Cow position:
               chr3:32317646-32317865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               93, 123
               

               Conread position:
               616-898
               

               Cow position:
               chr3:83215452-83215161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               616-900
               

               Cow position:
               chr3:36375355-36375643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               79, 124
               

               Conread position:
               616-902
               

               Cow position:
               chr3:68156910-68156632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 44
               

               Conread position:
               616-904
               

               Cow position:
               chr3:45882082-45881799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               101, 235
               

               Conread position:
               616-904
               

               Cow position:
               chr3:48072703-48072988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 39
               

               Conread position:
               616-904
               

               Cow position:
               chr3:58764903-58765183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               220, 77
               

               Conread position:
               616-904
               

               Cow position:
               chr3:65237206-65236921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               617-778
               

               Cow position:
               chr3:22903576-22903732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               617-808
               

               Cow position:
               chr3:12899764-12899949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               617-820
               

               Cow position:
               chr3:27246785-27246980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               617-902
               

               Cow position:
               chr3:3883638-3883921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 91
               

               Conread position:
               617-903
               

               Cow position:
               chr3:13353546-13353258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 171
               

               Conread position:
               617-904
               

               Cow position:
               chr3:18426518-18426804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               131, 99
               

               Conread position:
               617-904
               

               Cow position:
               chr3:44624997-44625268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               89, 40
               

               Conread position:
               617-904
               

               Cow position:
               chr3:57274240-57273961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               153, 49
               

               Conread position:
               617-904
               

               Cow position:
               chr3:70333787-70334068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               83, 115
               

               Conread position:
               618-820
               

               Cow position:
               chr3:75966601-75966802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               116, 90
               

               Conread position:
               618-896
               

               Cow position:
               chr3:32310230-32310516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               11, 119
               

               Conread position:
               618-902
               

               Cow position:
               chr3:53592503-53592796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 124
               

               Conread position:
               618-902
               

               Cow position:
               chr3:60933600-60933311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               11, 121
               

               Conread position:
               618-902
               

               Cow position:
               chr3:76267794-76268081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               93, 18
               

               Conread position:
               618-902
               

               Cow position:
               chr3:77365111-77365400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               90, 31
               

               Conread position:
               618-903
               

               Cow position:
               chr3:79093881-79094151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               230, 18
               

               Conread position:
               618-904
               

               Cow position:
               chr3:2630939-2630690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               618-904
               

               Cow position:
               chr3:3316627-3316917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               74, 164
               

               Conread position:
               618-904
               

               Cow position:
               chr3:4461308-4461595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               618-904
               

               Cow position:
               chr3:36418306-36418571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               618-904
               

               Cow position:
               chr3:71231580-71231294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               12, 167
               

               Conread position:
               619-764
               

               Cow position:
               chr3:25290026-25289879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 98
               

               Conread position:
               619-815
               

               Cow position:
               chr3:47198944-47199143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               10, 36
               

               Conread position:
               619-837
               

               Cow position:
               chr3:44960127-44959904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 131
               

               Conread position:
               619-887
               

               Cow position:
               chr3:71474226-71474496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               197
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               11, 104
               

               Conread position:
               619-896
               

               Cow position:
               chr3:18607846-18607565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               10, 85
               

               Conread position:
               619-904
               

               Cow position:
               chr3:57754294-57754581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 89
               

               Conread position:
               620-794
               

               Cow position:
               chr3:24774821-24774658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               86, 36
               

               Conread position:
               620-794
               

               Cow position:
               chr3:74050527-74050697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               620-820
               

               Cow position:
               chr3:8522975-8523171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               91, 122
               

               Conread position:
               620-821
               

               Cow position:
               chr3:59681727-59681926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 80
               

               Conread position:
               620-896
               

               Cow position:
               chr3:6182054-6182310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               620-901
               

               Cow position:
               chr3:16333983-16333699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               78, 131
               

               Conread position:
               620-902
               

               Cow position:
               chr3:2506297-2506578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               80, 142
               

               Conread position:
               620-904
               

               Cow position:
               chr3:11063541-11063272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               16, 38
               

               Conread position:
               620-904
               

               Cow position:
               chr3:18687080-18686803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               248, 83
               

               Conread position:
               620-904
               

               Cow position:
               chr3:49328113-49327837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               620-904
               

               Cow position:
               chr3:65413087-65413384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               33, 112
               

               Conread position:
               620-904
               

               Cow position:
               chr3:74234360-74234086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               620-904
               

               Cow position:
               chr3:82019662-82019947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               7, 79
               

               Conread position:
               621-808
               

               Cow position:
               chr3:22868538-22868729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               621-810
               

               Cow position:
               chr3:41510756-41510565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               621-886
               

               Cow position:
               chr3:19682884-19682605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               621-904
               

               Cow position:
               chr3:70761945-70762227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 163
               

               Conread position:
               621-920
               

               Cow position:
               chr3:48363247-48362955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 86
               

               Conread position:
               622-783
               

               Cow position:
               chr3:2637122-2636965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               622-815
               

               Cow position:
               chr3:61023843-61024039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               622-901
               

               Cow position:
               chr3:73837541-73837818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               78, 128
               

               Conread position:
               622-904
               

               Cow position:
               chr3:61224572-61224853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               232, 81
               

               Conread position:
               623-866
               

               Cow position:
               chr3:56476851-56476615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               8, 49
               

               Conread position:
               623-902
               

               Cow position:
               chr3:73395292-73395019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 55
               

               Conread position:
               624-818
               

               Cow position:
               chr3:27286690-27286499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               625-778
               

               Cow position:
               chr3:22078252-22078096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               625-784
               

               Cow position:
               chr3:44725042-44724876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               625-788
               

               Cow position:
               chr3:77098650-77098812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               625-792
               

               Cow position:
               chr3:26393125-26393293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               625-792
               

               Cow position:
               chr3:43895889-43896053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               625-804
               

               Cow position:
               chr3:37641500-37641320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               85, 94
               

               Conread position:
               625-810
               

               Cow position:
               chr3:78258576-78258766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               67, 119
               

               Conread position:
               625-818
               

               Cow position:
               chr3:70402812-70402625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               625-819
               

               Cow position:
               chr3:68303492-68303292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               74, 123
               

               Conread position:
               625-820
               

               Cow position:
               chr3:31115104-31115291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               625-834
               

               Cow position:
               chr3:15160691-15160485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               625-836
               

               Cow position:
               chr3:18393227-18393431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               11, 90
               

               Conread position:
               625-842
               

               Cow position:
               chr3:7330964-7331166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               625-847
               

               Cow position:
               chr3:23131994-23132217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               625-857
               

               Cow position:
               chr3:79272402-79272632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               124, 89
               

               Conread position:
               625-858
               

               Cow position:
               chr3:49344866-49344634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               81, 30
               

               Conread position:
               625-859
               

               Cow position:
               chr3:71703632-71703418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               625-860
               

               Cow position:
               chr3:33002559-33002325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               123, 74
               

               Conread position:
               625-871
               

               Cow position:
               chr3:35075046-35074811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               625-902
               

               Cow position:
               chr3:2675207-2674926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               625-902
               

               Cow position:
               chr3:4319893-4319609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               50, 231
               

               Conread position:
               625-902
               

               Cow position:
               chr3:44960844-44961092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               625-904
               

               Cow position:
               chr3:15443552-15443834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               84, 116
               

               Conread position:
               625-904
               

               Cow position:
               chr3:18459363-18459625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               102, 30
               

               Conread position:
               625-904
               

               Cow position:
               chr3:22675933-22676201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               93, 74
               

               Conread position:
               625-904
               

               Cow position:
               chr3:23408190-23408456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               625-904
               

               Cow position:
               chr3:29359990-29360250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               45, 41
               

               Conread position:
               625-904
               

               Cow position:
               chr3:44932686-44932408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 90
               

               Conread position:
               625-904
               

               Cow position:
               chr3:53222186-53221910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 90
               

               Conread position:
               625-904
               

               Cow position:
               chr3:53790368-53790641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 44
               

               Conread position:
               625-904
               

               Cow position:
               chr3:55189576-55189861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 96
               

               Conread position:
               625-907
               

               Cow position:
               chr3:52651906-52652189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               151, 167
               

               Conread position:
               626-793
               

               Cow position:
               chr3:68565990-68565827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               626-904
               

               Cow position:
               chr3:54506879-54506599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 88
               

               Conread position:
               626-904
               

               Cow position:
               chr3:77582279-77582005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               94, 180
               

               Conread position:
               626-904
               

               Cow position:
               chr3:78093220-78093488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               626-904
               

               Cow position:
               chr3:79196936-79196655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               80, 257
               

               Conread position:
               627-898
               

               Cow position:
               chr3:45647838-45647579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               32, 82
               

               Conread position:
               627-904
               

               Cow position:
               chr3:1517341-1517617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               102, 81
               

               Conread position:
               628-902
               

               Cow position:
               chr3:7662028-7661750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               69, 161
               

               Conread position:
               628-903
               

               Cow position:
               chr3:74601283-74601008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               41, 78
               

               Conread position:
               629-793
               

               Cow position:
               chr3:19611183-19611346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               77, 86
               

               Conread position:
               629-830
               

               Cow position:
               chr3:52845725-52845520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               172, 87
               

               Conread position:
               629-833
               

               Cow position:
               chr3:46559546-46559749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 81
               

               Conread position:
               629-874
               

               Cow position:
               chr3:14547169-14546926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               231, 70
               

               Conread position:
               629-887
               

               Cow position:
               chr3:78092341-78092601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               629-896
               

               Cow position:
               chr3:74533504-74533252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               200
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               238, 78
               

               Conread position:
               629-897
               

               Cow position:
               chr3:75608658-75608399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               228, 75
               

               Conread position:
               629-899
               

               Cow position:
               chr3:10668709-10668980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               78, 88
               

               Conread position:
               629-902
               

               Cow position:
               chr3:19586034-19585759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 158
               

               Conread position:
               629-902
               

               Cow position:
               chr3:60597707-60597439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               99, 70
               

               Conread position:
               629-904
               

               Cow position:
               chr3:1037198-1036921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               57, 233
               

               Conread position:
               629-904
               

               Cow position:
               chr3:8061290-8061023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               232, 30
               

               Conread position:
               629-904
               

               Cow position:
               chr3:15950747-15951016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 80
               

               Conread position:
               629-904
               

               Cow position:
               chr3:17058377-17058645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               77, 87
               

               Conread position:
               629-921
               

               Cow position:
               chr3:31361593-31361298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               77, 62
               

               Conread position:
               630-894
               

               Cow position:
               chr3:17221964-17222240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               66, 94
               

               Conread position:
               631-903
               

               Cow position:
               chr3:75238628-75238354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               69, 110
               

               Conread position:
               632-830
               

               Cow position:
               chr3:20021435-20021238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               632-897
               

               Cow position:
               chr3:51233937-51234193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               222, 84
               

               Conread position:
               632-902
               

               Cow position:
               chr3:65019686-65019968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               26, 70
               

               Conread position:
               632-903
               

               Cow position:
               chr3:38864285-38864012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               142, 53
               

               Conread position:
               632-904
               

               Cow position:
               chr3:73299232-73298982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               634-840
               

               Cow position:
               chr3:8556676-8556875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               635-795
               

               Cow position:
               chr3:67942369-67942532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               75, 100
               

               Conread position:
               635-815
               

               Cow position:
               chr3:62370221-62370039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               65, 85
               

               Conread position:
               635-825
               

               Cow position:
               chr3:74644724-74644531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               75, 111
               

               Conread position:
               635-898
               

               Cow position:
               chr3:70609789-70609526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               72, 36
               

               Conread position:
               635-902
               

               Cow position:
               chr3:23920262-23920531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               65, 107
               

               Conread position:
               635-904
               

               Cow position:
               chr3:9117198-9116923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               40, 170
               

               Conread position:
               635-904
               

               Cow position:
               chr3:47417407-47417670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               78, 160
               

               Conread position:
               635-904
               

               Cow position:
               chr3:53150497-53150224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               61, 221
               

               Conread position:
               635-904
               

               Cow position:
               chr3:59000599-59000856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               635-904
               

               Cow position:
               chr3:59035207-59034933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               636-783
               

               Cow position:
               chr3:10115458-10115314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               636-835
               

               Cow position:
               chr3:19793427-19793626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               73, 97
               

               Conread position:
               636-846
               

               Cow position:
               chr3:26603383-26603602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               636-879
               

               Cow position:
               chr3:40145630-40145387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               73, 106
               

               Conread position:
               636-902
               

               Cow position:
               chr3:66900564-66900838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               64, 13
               

               Conread position:
               636-902
               

               Cow position:
               chr3:69416615-69416885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 106
               

               Conread position:
               636-902
               

               Cow position:
               chr3:73820202-73820472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               70, 19
               

               Conread position:
               636-904
               

               Cow position:
               chr3:51578161-51578425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 104
               

               Conread position:
               636-904
               

               Cow position:
               chr3:53046495-53046767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               70, 164
               

               Conread position:
               636-904
               

               Cow position:
               chr3:74079475-74079743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 81
               

               Conread position:
               637-790
               

               Cow position:
               chr3:68624381-68624226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               637-904
               

               Cow position:
               chr3:7566259-7566529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               199, 62
               

               Conread position:
               638-850
               

               Cow position:
               chr3:53083822-53084039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               166
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               638-897
               

               Cow position:
               chr3:56612523-56612263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               117, 21
               

               Conread position:
               638-902
               

               Cow position:
               chr3:70334531-70334797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               75, 214
               

               Conread position:
               638-905
               

               Cow position:
               chr3:15153849-15153583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               199, 69
               

               Conread position:
               639-837
               

               Cow position:
               chr3:70756479-70756679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               77, 102
               

               Conread position:
               639-846
               

               Cow position:
               chr3:15159192-15158984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               639-862
               

               Cow position:
               chr3:67626197-67626406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               169, 35
               

               Conread position:
               639-902
               

               Cow position:
               chr3:11987488-11987226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               67, 76
               

               Conread position:
               640-904
               

               Cow position:
               chr3:68627528-68627791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               60, 131
               

               Conread position:
               643-904
               

               Cow position:
               chr3:60265099-60265345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               644-830
               

               Cow position:
               chr3:35239166-35238982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               42, 48
               

               Conread position:
               653-823
               

               Cow position:
               chr3:19788685-19788854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               653-905
               

               Cow position:
               chr3:44102113-44101866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               137, 85
               

               Conread position:
               660-904
               

               Cow position:
               chr3:74134846-74134595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               27, 20
               

               Conread position:
               662-904
               

               Cow position:
               chr3:6690140-6689897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               50, 79
               

               Conread position:
               663-901
               

               Cow position:
               chr3:32409356-32409109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               664-905
               

               Cow position:
               chr3:70565599-70565843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               31, 55
               

               Conread position:
               666-902
               

               Cow position:
               chr3:19626374-19626612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               40, 82
               

               Conread position:
               669-835
               

               Cow position:
               chr3:82123420-82123584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               156, 22
               

               Conread position:
               671-904
               

               Cow position:
               chr3:73709175-73708943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               40, 54
               

               Conread position:
               676-925
               

               Cow position:
               chr3:79645304-79645566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               34, 181
               

               Conread position:
               681-896
               

               Cow position:
               chr3:73461083-73460867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               25, 34
               

               Conread position:
               681-904
               

               Cow position:
               chr3:59883953-59884176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               155, 33
               

               Conread position:
               683-902
               

               Cow position:
               chr3:67704663-67704440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               686-902
               

               Cow position:
               chr3:35621414-35621200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               20, 29
               

               Conread position:
               687-898
               

               Cow position:
               chr3:20677729-20677933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               26, 98
               

               Conread position:
               689-904
               

               Cow position:
               chr3:81371760-81371541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               690-870
               

               Cow position:
               chr3:74801958-74802139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               169, 24
               

               Conread position:
               690-881
               

               Cow position:
               chr3:4481052-4480858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               30, 127
               

               Conread position:
               690-886
               

               Cow position:
               chr3:15173189-15172991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               690-887
               

               Cow position:
               chr3:74900535-74900726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               690-901
               

               Cow position:
               chr3:26874699-26874491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               170, 114
               

               Conread position:
               690-902
               

               Cow position:
               chr3:59621540-59621749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               16, 30
               

               Conread position:
               690-902
               

               Cow position:
               chr3:84175714-84175928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               690-904
               

               Cow position:
               chr3:17447507-17447713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               690-904
               

               Cow position:
               chr3:70900000-70899790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               21, 41
               

               Conread position:
               690-904
               

               Cow position:
               chr3:80072237-80072022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               170, 25
               

               Conread position:
               690-910
               

               Cow position:
               chr3:10677532-10677749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               31, 17
               

               Conread position:
               691-902
               

               Cow position:
               chr3:13507575-13507362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               156, 17
               

               Conread position:
               691-902
               

               Cow position:
               chr3:55984203-55983992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               167, 16
               

               Conread position:
               691-904
               

               Cow position:
               chr3:56059918-56059703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               692-863
               

               Cow position:
               chr3:21997682-21997851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               692-904
               

               Cow position:
               chr3:54290406-54290620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               693-846
               

               Cow position:
               chr3:38100248-38100094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               693-887
               

               Cow position:
               chr3:15506552-15506358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               151, 22
               

               Conread position:
               696-926
               

               Cow position:
               chr3:35852368-35852601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               698-904
               

               Cow position:
               chr3:83815686-83815894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               14, 64
               

               Conread position:
               699-885
               

               Cow position:
               chr3:18001298-18001115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               700-845
               

               Cow position:
               chr3:41652474-41652330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               705-886
               

               Cow position:
               chr3:2067988-2067806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               141, 170
               

               Conread position:
               705-886
               

               Cow position:
               chr3:22716204-22716388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               47, 11
               

               Conread position:
               705-887
               

               Cow position:
               chr3:53508703-53508530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               705-898
               

               Cow position:
               chr3:55271953-55272145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               157, 9
               

               Conread position:
               705-902
               

               Cow position:
               chr3:46541735-46541930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               705-904
               

               Cow position:
               chr3:26218961-26219156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               708-902
               

               Cow position:
               chr3:61116763-61116959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               124, 8
               

               Conread position:
               708-902
               

               Cow position:
               chr3:74846618-74846812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               127, 144
               

               Conread position:
               708-904
               

               Cow position:
               chr3:48296789-48296605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               710-847
               

               Cow position:
               chr3:51349912-51349775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               710-881
               

               Cow position:
               chr3:3478166-3478338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               21, 76
               

               Conread position:
               710-903
               

               Cow position:
               chr3:62789086-62789283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               710-904
               

               Cow position:
               chr3:116279-116088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 147
               

               Conread position:
               710-904
               

               Cow position:
               chr3:3738570-3738383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               710-904
               

               Cow position:
               chr3:62826530-62826723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               86, 64
               

               Conread position:
               710-904
               

               Cow position:
               chr3:63177571-63177374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               147, 11
               

               Conread position:
               710-904
               

               Cow position:
               chr3:73443007-73443191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               711-828
               

               Cow position:
               chr3:16601530-16601413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               711-887
               

               Cow position:
               chr3:44330349-44330526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               711-903
               

               Cow position:
               chr3:49650476-49650283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               711-904
               

               Cow position:
               chr3:10347443-10347251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               37, 78
               

               Conread position:
               711-904
               

               Cow position:
               chr3:28908115-28908308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               23, 28
               

               Conread position:
               711-904
               

               Cow position:
               chr3:33693907-33693713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               155, 126
               

               Conread position:
               711-904
               

               Cow position:
               chr3:66292088-66292281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               150, 164
               

               Conread position:
               714-902
               

               Cow position:
               chr3:59101912-59101727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               127, 81
               

               Conread position:
               716-900
               

               Cow position:
               chr3:64135801-64135614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               716-904
               

               Cow position:
               chr3:5097290-5097102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               150, 135
               

               Conread position:
               716-904
               

               Cow position:
               chr3:50069846-50069660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               149, 97
               

               Conread position:
               716-904
               

               Cow position:
               chr3:59799331-59799143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               147, 139
               

               Conread position:
               717-865
               

               Cow position:
               chr3:20334089-20333941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               717-904
               

               Cow position:
               chr3:55835739-55835929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               718-904
               

               Cow position:
               chr3:55109532-55109721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               719-898
               

               Cow position:
               chr3:79292908-79292731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               720-904
               

               Cow position:
               chr3:27545740-27545926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               721-904
               

               Cow position:
               chr3:45534218-45534401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               114, 68
               

               Conread position:
               724-899
               

               Cow position:
               chr3:3472115-3471938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               120, 105
               

               Conread position:
               724-904
               

               Cow position:
               chr3:58968828-58969004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               726-904
               

               Cow position:
               chr3:75711379-75711207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               728-902
               

               Cow position:
               chr3:11712036-11711859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               729-887
               

               Cow position:
               chr3:478730-478888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               122, 56
               

               Conread position:
               729-904
               

               Cow position:
               chr3:69750641-69750806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               731-887
               

               Cow position:
               chr3:70614419-70614574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               129, 54
               

               Conread position:
               736-898
               

               Cow position:
               chr3:12670552-12670714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               113, 30
               

               Conread position:
               737-902
               

               Cow position:
               chr3:78896709-78896547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               103, 99
               

               Conread position:
               737-903
               

               Cow position:
               chr3:46108880-46108710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               100, 76
               

               Conread position:
               737-904
               

               Cow position:
               chr3:34675784-34675616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               90, 24
               

               Conread position:
               743-903
               

               Cow position:
               chr3:73759461-73759619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               132, 43
               

               Conread position:
               750-900
               

               Cow position:
               chr3:54030330-54030178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               765-920
               

               Cow position:
               chr3:5850895-5851053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               767-904
               

               Cow position:
               chr3:75907410-75907276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 0
               
Show alignments to all cow chromosomes.
Conread position:	554-863
Cow position:	chr3:75173354-75173643 (view UCSC Genome Browser custom track)
Alignm length:	313
Alignm identity:	214
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	51, 7
Conread position:	590-904
Cow position:	chr3:67744431-67744731 (view UCSC Genome Browser custom track)
Alignm length:	316
Alignm identity:	212
Alignm E-value:	7e-30
Alignm gaps (pig, cow):	39, 66
Conread position:	591-828
Cow position:	chr3:67407160-67407395 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	173
Alignm E-value:	7e-40
Alignm gaps (pig, cow):	9, 0
Conread position:	591-898
Cow position:	chr3:30180293-30179983 (view UCSC Genome Browser custom track)
Alignm length:	314
Alignm identity:	212
Alignm E-value:	4e-35
Alignm gaps (pig, cow):	38, 110
Conread position:	591-902
Cow position:	chr3:2392763-2393065 (view UCSC Genome Browser custom track)
Alignm length:	314
Alignm identity:	217
Alignm E-value:	2e-37
Alignm gaps (pig, cow):	173, 11
Conread position:	593-804
Cow position:	chr3:15859178-15859384 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	146
Alignm E-value:	9e-22
Alignm gaps (pig, cow):	143, 16
Conread position:	594-856
Cow position:	chr3:48810436-48810702 (view UCSC Genome Browser custom track)
Alignm length:	270
Alignm identity:	184
Alignm E-value:	6e-29
Alignm gaps (pig, cow):	86, 7
Conread position:	594-902
Cow position:	chr3:43233709-43233406 (view UCSC Genome Browser custom track)
Alignm length:	312
Alignm identity:	210
Alignm E-value:	9e-32
Alignm gaps (pig, cow):	31, 10
Conread position:	596-880
Cow position:	chr3:76270093-76269816 (view UCSC Genome Browser custom track)
Alignm length:	287
Alignm identity:	210
Alignm E-value:	1.4013e-45
Alignm gaps (pig, cow):	13, 105
Conread position:	598-904
Cow position:	chr3:48253082-48252780 (view UCSC Genome Browser custom track)
Alignm length:	311
Alignm identity:	207
Alignm E-value:	7e-30
Alignm gaps (pig, cow):	33, 89
Conread position:	599-835
Cow position:	chr3:57577897-57577661 (view UCSC Genome Browser custom track)
Alignm length:	239
Alignm identity:	156
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	11, 71
Conread position:	600-902
Cow position:	chr3:10958045-10958345 (view UCSC Genome Browser custom track)
Alignm length:	305
Alignm identity:	232
Alignm E-value:	0
Alignm gaps (pig, cow):	259, 56
Conread position:	601-902
Cow position:	chr3:67519978-67520274 (view UCSC Genome Browser custom track)
Alignm length:	308
Alignm identity:	199
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	195, 110
Conread position:	601-904
Cow position:	chr3:39969663-39969972 (view UCSC Genome Browser custom track)
Alignm length:	311
Alignm identity:	225
Alignm E-value:	0
Alignm gaps (pig, cow):	30, 109
Conread position:	602-777
Cow position:	chr3:16868022-16867845 (view UCSC Genome Browser custom track)
Alignm length:	180
Alignm identity:	129
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	29, 138
Conread position:	602-812
Cow position:	chr3:28902565-28902772 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	147
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	129, 106
Conread position:	602-853
Cow position:	chr3:3947233-3946984 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	185
Alignm E-value:	3e-31
Alignm gaps (pig, cow):	73, 48
Conread position:	602-902
Cow position:	chr3:29813426-29813142 (view UCSC Genome Browser custom track)
Alignm length:	304
Alignm identity:	207
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	16, 87
Conread position:	603-801
Cow position:	chr3:23037312-23037511 (view UCSC Genome Browser custom track)
Alignm length:	202
Alignm identity:	141
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	110, 71
Conread position:	603-810
Cow position:	chr3:26337818-26338031 (view UCSC Genome Browser custom track)
Alignm length:	217
Alignm identity:	154
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	28, 132