Cow genome map
| Conread name: | Ss1.1-rspl23_o6.5 |
| Conread position: | 891-1254 |
| Cow position: | chr10:8996942-8996579 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 899-1191 |
| Cow position: | chr10:9010409-9010117 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 48, 8 |
| Conread position: | 899-1233 |
| Cow position: | chr10:21938997-21938666 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 157, 9 |
| Conread position: | 899-1234 |
| Cow position: | chr10:8996681-8996347 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 899-1239 |
| Cow position: | chr10:9031328-9031667 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 899-1249 |
| Cow position: | chr10:8996429-8996080 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 899-1250 |
| Cow position: | chr10:8996513-8996163 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 9 |
| Conread position: | 899-1254 |
| Cow position: | chr10:9010325-9009971 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 899-1262 |
| Cow position: | chr10:8996849-8996487 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 9 |
| Conread position: | 899-1308 |
| Cow position: | chr10:8996597-8996187 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 9 |
| Conread position: | 901-1234 |
| Cow position: | chr10:9010577-9010243 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 6, 141 |
| Conread position: | 903-1173 |
| Cow position: | chr10:8996257-8995988 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 903-1261 |
| Cow position: | chr10:9010489-9010132 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 50, 8 |
| Conread position: | 905-1308 |
| Cow position: | chr10:8996760-8996355 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 369, 0 |
| Conread position: | 909-1138 |
| Cow position: | chr10:9010064-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 912-1223 |
| Cow position: | chr10:9010145-9009834 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 201, 214 |
| Conread position: | 912-1263 |
| Cow position: | chr10:8996333-8995982 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 915-1254 |
| Cow position: | chr10:9031259-9031598 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 927-1250 |
| Cow position: | chr10:21939222-21938899 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 32 |
| Conread position: | 952-1254 |
| Cow position: | chr10:21939113-21938811 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 234, 252 |
| Conread position: | 968-1248 |
| Cow position: | chr10:9010593-9010313 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 30 |
| Conread position: | 970-1308 |
| Cow position: | chr10:9031230-9031570 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 312, 294 |
Show alignments to all cow chromosomes.