Cow genome map

Conread name: Ss1.1-rspl23_o6.5

Conread position: 872-1185
Cow position:
Alignm length: 315
Alignm identity: 205
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 156, 29

Conread position: 876-1234
Cow position:
Alignm length: 360
Alignm identity: 231
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 24, 18

Conread position: 877-1249
Cow position:
Alignm length: 374
Alignm identity: 235
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 23, 36

Conread position: 884-1254
Cow position:
Alignm length: 375
Alignm identity: 231
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 8, 23

Conread position: 885-1164
Cow position:
Alignm length: 282
Alignm identity: 193
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 12, 19

Conread position: 885-1183
Cow position:
Alignm length: 300
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 130, 20

Conread position: 885-1185
Cow position:
Alignm length: 301
Alignm identity: 206
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 20, 0

Conread position: 885-1185
Cow position:
Alignm length: 301
Alignm identity: 203
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 0

Conread position: 885-1191
Cow position:
Alignm length: 311
Alignm identity: 196
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 146, 19

Conread position: 885-1197
Cow position:
Alignm length: 315
Alignm identity: 210
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 70, 16

Conread position: 885-1234
Cow position:
Alignm length: 352
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 319, 19

Conread position: 885-1254
Cow position:
Alignm length: 373
Alignm identity: 247
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 70, 20

Conread position: 885-1254
Cow position:
Alignm length: 370
Alignm identity: 231
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 885-1257
Cow position:
Alignm length: 375
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 19

Conread position: 885-1280
Cow position:
Alignm length: 397
Alignm identity: 253
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 130, 20

Conread position: 888-1272
Cow position:
Alignm length: 388
Alignm identity: 246
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 81, 17

Conread position: 890-1257
Cow position:
Alignm length: 368
Alignm identity: 241
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 11, 0

Conread position: 893-1191
Cow position:
Alignm length: 300
Alignm identity: 197
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 290, 12

Conread position: 893-1261
Cow position:
Alignm length: 369
Alignm identity: 243
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 11, 0

Conread position: 894-1236
Cow position:
Alignm length: 344
Alignm identity: 229
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 292, 306

Conread position: 894-1250
Cow position:
Alignm length: 359
Alignm identity: 232
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 10, 18

Conread position: 898-1181
Cow position:
Alignm length: 284
Alignm identity: 191
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 10, 0

Conread position: 898-1185
Cow position:
Alignm length: 290
Alignm identity: 200
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 146, 10

Conread position: 898-1214
Cow position:
Alignm length: 318
Alignm identity: 196
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 215, 13

Conread position: 898-1250
Cow position:
Alignm length: 353
Alignm identity: 221
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 898-1250
Cow position:
Alignm length: 353
Alignm identity: 218
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 898-1257
Cow position:
Alignm length: 361
Alignm identity: 239
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 222, 10

Conread position: 898-1257
Cow position:
Alignm length: 364
Alignm identity: 234
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 71, 13

Conread position: 898-1280
Cow position:
Alignm length: 383
Alignm identity: 249
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 10, 0

Conread position: 898-1283
Cow position:
Alignm length: 386
Alignm identity: 239
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 898-1283
Cow position:
Alignm length: 388
Alignm identity: 250
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 48, 13

Conread position: 899-1156
Cow position:
Alignm length: 258
Alignm identity: 179
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 13, 0

Conread position: 899-1191
Cow position:
Alignm length: 294
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 284, 14

Conread position: 899-1191
Cow position:
Alignm length: 294
Alignm identity: 196
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 287, 9

Conread position: 899-1191
Cow position:
Alignm length: 295
Alignm identity: 192
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 142, 13

Conread position: 899-1191
Cow position:
Alignm length: 296
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 145, 12

Conread position: 899-1195
Cow position:
Alignm length: 298
Alignm identity: 196
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 135, 12

Conread position: 899-1225
Cow position:
Alignm length: 327
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 899-1232
Cow position:
Alignm length: 334
Alignm identity: 207
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 899-1232
Cow position:
Alignm length: 334
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1232
Cow position:
Alignm length: 334
Alignm identity: 219
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1243
Cow position:
Alignm length: 345
Alignm identity: 220
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 12, 0

Conread position: 899-1243
Cow position:
Alignm length: 347
Alignm identity: 223
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 215, 13

Conread position: 899-1246
Cow position:
Alignm length: 348
Alignm identity: 217
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 899-1250
Cow position:
Alignm length: 354
Alignm identity: 230
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 205, 13

Conread position: 899-1254
Cow position:
Alignm length: 357
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 9

Conread position: 899-1257
Cow position:
Alignm length: 359
Alignm identity: 237
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1257
Cow position:
Alignm length: 359
Alignm identity: 228
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 0

Conread position: 899-1257
Cow position:
Alignm length: 362
Alignm identity: 243
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 142, 9

Conread position: 899-1257
Cow position:
Alignm length: 360
Alignm identity: 226
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 230, 9

Conread position: 899-1260
Cow position:
Alignm length: 364
Alignm identity: 237
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 205, 9

Conread position: 899-1264
Cow position:
Alignm length: 368
Alignm identity: 245
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 316, 13

Conread position: 899-1283
Cow position:
Alignm length: 388
Alignm identity: 240
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 79, 9

Conread position: 900-1232
Cow position:
Alignm length: 334
Alignm identity: 206
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 232, 11

Conread position: 902-1191
Cow position:
Alignm length: 291
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 274, 9

Conread position: 903-1191
Cow position:
Alignm length: 291
Alignm identity: 195
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 58, 5

Conread position: 903-1204
Cow position:
Alignm length: 303
Alignm identity: 195
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 53, 5

Conread position: 903-1231
Cow position:
Alignm length: 330
Alignm identity: 207
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 205, 10

Conread position: 903-1231
Cow position:
Alignm length: 329
Alignm identity: 220
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1232
Cow position:
Alignm length: 333
Alignm identity: 225
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 210, 9

Conread position: 903-1234
Cow position:
Alignm length: 333
Alignm identity: 217
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 210, 9

Conread position: 903-1234
Cow position:
Alignm length: 333
Alignm identity: 224
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 282, 5

Conread position: 903-1234
Cow position:
Alignm length: 334
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 5

Conread position: 903-1234
Cow position:
Alignm length: 332
Alignm identity: 206
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 903-1243
Cow position:
Alignm length: 341
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1245
Cow position:
Alignm length: 344
Alignm identity: 213
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 210, 9

Conread position: 903-1249
Cow position:
Alignm length: 348
Alignm identity: 224
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 43, 10

Conread position: 903-1250
Cow position:
Alignm length: 351
Alignm identity: 234
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 66, 11

Conread position: 903-1254
Cow position:
Alignm length: 353
Alignm identity: 219
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 330, 8

Conread position: 903-1254
Cow position:
Alignm length: 352
Alignm identity: 234
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1254
Cow position:
Alignm length: 352
Alignm identity: 224
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1254
Cow position:
Alignm length: 352
Alignm identity: 214
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 903-1255
Cow position:
Alignm length: 354
Alignm identity: 237
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 283, 5

Conread position: 903-1257
Cow position:
Alignm length: 356
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 9

Conread position: 903-1257
Cow position:
Alignm length: 355
Alignm identity: 220
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 903-1259
Cow position:
Alignm length: 357
Alignm identity: 231
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 9, 0

Conread position: 903-1261
Cow position:
Alignm length: 361
Alignm identity: 227
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 10

Conread position: 903-1261
Cow position:
Alignm length: 360
Alignm identity: 235
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 283, 5

Conread position: 903-1261
Cow position:
Alignm length: 360
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 283, 5

Conread position: 903-1262
Cow position:
Alignm length: 364
Alignm identity: 243
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 66, 5

Conread position: 903-1262
Cow position:
Alignm length: 361
Alignm identity: 232
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 42, 5

Conread position: 903-1280
Cow position:
Alignm length: 379
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 5

Conread position: 904-1205
Cow position:
Alignm length: 302
Alignm identity: 187
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 904-1232
Cow position:
Alignm length: 333
Alignm identity: 221
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 41, 7

Conread position: 905-1183
Cow position:
Alignm length: 280
Alignm identity: 187
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 64, 71

Conread position: 905-1233
Cow position:
Alignm length: 331
Alignm identity: 226
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 134, 122

Conread position: 905-1234
Cow position:
Alignm length: 331
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 296

Conread position: 905-1261
Cow position:
Alignm length: 358
Alignm identity: 226
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 199, 221

Conread position: 906-1184
Cow position:
Alignm length: 281
Alignm identity: 189
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 48, 31

Conread position: 908-1233
Cow position:
Alignm length: 329
Alignm identity: 223
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 37, 46

Conread position: 908-1307
Cow position:
Alignm length: 407
Alignm identity: 263
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 120, 138

Conread position: 912-1234
Cow position:
Alignm length: 326
Alignm identity: 220
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 245, 290

Conread position: 912-1254
Cow position:
Alignm length: 344
Alignm identity: 229
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 307, 289

Conread position: 912-1261
Cow position:
Alignm length: 352
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 187

Conread position: 913-1282
Cow position:
Alignm length: 371
Alignm identity: 232
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 273, 295

Conread position: 915-1242
Cow position:
Alignm length: 330
Alignm identity: 208
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 199, 213

Conread position: 915-1261
Cow position:
Alignm length: 347
Alignm identity: 219
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 917-1250
Cow position:
Alignm length: 334
Alignm identity: 202
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 917-1278
Cow position:
Alignm length: 363
Alignm identity: 235
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 278, 284

Conread position: 918-1171
Cow position:
Alignm length: 255
Alignm identity: 170
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 52, 61

Conread position: 918-1234
Cow position:
Alignm length: 319
Alignm identity: 204
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 292, 277

Conread position: 918-1236
Cow position:
Alignm length: 320
Alignm identity: 201
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 59

Conread position: 918-1250
Cow position:
Alignm length: 336
Alignm identity: 209
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 57

Conread position: 918-1270
Cow position:
Alignm length: 356
Alignm identity: 223
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 269, 283

Conread position: 920-1257
Cow position:
Alignm length: 340
Alignm identity: 216
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 40

Conread position: 924-1185
Cow position:
Alignm length: 263
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 55

Conread position: 924-1234
Cow position:
Alignm length: 312
Alignm identity: 201
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 189, 203

Conread position: 924-1250
Cow position:
Alignm length: 331
Alignm identity: 205
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 182, 201

Conread position: 924-1257
Cow position:
Alignm length: 334
Alignm identity: 208
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 933-1260
Cow position:
Alignm length: 328
Alignm identity: 205
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 951-1250
Cow position:
Alignm length: 300
Alignm identity: 199
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 966-1152
Cow position:
Alignm length: 187
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 172, 0

Conread position: 969-1149
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 971-1234
Cow position:
Alignm length: 265
Alignm identity: 170
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 228, 100

Conread position: 971-1254
Cow position:
Alignm length: 285
Alignm identity: 189
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 114, 96

Conread position: 971-1282
Cow position:
Alignm length: 314
Alignm identity: 210
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 154, 149

Conread position: 978-1191
Cow position:
Alignm length: 215
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 207, 0

Conread position: 978-1191
Cow position:
Alignm length: 215
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 207, 0

Conread position: 978-1238
Cow position:
Alignm length: 261
Alignm identity: 169
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 982-1249
Cow position:
Alignm length: 269
Alignm identity: 175
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 203, 227

Conread position: 987-1236
Cow position:
Alignm length: 250
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1050-1281
Cow position:
Alignm length: 234
Alignm identity: 156
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 163, 152

Show alignments to all cow chromosomes.