Cow genome map

Conread name: Ss1.1-rspl23_o6.5

Conread position: 322-583
Cow position:
Alignm length: 263
Alignm identity: 186
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 64, 69

Conread position: 328-559
Cow position:
Alignm length: 232
Alignm identity: 151
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 885-1254
Cow position:
Alignm length: 370
Alignm identity: 236
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 0

Conread position: 886-1249
Cow position:
Alignm length: 366
Alignm identity: 239
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 13, 23

Conread position: 893-1243
Cow position:
Alignm length: 351
Alignm identity: 232
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 893-1254
Cow position:
Alignm length: 364
Alignm identity: 233
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 145, 12

Conread position: 894-1191
Cow position:
Alignm length: 300
Alignm identity: 203
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 218, 17

Conread position: 894-1191
Cow position:
Alignm length: 300
Alignm identity: 195
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 15

Conread position: 898-1262
Cow position:
Alignm length: 365
Alignm identity: 235
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 15, 0

Conread position: 899-1085
Cow position:
Alignm length: 188
Alignm identity: 129
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 116, 9

Conread position: 899-1148
Cow position:
Alignm length: 250
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 899-1160
Cow position:
Alignm length: 262
Alignm identity: 165
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1161
Cow position:
Alignm length: 263
Alignm identity: 186
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1174
Cow position:
Alignm length: 276
Alignm identity: 195
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1177
Cow position:
Alignm length: 280
Alignm identity: 183
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 9

Conread position: 899-1185
Cow position:
Alignm length: 287
Alignm identity: 184
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1185
Cow position:
Alignm length: 288
Alignm identity: 195
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 129, 13

Conread position: 899-1191
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 241, 13

Conread position: 899-1192
Cow position:
Alignm length: 295
Alignm identity: 206
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 287, 9

Conread position: 899-1225
Cow position:
Alignm length: 327
Alignm identity: 211
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1231
Cow position:
Alignm length: 336
Alignm identity: 226
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 138, 9

Conread position: 899-1232
Cow position:
Alignm length: 334
Alignm identity: 223
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 12, 0

Conread position: 899-1234
Cow position:
Alignm length: 337
Alignm identity: 223
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 208, 13

Conread position: 899-1234
Cow position:
Alignm length: 337
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 12

Conread position: 899-1243
Cow position:
Alignm length: 346
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 12

Conread position: 899-1243
Cow position:
Alignm length: 345
Alignm identity: 223
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1243
Cow position:
Alignm length: 346
Alignm identity: 229
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 287, 13

Conread position: 899-1245
Cow position:
Alignm length: 350
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 9

Conread position: 899-1246
Cow position:
Alignm length: 349
Alignm identity: 230
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 287, 9

Conread position: 899-1246
Cow position:
Alignm length: 349
Alignm identity: 229
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 50

Conread position: 899-1248
Cow position:
Alignm length: 352
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 13

Conread position: 899-1250
Cow position:
Alignm length: 353
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 8

Conread position: 899-1250
Cow position:
Alignm length: 353
Alignm identity: 234
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 283, 9

Conread position: 899-1250
Cow position:
Alignm length: 352
Alignm identity: 218
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 899-1254
Cow position:
Alignm length: 356
Alignm identity: 224
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 11, 0

Conread position: 899-1254
Cow position:
Alignm length: 358
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 13

Conread position: 899-1254
Cow position:
Alignm length: 356
Alignm identity: 230
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1254
Cow position:
Alignm length: 356
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 899-1254
Cow position:
Alignm length: 356
Alignm identity: 234
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 11, 0

Conread position: 899-1262
Cow position:
Alignm length: 365
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 8

Conread position: 899-1262
Cow position:
Alignm length: 365
Alignm identity: 242
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 214, 13

Conread position: 899-1262
Cow position:
Alignm length: 367
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 12

Conread position: 899-1262
Cow position:
Alignm length: 366
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 9

Conread position: 899-1262
Cow position:
Alignm length: 365
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 9

Conread position: 899-1270
Cow position:
Alignm length: 374
Alignm identity: 242
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 298, 9

Conread position: 899-1270
Cow position:
Alignm length: 373
Alignm identity: 238
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 363, 12

Conread position: 899-1305
Cow position:
Alignm length: 408
Alignm identity: 255
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 386, 324

Conread position: 899-1306
Cow position:
Alignm length: 412
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 9

Conread position: 899-1307
Cow position:
Alignm length: 414
Alignm identity: 263
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 133, 9

Conread position: 899-1308
Cow position:
Alignm length: 412
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 365, 9

Conread position: 900-1249
Cow position:
Alignm length: 351
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 303

Conread position: 900-1261
Cow position:
Alignm length: 362
Alignm identity: 221
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 900-1262
Cow position:
Alignm length: 364
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 0

Conread position: 901-1243
Cow position:
Alignm length: 343
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 901-1261
Cow position:
Alignm length: 362
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 902-1234
Cow position:
Alignm length: 335
Alignm identity: 226
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 12, 120

Conread position: 902-1254
Cow position:
Alignm length: 354
Alignm identity: 230
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 41, 70

Conread position: 903-1185
Cow position:
Alignm length: 284
Alignm identity: 189
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 136, 5

Conread position: 903-1234
Cow position:
Alignm length: 332
Alignm identity: 213
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 903-1245
Cow position:
Alignm length: 344
Alignm identity: 230
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 215, 8

Conread position: 903-1245
Cow position:
Alignm length: 346
Alignm identity: 215
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 147, 127

Conread position: 903-1248
Cow position:
Alignm length: 346
Alignm identity: 231
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1248
Cow position:
Alignm length: 347
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 5

Conread position: 903-1249
Cow position:
Alignm length: 347
Alignm identity: 222
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1250
Cow position:
Alignm length: 348
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1254
Cow position:
Alignm length: 352
Alignm identity: 215
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1254
Cow position:
Alignm length: 352
Alignm identity: 218
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1262
Cow position:
Alignm length: 361
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 5

Conread position: 903-1262
Cow position:
Alignm length: 360
Alignm identity: 233
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1280
Cow position:
Alignm length: 378
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 0

Conread position: 903-1307
Cow position:
Alignm length: 408
Alignm identity: 260
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 292, 5

Conread position: 904-1308
Cow position:
Alignm length: 408
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 7

Conread position: 905-1167
Cow position:
Alignm length: 263
Alignm identity: 181
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 905-1243
Cow position:
Alignm length: 339
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 905-1248
Cow position:
Alignm length: 345
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 295

Conread position: 905-1250
Cow position:
Alignm length: 349
Alignm identity: 233
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 208, 222

Conread position: 905-1254
Cow position:
Alignm length: 350
Alignm identity: 229
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 317, 0

Conread position: 905-1254
Cow position:
Alignm length: 351
Alignm identity: 229
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 281, 299

Conread position: 905-1261
Cow position:
Alignm length: 357
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 905-1293
Cow position:
Alignm length: 391
Alignm identity: 258
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 282, 301

Conread position: 908-1260
Cow position:
Alignm length: 355
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 277, 301

Conread position: 911-1160
Cow position:
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 200, 190

Conread position: 914-1229
Cow position:
Alignm length: 316
Alignm identity: 214
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 93, 0

Conread position: 932-1231
Cow position:
Alignm length: 303
Alignm identity: 192
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 32, 23

Conread position: 965-1261
Cow position:
Alignm length: 298
Alignm identity: 190
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 154, 148

Conread position: 966-1262
Cow position:
Alignm length: 298
Alignm identity: 195
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 140, 84

Conread position: 971-1262
Cow position:
Alignm length: 292
Alignm identity: 198
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 972-1308
Cow position:
Alignm length: 340
Alignm identity: 216
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 291, 133

Conread position: 984-1243
Cow position:
Alignm length: 261
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 204, 216

Conread position: 1007-1272
Cow position:
Alignm length: 266
Alignm identity: 168
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 61, 0

Show alignments to all cow chromosomes.