Cow genome map

Conread name: Ss1.1-rspl23_o6.5

Conread position: 322-583
Cow position: chr19:14951292-14951031 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 64, 69

Conread position: 328-559
Cow position: chr19:23640001-23640232 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 151
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 885-1254
Cow position: chr19:23596935-23597299 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 236
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 0

Conread position: 886-1249
Cow position: chr19:23649624-23649987 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 239
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 13, 23

Conread position: 893-1243
Cow position: chr19:43570145-43569797 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 232
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 893-1254
Cow position: chr19:20678030-20678389 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 233
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 145, 12

Conread position: 894-1191
Cow position: chr19:14948470-14948175 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 203
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 218, 17

Conread position: 894-1191
Cow position: chr19:20678113-20678411 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 195
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 15

Conread position: 898-1262
Cow position: chr19:14939987-14940350 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 235
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 15, 0

Conread position: 899-1085
Cow position: chr19:23597533-23597718 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 116, 9

Conread position: 899-1148
Cow position: chr19:14940828-14941076 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 899-1160
Cow position: chr19:23650226-23650486 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 165
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1161
Cow position: chr19:14959569-14959308 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1174
Cow position: chr19:14959973-14959704 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1177
Cow position: chr19:20635297-20635020 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 183
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 9

Conread position: 899-1185
Cow position: chr19:14948299-14948014 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 184
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1185
Cow position: chr19:20677699-20677984 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 129, 13

Conread position: 899-1191
Cow position: chr19:20677783-20678075 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 241, 13

Conread position: 899-1192
Cow position: chr19:20678371-20678664 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 287, 9

Conread position: 899-1225
Cow position: chr19:14940744-14941069 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 211
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1231
Cow position: chr19:23649806-23650137 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 226
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 138, 9

Conread position: 899-1232
Cow position: chr19:14948383-14948051 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 12, 0

Conread position: 899-1234
Cow position: chr19:14960057-14959725 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 223
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 208, 13

Conread position: 899-1234
Cow position: chr19:23613936-23614270 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 12

Conread position: 899-1243
Cow position: chr19:14940156-14940499 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 12

Conread position: 899-1243
Cow position: chr19:20635549-20635206 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 223
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1243
Cow position: chr19:20635633-20635290 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 229
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 287, 13

Conread position: 899-1245
Cow position: chr19:23614356-23614701 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 9

Conread position: 899-1246
Cow position: chr19:14959158-14958818 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 287, 9

Conread position: 899-1246
Cow position: chr19:14959654-14959307 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 50

Conread position: 899-1248
Cow position: chr19:20678203-20678551 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 13

Conread position: 899-1250
Cow position: chr19:23597113-23597463 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 8

Conread position: 899-1250
Cow position: chr19:23597281-23597631 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 234
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 283, 9

Conread position: 899-1250
Cow position: chr19:23649302-23649652 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 218
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 899-1254
Cow position: chr19:20677615-20677969 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 224
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 11, 0

Conread position: 899-1254
Cow position: chr19:20678287-20678641 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 13

Conread position: 899-1254
Cow position: chr19:23649470-23649824 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 230
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1254
Cow position: chr19:23649554-23649908 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 899-1254
Cow position: chr19:23649890-23650244 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 234
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 11, 0

Conread position: 899-1262
Cow position: chr19:14940240-14940602 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 8

Conread position: 899-1262
Cow position: chr19:14940576-14940938 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 242
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 214, 13

Conread position: 899-1262
Cow position: chr19:23613684-23614046 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 12

Conread position: 899-1262
Cow position: chr19:23613768-23614130 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 9

Conread position: 899-1262
Cow position: chr19:23614776-23615136 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 9

Conread position: 899-1270
Cow position: chr19:23614188-23614559 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 242
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 298, 9

Conread position: 899-1270
Cow position: chr19:23649974-23650345 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 238
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 363, 12

Conread position: 899-1305
Cow position: chr19:43570057-43569653 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 255
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 386, 324

Conread position: 899-1306
Cow position: chr19:14940072-14940480 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 9

Conread position: 899-1307
Cow position: chr19:23614608-23615017 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 263
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 133, 9

Conread position: 899-1308
Cow position: chr19:14960307-14959899 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 365, 9

Conread position: 900-1249
Cow position: chr19:14940408-14940757 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 303

Conread position: 900-1261
Cow position: chr19:20635715-20635356 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 221
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 900-1262
Cow position: chr19:23613347-23613710 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 0

Conread position: 901-1243
Cow position: chr19:14960221-14959882 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 901-1261
Cow position: chr19:23613432-23613793 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 902-1234
Cow position: chr19:14959241-14958914 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 226
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 12, 120

Conread position: 902-1254
Cow position: chr19:43570463-43570122 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 230
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 41, 70

Conread position: 903-1185
Cow position: chr19:20678459-20678737 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 136, 5

Conread position: 903-1234
Cow position: chr19:23649390-23649720 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 213
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 903-1245
Cow position: chr19:14940664-14941005 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 215, 8

Conread position: 903-1245
Cow position: chr19:20677450-20677792 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 215
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 147, 127

Conread position: 903-1248
Cow position: chr19:20635377-20635033 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 231
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1248
Cow position: chr19:23613604-23613948 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 5

Conread position: 903-1249
Cow position: chr19:23650062-23650407 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 222
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1250
Cow position: chr19:14940328-14940674 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1254
Cow position: chr19:20677535-20677885 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 215
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1254
Cow position: chr19:20677955-20678305 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 218
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1262
Cow position: chr19:23613856-23614214 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 5

Conread position: 903-1262
Cow position: chr19:43570220-43569862 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 233
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1280
Cow position: chr19:23614696-23615071 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 0

Conread position: 903-1307
Cow position: chr19:23614276-23614681 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 260
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 292, 5

Conread position: 904-1308
Cow position: chr19:23597202-23597607 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 7

Conread position: 905-1167
Cow position: chr19:23650147-23650409 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 905-1243
Cow position: chr19:14940497-14940835 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 905-1248
Cow position: chr19:23597370-23597713 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 295

Conread position: 905-1250
Cow position: chr19:23614529-23614874 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 233
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 208, 222

Conread position: 905-1254
Cow position: chr19:14960470-14960123 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 229
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 317, 0

Conread position: 905-1254
Cow position: chr19:23613521-23613870 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 229
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 281, 299

Conread position: 905-1261
Cow position: chr19:23614025-23614381 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 905-1293
Cow position: chr19:23614109-23614495 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 258
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 282, 301

Conread position: 908-1260
Cow position: chr19:23614448-23614800 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 277, 301

Conread position: 911-1160
Cow position: chr19:14960130-14959881 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 200, 190

Conread position: 914-1229
Cow position: chr19:43570368-43570063 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 93, 0

Conread position: 932-1231
Cow position: chr19:23596812-23597108 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 192
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 32, 23

Conread position: 965-1261
Cow position: chr19:23649283-23649579 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 190
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 154, 148

Conread position: 966-1262
Cow position: chr19:14948484-14948189 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 195
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 140, 84

Conread position: 971-1262
Cow position: chr19:43570237-43569946 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 972-1308
Cow position: chr19:14959254-14958922 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 216
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 291, 133

Conread position: 984-1243
Cow position: chr19:14960475-14960216 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 204, 216

Conread position: 1007-1272
Cow position: chr19:14959712-14959449 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 168
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 61, 0

Show alignments to all cow chromosomes.