Cow genome map
| Conread name: | Ss1.1-rspl23_o6.5 |
| Conread position: | 872-1249 |
| Cow position: | chr2:78754804-78755179 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 241, 29 |
| Conread position: | 885-1245 |
| Cow position: | chr2:86465335-86465693 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 221, 19 |
| Conread position: | 886-1308 |
| Cow position: | chr2:82800016-82800438 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 378, 19 |
| Conread position: | 887-1264 |
| Cow position: | chr2:82799933-82800307 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 893-1234 |
| Cow position: | chr2:82800107-82800446 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 121, 12 |
| Conread position: | 893-1296 |
| Cow position: | chr2:78754993-78755395 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 269 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 131, 11 |
| Conread position: | 894-1248 |
| Cow position: | chr2:78754170-78754522 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 66, 81 |
| Conread position: | 899-1221 |
| Cow position: | chr2:48689376-48689055 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 135, 12 |
| Conread position: | 899-1249 |
| Cow position: | chr2:78754914-78755263 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 116, 9 |
| Conread position: | 899-1249 |
| Cow position: | chr2:78755250-78755597 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 237 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 128, 9 |
| Conread position: | 899-1262 |
| Cow position: | chr2:82799692-82800054 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 899-1271 |
| Cow position: | chr2:78755666-78756038 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 217, 14 |
| Conread position: | 899-1279 |
| Cow position: | chr2:78755417-78755792 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 250 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 70, 13 |
| Conread position: | 900-1161 |
| Cow position: | chr2:78756088-78756346 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 900-1273 |
| Cow position: | chr2:48689544-48689170 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 61 |
| Conread position: | 902-1113 |
| Cow position: | chr2:86465939-86466149 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 132, 7 |
| Conread position: | 902-1249 |
| Cow position: | chr2:78754261-78754607 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 8, 182 |
| Conread position: | 903-1185 |
| Cow position: | chr2:78754429-78754710 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 43, 55 |
| Conread position: | 903-1249 |
| Cow position: | chr2:82799864-82800209 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 229 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 903-1249 |
| Cow position: | chr2:86465184-86465529 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 150, 8 |
| Conread position: | 906-1185 |
| Cow position: | chr2:82799530-82799809 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 109, 128 |
| Conread position: | 906-1261 |
| Cow position: | chr2:82799614-82799969 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 913-1192 |
| Cow position: | chr2:82799453-82799732 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 971-1279 |
| Cow position: | chr2:78754817-78755124 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 303, 0 |
| Conread position: | 985-1270 |
| Cow position: | chr2:78756088-78756371 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 26 |
| Conread position: | 1001-1254 |
| Cow position: | chr2:82799457-82799710 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1029-1306 |
| Cow position: | chr2:82799401-82799680 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 31, 24 |
Show alignments to all cow chromosomes.