Cow genome map

Conread name: Ss1.1-rspl23_o6.5

Conread position: 317-580
Cow position:
Alignm length: 264
Alignm identity: 182
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 318-569
Cow position:
Alignm length: 252
Alignm identity: 175
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 332-583
Cow position:
Alignm length: 252
Alignm identity: 173
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 885-1249
Cow position:
Alignm length: 371
Alignm identity: 243
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 59, 20

Conread position: 885-1254
Cow position:
Alignm length: 371
Alignm identity: 244
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 300, 20

Conread position: 886-1254
Cow position:
Alignm length: 372
Alignm identity: 243
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 27, 15

Conread position: 893-1163
Cow position:
Alignm length: 273
Alignm identity: 192
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 139, 12

Conread position: 893-1191
Cow position:
Alignm length: 303
Alignm identity: 206
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 135, 13

Conread position: 893-1234
Cow position:
Alignm length: 343
Alignm identity: 232
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 136, 18

Conread position: 893-1261
Cow position:
Alignm length: 369
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 893-1277
Cow position:
Alignm length: 386
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 12

Conread position: 894-1307
Cow position:
Alignm length: 419
Alignm identity: 275
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 18

Conread position: 896-1226
Cow position:
Alignm length: 332
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 16

Conread position: 897-1234
Cow position:
Alignm length: 339
Alignm identity: 229
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 210, 11

Conread position: 897-1254
Cow position:
Alignm length: 359
Alignm identity: 234
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 210, 15

Conread position: 897-1257
Cow position:
Alignm length: 364
Alignm identity: 245
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 288, 8

Conread position: 898-1169
Cow position:
Alignm length: 274
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 134, 11

Conread position: 898-1191
Cow position:
Alignm length: 298
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 69, 13

Conread position: 898-1193
Cow position:
Alignm length: 299
Alignm identity: 193
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 13

Conread position: 898-1271
Cow position:
Alignm length: 375
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 365, 10

Conread position: 898-1307
Cow position:
Alignm length: 416
Alignm identity: 273
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 130, 13

Conread position: 899-1172
Cow position:
Alignm length: 274
Alignm identity: 174
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 899-1185
Cow position:
Alignm length: 288
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 158, 9

Conread position: 899-1185
Cow position:
Alignm length: 288
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 230, 12

Conread position: 899-1191
Cow position:
Alignm length: 298
Alignm identity: 193
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 13

Conread position: 899-1231
Cow position:
Alignm length: 334
Alignm identity: 221
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 287, 12

Conread position: 899-1242
Cow position:
Alignm length: 348
Alignm identity: 233
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 124, 10

Conread position: 899-1243
Cow position:
Alignm length: 348
Alignm identity: 227
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 33, 9

Conread position: 899-1244
Cow position:
Alignm length: 347
Alignm identity: 223
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 242, 12

Conread position: 899-1249
Cow position:
Alignm length: 351
Alignm identity: 214
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 899-1250
Cow position:
Alignm length: 353
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 9

Conread position: 899-1254
Cow position:
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 9

Conread position: 899-1254
Cow position:
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 9

Conread position: 899-1254
Cow position:
Alignm length: 358
Alignm identity: 238
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 158, 9

Conread position: 899-1254
Cow position:
Alignm length: 363
Alignm identity: 230
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 9

Conread position: 899-1254
Cow position:
Alignm length: 359
Alignm identity: 231
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 9

Conread position: 899-1254
Cow position:
Alignm length: 358
Alignm identity: 225
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 283, 9

Conread position: 899-1257
Cow position:
Alignm length: 360
Alignm identity: 233
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 293, 9

Conread position: 899-1261
Cow position:
Alignm length: 365
Alignm identity: 239
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 285, 9

Conread position: 899-1261
Cow position:
Alignm length: 363
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1261
Cow position:
Alignm length: 365
Alignm identity: 237
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 230, 12

Conread position: 899-1261
Cow position:
Alignm length: 364
Alignm identity: 240
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 287, 13

Conread position: 899-1262
Cow position:
Alignm length: 365
Alignm identity: 235
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 283, 9

Conread position: 899-1307
Cow position:
Alignm length: 411
Alignm identity: 261
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 364, 10

Conread position: 899-1308
Cow position:
Alignm length: 412
Alignm identity: 266
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 364, 9

Conread position: 900-1160
Cow position:
Alignm length: 261
Alignm identity: 178
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 8, 0

Conread position: 900-1257
Cow position:
Alignm length: 358
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 0

Conread position: 901-1250
Cow position:
Alignm length: 351
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 6

Conread position: 901-1261
Cow position:
Alignm length: 363
Alignm identity: 241
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 214, 13

Conread position: 903-1104
Cow position:
Alignm length: 202
Alignm identity: 135
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1159
Cow position:
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 129, 6

Conread position: 903-1192
Cow position:
Alignm length: 291
Alignm identity: 196
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 212, 5

Conread position: 903-1233
Cow position:
Alignm length: 336
Alignm identity: 236
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 56, 9

Conread position: 903-1234
Cow position:
Alignm length: 335
Alignm identity: 225
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 69, 5

Conread position: 903-1234
Cow position:
Alignm length: 333
Alignm identity: 227
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 283, 9

Conread position: 903-1234
Cow position:
Alignm length: 332
Alignm identity: 216
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 9, 0

Conread position: 903-1243
Cow position:
Alignm length: 343
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 66, 9

Conread position: 903-1243
Cow position:
Alignm length: 343
Alignm identity: 225
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 66, 5

Conread position: 903-1245
Cow position:
Alignm length: 345
Alignm identity: 226
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 8

Conread position: 903-1249
Cow position:
Alignm length: 348
Alignm identity: 216
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 209, 9

Conread position: 903-1250
Cow position:
Alignm length: 348
Alignm identity: 231
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1254
Cow position:
Alignm length: 356
Alignm identity: 226
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 154, 8

Conread position: 903-1261
Cow position:
Alignm length: 362
Alignm identity: 234
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 122, 8

Conread position: 903-1261
Cow position:
Alignm length: 359
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1262
Cow position:
Alignm length: 364
Alignm identity: 239
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 11, 51

Conread position: 903-1262
Cow position:
Alignm length: 361
Alignm identity: 235
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 297, 5

Conread position: 903-1279
Cow position:
Alignm length: 379
Alignm identity: 253
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 125, 8

Conread position: 903-1283
Cow position:
Alignm length: 384
Alignm identity: 254
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 120, 9

Conread position: 903-1308
Cow position:
Alignm length: 410
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 5

Conread position: 903-1308
Cow position:
Alignm length: 412
Alignm identity: 267
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 66, 8

Conread position: 903-1308
Cow position:
Alignm length: 409
Alignm identity: 264
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 379, 11

Conread position: 905-1164
Cow position:
Alignm length: 260
Alignm identity: 180
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 905-1179
Cow position:
Alignm length: 276
Alignm identity: 191
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 123, 135

Conread position: 905-1233
Cow position:
Alignm length: 331
Alignm identity: 224
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 298, 290

Conread position: 905-1234
Cow position:
Alignm length: 330
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 905-1243
Cow position:
Alignm length: 342
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 220

Conread position: 905-1245
Cow position:
Alignm length: 341
Alignm identity: 224
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 905-1254
Cow position:
Alignm length: 350
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 905-1261
Cow position:
Alignm length: 358
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 298

Conread position: 905-1261
Cow position:
Alignm length: 357
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 905-1270
Cow position:
Alignm length: 368
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 291

Conread position: 905-1279
Cow position:
Alignm length: 376
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 48

Conread position: 905-1283
Cow position:
Alignm length: 381
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 290

Conread position: 905-1306
Cow position:
Alignm length: 407
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 298

Conread position: 906-1244
Cow position:
Alignm length: 341
Alignm identity: 220
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 126, 136

Conread position: 906-1271
Cow position:
Alignm length: 371
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 334, 0

Conread position: 907-1249
Cow position:
Alignm length: 345
Alignm identity: 230
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 144, 131

Conread position: 911-1194
Cow position:
Alignm length: 285
Alignm identity: 191
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 274, 0

Conread position: 911-1248
Cow position:
Alignm length: 338
Alignm identity: 226
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 912-1234
Cow position:
Alignm length: 324
Alignm identity: 210
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 78, 71

Conread position: 912-1248
Cow position:
Alignm length: 337
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 913-1183
Cow position:
Alignm length: 271
Alignm identity: 188
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 913-1183
Cow position:
Alignm length: 274
Alignm identity: 187
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 121, 138

Conread position: 915-1308
Cow position:
Alignm length: 398
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 69

Conread position: 916-1254
Cow position:
Alignm length: 340
Alignm identity: 215
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 225, 221

Conread position: 916-1308
Cow position:
Alignm length: 400
Alignm identity: 264
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 241, 281

Conread position: 918-1250
Cow position:
Alignm length: 334
Alignm identity: 215
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 268, 282

Conread position: 924-1254
Cow position:
Alignm length: 333
Alignm identity: 226
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 56, 50

Conread position: 927-1191
Cow position:
Alignm length: 266
Alignm identity: 173
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 255, 0

Conread position: 929-1254
Cow position:
Alignm length: 327
Alignm identity: 201
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 256, 271

Conread position: 936-1270
Cow position:
Alignm length: 339
Alignm identity: 212
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 48

Conread position: 962-1191
Cow position:
Alignm length: 231
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 224, 0

Conread position: 963-1262
Cow position:
Alignm length: 303
Alignm identity: 203
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 6, 11

Conread position: 964-1272
Cow position:
Alignm length: 312
Alignm identity: 204
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 5, 10

Conread position: 965-1193
Cow position:
Alignm length: 231
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 151, 167

Conread position: 971-1231
Cow position:
Alignm length: 262
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 226, 233

Conread position: 984-1308
Cow position:
Alignm length: 330
Alignm identity: 217
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 202, 217

Conread position: 989-1250
Cow position:
Alignm length: 264
Alignm identity: 168
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 121, 129

Conread position: 989-1254
Cow position:
Alignm length: 268
Alignm identity: 172
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 121, 129

Show alignments to all cow chromosomes.