Cow genome map

Conread name: Ss1.1-rspl23_o6.5

Conread position: 49-595
Cow position:
Alignm length: 555
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 272-595
Cow position:
Alignm length: 324
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 281-582
Cow position:
Alignm length: 307
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 36

Conread position: 296-595
Cow position:
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 311-581
Cow position:
Alignm length: 271
Alignm identity: 177
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 316-571
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 316-572
Cow position:
Alignm length: 263
Alignm identity: 181
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 19, 132

Conread position: 317-577
Cow position:
Alignm length: 261
Alignm identity: 184
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 317-595
Cow position:
Alignm length: 279
Alignm identity: 195
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 318-578
Cow position:
Alignm length: 261
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 318-579
Cow position:
Alignm length: 263
Alignm identity: 180
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 183, 187

Conread position: 591-734
Cow position:
Alignm length: 144
Alignm identity: 125
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 732-1308
Cow position:
Alignm length: 578
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 530, 0

Conread position: 828-1250
Cow position:
Alignm length: 430
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 387

Conread position: 877-1161
Cow position:
Alignm length: 286
Alignm identity: 181
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 23, 9

Conread position: 877-1233
Cow position:
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 21

Conread position: 885-1160
Cow position:
Alignm length: 276
Alignm identity: 197
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 19, 0

Conread position: 885-1227
Cow position:
Alignm length: 343
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 893-1234
Cow position:
Alignm length: 343
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 12

Conread position: 893-1261
Cow position:
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 899-1135
Cow position:
Alignm length: 238
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 160, 9

Conread position: 899-1148
Cow position:
Alignm length: 250
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 899-1225
Cow position:
Alignm length: 329
Alignm identity: 216
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 166, 12

Conread position: 899-1231
Cow position:
Alignm length: 333
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 899-1236
Cow position:
Alignm length: 338
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 899-1243
Cow position:
Alignm length: 346
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 283, 8

Conread position: 899-1250
Cow position:
Alignm length: 353
Alignm identity: 235
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 71, 9

Conread position: 899-1250
Cow position:
Alignm length: 355
Alignm identity: 240
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 84, 8

Conread position: 899-1254
Cow position:
Alignm length: 356
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 899-1254
Cow position:
Alignm length: 356
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 899-1261
Cow position:
Alignm length: 363
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1261
Cow position:
Alignm length: 364
Alignm identity: 240
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 284, 9

Conread position: 899-1262
Cow position:
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 8

Conread position: 899-1262
Cow position:
Alignm length: 365
Alignm identity: 226
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 214, 9

Conread position: 899-1273
Cow position:
Alignm length: 379
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 13

Conread position: 899-1307
Cow position:
Alignm length: 412
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 9

Conread position: 899-1308
Cow position:
Alignm length: 412
Alignm identity: 264
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 286, 9

Conread position: 900-1262
Cow position:
Alignm length: 363
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 900-1308
Cow position:
Alignm length: 412
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 381, 362

Conread position: 901-1191
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 9, 0

Conread position: 901-1257
Cow position:
Alignm length: 357
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 901-1283
Cow position:
Alignm length: 384
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 52

Conread position: 901-1307
Cow position:
Alignm length: 411
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 13

Conread position: 901-1308
Cow position:
Alignm length: 412
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 362

Conread position: 902-1308
Cow position:
Alignm length: 412
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 361

Conread position: 903-1170
Cow position:
Alignm length: 268
Alignm identity: 185
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 9, 0

Conread position: 903-1183
Cow position:
Alignm length: 283
Alignm identity: 180
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 47

Conread position: 903-1231
Cow position:
Alignm length: 329
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1231
Cow position:
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 8

Conread position: 903-1231
Cow position:
Alignm length: 330
Alignm identity: 222
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 282, 5

Conread position: 903-1243
Cow position:
Alignm length: 343
Alignm identity: 223
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 226, 9

Conread position: 903-1260
Cow position:
Alignm length: 358
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1261
Cow position:
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 10

Conread position: 903-1280
Cow position:
Alignm length: 379
Alignm identity: 247
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 66, 9

Conread position: 903-1308
Cow position:
Alignm length: 409
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 5

Conread position: 903-1308
Cow position:
Alignm length: 408
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 9

Conread position: 903-1308
Cow position:
Alignm length: 409
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 5

Conread position: 905-1261
Cow position:
Alignm length: 357
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 906-1148
Cow position:
Alignm length: 243
Alignm identity: 161
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 906-1177
Cow position:
Alignm length: 272
Alignm identity: 185
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 245, 0

Conread position: 906-1249
Cow position:
Alignm length: 344
Alignm identity: 227
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 911-1226
Cow position:
Alignm length: 320
Alignm identity: 204
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 72, 87

Conread position: 912-1231
Cow position:
Alignm length: 321
Alignm identity: 208
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 194, 240

Conread position: 912-1243
Cow position:
Alignm length: 332
Alignm identity: 204
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 912-1307
Cow position:
Alignm length: 401
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 206

Conread position: 913-1308
Cow position:
Alignm length: 400
Alignm identity: 261
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 113, 121

Conread position: 914-1283
Cow position:
Alignm length: 373
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 288

Conread position: 916-1278
Cow position:
Alignm length: 364
Alignm identity: 240
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 110, 119

Conread position: 952-1262
Cow position:
Alignm length: 312
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 18

Conread position: 963-1257
Cow position:
Alignm length: 296
Alignm identity: 200
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 144, 135

Conread position: 970-1245
Cow position:
Alignm length: 276
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 971-1261
Cow position:
Alignm length: 291
Alignm identity: 193
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 987-1307
Cow position:
Alignm length: 326
Alignm identity: 211
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 164, 170

Conread position: 993-1308
Cow position:
Alignm length: 317
Alignm identity: 197
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 189, 243

Conread position: 1002-1231
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 32

Show alignments to all cow chromosomes.