Cow genome map

Conread name: Ss1.1-rspl23_o6.5

Conread position: 237-595
Cow position:
Alignm length: 360
Alignm identity: 235
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 84, 37

Conread position: 317-595
Cow position:
Alignm length: 279
Alignm identity: 196
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 318-560
Cow position:
Alignm length: 244
Alignm identity: 158
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 199, 186

Conread position: 318-573
Cow position:
Alignm length: 256
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 320-573
Cow position:
Alignm length: 255
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 248, 8

Conread position: 322-566
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 330-545
Cow position:
Alignm length: 217
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 187, 165

Conread position: 330-567
Cow position:
Alignm length: 239
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 187, 181

Conread position: 332-576
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 94, 98

Conread position: 333-586
Cow position:
Alignm length: 255
Alignm identity: 168
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 247, 0

Conread position: 335-595
Cow position:
Alignm length: 261
Alignm identity: 177
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 856-1232
Cow position:
Alignm length: 383
Alignm identity: 247
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 51, 5

Conread position: 877-1308
Cow position:
Alignm length: 437
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 878-1204
Cow position:
Alignm length: 331
Alignm identity: 214
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 22, 34

Conread position: 885-1231
Cow position:
Alignm length: 348
Alignm identity: 220
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 221, 16

Conread position: 886-1254
Cow position:
Alignm length: 371
Alignm identity: 242
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 26

Conread position: 893-1249
Cow position:
Alignm length: 359
Alignm identity: 234
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 208, 11

Conread position: 893-1256
Cow position:
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 11

Conread position: 893-1262
Cow position:
Alignm length: 371
Alignm identity: 229
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 19

Conread position: 894-1240
Cow position:
Alignm length: 349
Alignm identity: 229
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 15

Conread position: 894-1262
Cow position:
Alignm length: 373
Alignm identity: 235
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 10

Conread position: 898-1149
Cow position:
Alignm length: 253
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 236, 10

Conread position: 898-1193
Cow position:
Alignm length: 297
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 208, 13

Conread position: 898-1234
Cow position:
Alignm length: 337
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 898-1261
Cow position:
Alignm length: 364
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 898-1261
Cow position:
Alignm length: 365
Alignm identity: 222
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 92, 12

Conread position: 898-1308
Cow position:
Alignm length: 415
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 13

Conread position: 899-1128
Cow position:
Alignm length: 237
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 9

Conread position: 899-1161
Cow position:
Alignm length: 264
Alignm identity: 183
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 202, 9

Conread position: 899-1188
Cow position:
Alignm length: 291
Alignm identity: 188
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 159, 10

Conread position: 899-1221
Cow position:
Alignm length: 324
Alignm identity: 214
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 135, 9

Conread position: 899-1222
Cow position:
Alignm length: 327
Alignm identity: 207
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 70, 9

Conread position: 899-1231
Cow position:
Alignm length: 333
Alignm identity: 221
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 12, 0

Conread position: 899-1231
Cow position:
Alignm length: 334
Alignm identity: 223
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 215, 12

Conread position: 899-1234
Cow position:
Alignm length: 339
Alignm identity: 212
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 8, 77

Conread position: 899-1243
Cow position:
Alignm length: 345
Alignm identity: 221
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 12, 0

Conread position: 899-1249
Cow position:
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 899-1250
Cow position:
Alignm length: 356
Alignm identity: 237
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 51, 9

Conread position: 899-1254
Cow position:
Alignm length: 356
Alignm identity: 232
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 8, 0

Conread position: 899-1254
Cow position:
Alignm length: 357
Alignm identity: 226
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 287, 9

Conread position: 899-1254
Cow position:
Alignm length: 359
Alignm identity: 223
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 160, 12

Conread position: 899-1256
Cow position:
Alignm length: 361
Alignm identity: 241
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 197, 9

Conread position: 899-1261
Cow position:
Alignm length: 367
Alignm identity: 238
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 5, 10

Conread position: 899-1262
Cow position:
Alignm length: 365
Alignm identity: 234
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 287, 8

Conread position: 899-1262
Cow position:
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 9

Conread position: 899-1270
Cow position:
Alignm length: 373
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 365, 12

Conread position: 899-1283
Cow position:
Alignm length: 386
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 365, 9

Conread position: 899-1307
Cow position:
Alignm length: 413
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 12

Conread position: 899-1308
Cow position:
Alignm length: 415
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 9

Conread position: 899-1308
Cow position:
Alignm length: 414
Alignm identity: 263
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 206, 12

Conread position: 899-1308
Cow position:
Alignm length: 413
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 12

Conread position: 899-1308
Cow position:
Alignm length: 413
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 9

Conread position: 900-1273
Cow position:
Alignm length: 378
Alignm identity: 238
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 61

Conread position: 900-1285
Cow position:
Alignm length: 388
Alignm identity: 239
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 204, 218

Conread position: 901-1189
Cow position:
Alignm length: 296
Alignm identity: 195
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 9, 67

Conread position: 901-1235
Cow position:
Alignm length: 336
Alignm identity: 210
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 284, 11

Conread position: 901-1257
Cow position:
Alignm length: 360
Alignm identity: 226
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 161

Conread position: 901-1262
Cow position:
Alignm length: 363
Alignm identity: 226
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 12

Conread position: 901-1263
Cow position:
Alignm length: 366
Alignm identity: 236
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 6, 140

Conread position: 902-1231
Cow position:
Alignm length: 334
Alignm identity: 218
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 12, 53

Conread position: 903-1149
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 211, 9

Conread position: 903-1150
Cow position:
Alignm length: 248
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1169
Cow position:
Alignm length: 267
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 903-1192
Cow position:
Alignm length: 292
Alignm identity: 201
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 230, 5

Conread position: 903-1222
Cow position:
Alignm length: 323
Alignm identity: 210
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 66, 5

Conread position: 903-1232
Cow position:
Alignm length: 334
Alignm identity: 223
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 11, 143

Conread position: 903-1232
Cow position:
Alignm length: 330
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1236
Cow position:
Alignm length: 335
Alignm identity: 225
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 66, 5

Conread position: 903-1243
Cow position:
Alignm length: 344
Alignm identity: 228
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 22, 299

Conread position: 903-1254
Cow position:
Alignm length: 356
Alignm identity: 231
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 87, 5

Conread position: 903-1261
Cow position:
Alignm length: 359
Alignm identity: 233
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 9, 0

Conread position: 903-1261
Cow position:
Alignm length: 361
Alignm identity: 240
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 202, 9

Conread position: 903-1262
Cow position:
Alignm length: 361
Alignm identity: 225
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 7, 82

Conread position: 903-1308
Cow position:
Alignm length: 410
Alignm identity: 269
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 361, 5

Conread position: 905-1236
Cow position:
Alignm length: 333
Alignm identity: 215
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 115, 129

Conread position: 905-1261
Cow position:
Alignm length: 357
Alignm identity: 229
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 905-1283
Cow position:
Alignm length: 380
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 365

Conread position: 906-1250
Cow position:
Alignm length: 345
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 906-1262
Cow position:
Alignm length: 362
Alignm identity: 232
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 46

Conread position: 907-1286
Cow position:
Alignm length: 381
Alignm identity: 235
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 192, 211

Conread position: 908-1254
Cow position:
Alignm length: 350
Alignm identity: 233
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 194, 210

Conread position: 912-1103
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 912-1231
Cow position:
Alignm length: 321
Alignm identity: 215
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 106, 118

Conread position: 914-1185
Cow position:
Alignm length: 273
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 188, 13

Conread position: 915-1231
Cow position:
Alignm length: 319
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 8, 0

Conread position: 915-1236
Cow position:
Alignm length: 331
Alignm identity: 219
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 14

Conread position: 918-1234
Cow position:
Alignm length: 317
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 919-1174
Cow position:
Alignm length: 256
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 922-1222
Cow position:
Alignm length: 303
Alignm identity: 190
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 85, 74

Conread position: 923-1307
Cow position:
Alignm length: 387
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 0

Conread position: 924-1250
Cow position:
Alignm length: 327
Alignm identity: 196
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 927-1250
Cow position:
Alignm length: 326
Alignm identity: 199
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 91, 110

Conread position: 927-1261
Cow position:
Alignm length: 337
Alignm identity: 227
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 103, 110

Conread position: 930-1308
Cow position:
Alignm length: 383
Alignm identity: 247
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 36, 48

Conread position: 939-1259
Cow position:
Alignm length: 323
Alignm identity: 218
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 30, 40

Conread position: 948-1249
Cow position:
Alignm length: 302
Alignm identity: 204
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 948-1254
Cow position:
Alignm length: 309
Alignm identity: 212
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 41, 28

Conread position: 951-1261
Cow position:
Alignm length: 315
Alignm identity: 204
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 23

Conread position: 954-1283
Cow position:
Alignm length: 334
Alignm identity: 215
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 21

Conread position: 972-1308
Cow position:
Alignm length: 341
Alignm identity: 212
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 26

Conread position: 974-1250
Cow position:
Alignm length: 280
Alignm identity: 183
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 160, 148

Conread position: 977-1262
Cow position:
Alignm length: 287
Alignm identity: 180
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 208, 226

Conread position: 980-1225
Cow position:
Alignm length: 247
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 206, 215

Conread position: 986-1248
Cow position:
Alignm length: 265
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 118, 132

Conread position: 986-1308
Cow position:
Alignm length: 327
Alignm identity: 209
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 118, 132

Conread position: 987-1262
Cow position:
Alignm length: 279
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 127, 140

Conread position: 988-1308
Cow position:
Alignm length: 325
Alignm identity: 203
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 19

Conread position: 1007-1254
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1029-1308
Cow position:
Alignm length: 286
Alignm identity: 186
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 144, 236

Show alignments to all cow chromosomes.