Cow genome map
| Conread name: | Ss1.1-rspl23_o6.5 |
| Conread position: | 898-1176 |
| Cow position: | chr3:68027510-68027784 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 268, 12 |
| Conread position: | 898-1256 |
| Cow position: | chr3:68046018-68046371 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 221, 7 |
| Conread position: | 899-1183 |
| Cow position: | chr3:62743094-62743372 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 899-1212 |
| Cow position: | chr3:62742692-62743003 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 9 |
| Conread position: | 899-1234 |
| Cow position: | chr3:62721908-62721574 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 899-1254 |
| Cow position: | chr3:62722160-62721806 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 899-1262 |
| Cow position: | chr3:68045934-68046296 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 304, 9 |
| Conread position: | 899-1308 |
| Cow position: | chr3:62722244-62721834 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 375, 15 |
| Conread position: | 900-1232 |
| Cow position: | chr3:68027006-68027337 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 222 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 900-1262 |
| Cow position: | chr3:68027342-68027703 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 286, 8 |
| Conread position: | 900-1262 |
| Cow position: | chr3:77351075-77350721 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 98, 8 |
| Conread position: | 900-1270 |
| Cow position: | chr3:68026921-68027292 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 157, 153 |
| Conread position: | 901-1262 |
| Cow position: | chr3:62722326-62721966 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 11 |
| Conread position: | 902-1254 |
| Cow position: | chr3:62742360-62742710 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 8, 164 |
| Conread position: | 903-1236 |
| Cow position: | chr3:68045854-68046186 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 49, 5 |
| Conread position: | 903-1283 |
| Cow position: | chr3:68027261-68027639 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 903-1283 |
| Cow position: | chr3:68045770-68046148 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 133, 8 |
| Conread position: | 905-1227 |
| Cow position: | chr3:77350910-77350591 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 60, 50 |
| Conread position: | 905-1245 |
| Cow position: | chr3:62721987-62721647 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 297 |
| Conread position: | 905-1308 |
| Cow position: | chr3:62722071-62721666 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 379, 357 |
| Conread position: | 908-1219 |
| Cow position: | chr3:68027433-68027744 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 214 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 211, 205 |
| Conread position: | 911-1193 |
| Cow position: | chr3:68045609-68045891 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 911-1248 |
| Cow position: | chr3:62743184-62743520 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 116, 127 |
| Conread position: | 911-1254 |
| Cow position: | chr3:62742538-62742876 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 271, 103 |
| Conread position: | 912-1308 |
| Cow position: | chr3:62742288-62742682 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 258 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 199, 65 |
| Conread position: | 912-1308 |
| Cow position: | chr3:77351147-77350757 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 39 |
| Conread position: | 917-1249 |
| Cow position: | chr3:68045699-68046031 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 923-1280 |
| Cow position: | chr3:62743033-62743384 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 951-1270 |
| Cow position: | chr3:68045565-68045885 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 106, 102 |
| Conread position: | 957-1147 |
| Cow position: | chr3:16020409-16020219 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 977-1254 |
| Cow position: | chr3:62742269-62742545 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 85, 0 |
Show alignments to all cow chromosomes.