Cow genome map
| Conread name: | Ss1.1-rspl23_o6.5 |
| Conread position: | 878-1249 |
| Cow position: | chr6:49396606-49396975 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 885-1283 |
| Cow position: | chr6:49396445-49396840 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 886-1107 |
| Cow position: | chr6:49396782-49397001 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 899-1111 |
| Cow position: | chr6:49341241-49341451 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 9 |
| Conread position: | 899-1248 |
| Cow position: | chr6:49340569-49340917 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 899-1248 |
| Cow position: | chr6:49340989-49341337 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 899-1254 |
| Cow position: | chr6:49340737-49341091 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 12 |
| Conread position: | 899-1261 |
| Cow position: | chr6:49340653-49341014 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 13 |
| Conread position: | 899-1308 |
| Cow position: | chr6:49340821-49341231 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 12 |
| Conread position: | 900-1179 |
| Cow position: | chr6:49396710-49396989 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 903-1254 |
| Cow position: | chr6:49340405-49340755 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 903-1283 |
| Cow position: | chr6:49340489-49340867 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 210, 5 |
| Conread position: | 904-1257 |
| Cow position: | chr6:49396547-49396899 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 905-1249 |
| Cow position: | chr6:49341078-49341422 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 213 |
| Conread position: | 905-1254 |
| Cow position: | chr6:49340910-49341259 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 908-1234 |
| Cow position: | chr6:49396136-49396456 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 911-1193 |
| Cow position: | chr6:49341168-49341449 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 117, 129 |
| Conread position: | 911-1283 |
| Cow position: | chr6:49396055-49396420 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 202, 176 |
| Conread position: | 924-1283 |
| Cow position: | chr6:49395984-49396336 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 295, 243 |
| Conread position: | 945-1283 |
| Cow position: | chr6:49340362-49340699 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 225 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 316, 0 |
| Conread position: | 971-1178 |
| Cow position: | chr6:49362647-49362854 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 971-1283 |
| Cow position: | chr6:49396277-49396588 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 159, 143 |
| Conread position: | 978-1245 |
| Cow position: | chr6:49362330-49362597 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 56 |
Show alignments to all cow chromosomes.