Cow genome map

Conread name: Ss1.1-rspl23_o6.5

Conread position: 878-1249
Cow position: chr6:49396606-49396975 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 238
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 23, 0

Conread position: 885-1283
Cow position: chr6:49396445-49396840 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 252
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 0

Conread position: 886-1107
Cow position: chr6:49396782-49397001 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 899-1111
Cow position: chr6:49341241-49341451 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 9

Conread position: 899-1248
Cow position: chr6:49340569-49340917 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1248
Cow position: chr6:49340989-49341337 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1254
Cow position: chr6:49340737-49341091 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 12

Conread position: 899-1261
Cow position: chr6:49340653-49341014 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 13

Conread position: 899-1308
Cow position: chr6:49340821-49341231 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 12

Conread position: 900-1179
Cow position: chr6:49396710-49396989 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 903-1254
Cow position: chr6:49340405-49340755 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 0

Conread position: 903-1283
Cow position: chr6:49340489-49340867 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 246
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 210, 5

Conread position: 904-1257
Cow position: chr6:49396547-49396899 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 230
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 8, 0

Conread position: 905-1249
Cow position: chr6:49341078-49341422 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 213

Conread position: 905-1254
Cow position: chr6:49340910-49341259 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 908-1234
Cow position: chr6:49396136-49396456 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 213
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 95, 0

Conread position: 911-1193
Cow position: chr6:49341168-49341449 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 117, 129

Conread position: 911-1283
Cow position: chr6:49396055-49396420 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 227
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 202, 176

Conread position: 924-1283
Cow position: chr6:49395984-49396336 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 223
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 295, 243

Conread position: 945-1283
Cow position: chr6:49340362-49340699 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 225
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 316, 0

Conread position: 971-1178
Cow position: chr6:49362647-49362854 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 136
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 971-1283
Cow position: chr6:49396277-49396588 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 209
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 159, 143

Conread position: 978-1245
Cow position: chr6:49362330-49362597 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 172
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 56

Show alignments to all cow chromosomes.