Cow genome map

Conread name: Ss1.1-rspl23_o6.5

Conread position: 348-573
Cow position: chr7:27245057-27244832 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 44, 36

Conread position: 885-1192
Cow position: chr7:8277242-8277549 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 207
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 9, 28

Conread position: 893-1231
Cow position: chr7:18390406-18390742 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 12, 0

Conread position: 894-1257
Cow position: chr7:8277587-8277950 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 233
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 9, 15

Conread position: 897-1254
Cow position: chr7:1014183-1014540 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 226
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 898-1234
Cow position: chr7:11601191-11600856 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 223
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 10, 0

Conread position: 898-1254
Cow position: chr7:11601276-11600920 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 217
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 41

Conread position: 898-1257
Cow position: chr7:18390074-18390432 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 226
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 134, 9

Conread position: 898-1262
Cow position: chr7:42879195-42878833 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 7

Conread position: 899-1157
Cow position: chr7:8325906-8326167 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 140, 9

Conread position: 899-1164
Cow position: chr7:1015188-1015452 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1177
Cow position: chr7:1438414-1438691 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 182
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 21

Conread position: 899-1185
Cow position: chr7:8324982-8325267 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 184
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 157, 9

Conread position: 899-1185
Cow position: chr7:8325402-8325687 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 68, 9

Conread position: 899-1191
Cow position: chr7:8325150-8325442 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 191
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 235, 9

Conread position: 899-1191
Cow position: chr7:8325822-8326114 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 75, 9

Conread position: 899-1192
Cow position: chr7:8324898-8325190 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 53, 9

Conread position: 899-1233
Cow position: chr7:11600770-11600437 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 13

Conread position: 899-1233
Cow position: chr7:42878607-42878274 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 226
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 216, 9

Conread position: 899-1234
Cow position: chr7:3179946-3180280 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 899-1243
Cow position: chr7:1014852-1015195 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 13

Conread position: 899-1243
Cow position: chr7:42878859-42878516 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 234
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 205, 12

Conread position: 899-1248
Cow position: chr7:1014936-1015284 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 9

Conread position: 899-1248
Cow position: chr7:8242964-8243312 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 233
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 9

Conread position: 899-1249
Cow position: chr7:3180450-3180799 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1249
Cow position: chr7:18390243-18390592 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 227
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 8, 0

Conread position: 899-1254
Cow position: chr7:1015020-1015374 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1254
Cow position: chr7:3180114-3180467 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 899-1254
Cow position: chr7:8242880-8243234 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 216
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 309, 9

Conread position: 899-1254
Cow position: chr7:8243719-8244071 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 226
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 153, 14

Conread position: 899-1254
Cow position: chr7:8277929-8278283 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 234
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 9

Conread position: 899-1254
Cow position: chr7:8324730-8325084 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 234
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 74, 13

Conread position: 899-1258
Cow position: chr7:8278097-8278455 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 234
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 140, 9

Conread position: 899-1259
Cow position: chr7:3179778-3180137 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 9

Conread position: 899-1261
Cow position: chr7:3180198-3180559 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 9

Conread position: 899-1262
Cow position: chr7:1014438-1014794 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 228
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 286, 9

Conread position: 899-1262
Cow position: chr7:3180030-3180392 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 12

Conread position: 899-1307
Cow position: chr7:42878943-42878534 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 9

Conread position: 899-1308
Cow position: chr7:1014768-1015178 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 15

Conread position: 899-1308
Cow position: chr7:3179862-3180272 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 13

Conread position: 900-1243
Cow position: chr7:1014685-1015027 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 11

Conread position: 903-1112
Cow position: chr7:11434486-11434278 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 135, 5

Conread position: 903-1193
Cow position: chr7:18390499-18390788 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 188
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 903-1243
Cow position: chr7:8243385-8243726 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 230
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 7, 48

Conread position: 903-1249
Cow position: chr7:8325490-8325835 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 224
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 125, 5

Conread position: 903-1249
Cow position: chr7:18390163-18390508 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 229
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1254
Cow position: chr7:8277681-8278031 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 5

Conread position: 903-1254
Cow position: chr7:8325574-8325924 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 242
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 51, 5

Conread position: 903-1257
Cow position: chr7:42879107-42878754 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 5

Conread position: 903-1262
Cow position: chr7:42878771-42878413 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1265
Cow position: chr7:3180286-3180644 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 903-1280
Cow position: chr7:11601018-11600643 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 228
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 283, 5

Conread position: 905-1231
Cow position: chr7:1015109-1015435 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 905-1249
Cow position: chr7:1014107-1014451 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 208
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 905-1254
Cow position: chr7:3180371-3180720 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 156

Conread position: 905-1254
Cow position: chr7:8277430-8277779 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 225
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 134, 145

Conread position: 905-1254
Cow position: chr7:8325071-8325420 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 232
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 152, 148

Conread position: 905-1254
Cow position: chr7:11600933-11600584 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 226
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 43, 32

Conread position: 905-1256
Cow position: chr7:1014275-1014626 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 74

Conread position: 905-1257
Cow position: chr7:8325323-8325675 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 228
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 69, 45

Conread position: 905-1308
Cow position: chr7:42879022-42878617 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 221

Conread position: 906-1245
Cow position: chr7:18389997-18390336 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 221
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 129, 136

Conread position: 907-1246
Cow position: chr7:8325745-8326084 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 230
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 37, 55

Conread position: 907-1256
Cow position: chr7:8243139-8243487 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 231
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 25

Conread position: 908-1183
Cow position: chr7:8242804-8243079 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 179
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 37

Conread position: 908-1231
Cow position: chr7:1439475-1439800 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 226
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 202, 113

Conread position: 911-1103
Cow position: chr7:1440066-1440258 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 911-1243
Cow position: chr7:8324825-8325157 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 63, 40

Conread position: 911-1271
Cow position: chr7:1438341-1438702 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 223
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 58, 64

Conread position: 911-1273
Cow position: chr7:1014533-1014890 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 230
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 193, 112

Conread position: 912-1185
Cow position: chr7:1439983-1440256 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 121, 105

Conread position: 912-1185
Cow position: chr7:8277773-8278046 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 116, 134

Conread position: 912-1197
Cow position: chr7:8277521-8277806 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 184
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 129, 123

Conread position: 912-1262
Cow position: chr7:1439817-1440165 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 232
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 274, 43

Conread position: 912-1262
Cow position: chr7:3179706-3180056 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 913-1254
Cow position: chr7:11600841-11600500 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 218
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 273, 288

Conread position: 916-1236
Cow position: chr7:1439904-1440223 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 188, 67

Conread position: 918-1169
Cow position: chr7:42878505-42878251 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 203, 194

Conread position: 918-1261
Cow position: chr7:42879263-42878918 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 237
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 5, 288

Conread position: 953-1308
Cow position: chr7:1438299-1438656 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 228
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 152, 172

Conread position: 971-1254
Cow position: chr7:1014671-1014953 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 188
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 58, 63

Conread position: 971-1262
Cow position: chr7:1439454-1439748 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 196
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 224, 146

Conread position: 972-1192
Cow position: chr7:8243875-8244093 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 66, 91

Conread position: 979-1256
Cow position: chr7:11434824-11434547 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 179
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 55

Conread position: 983-1254
Cow position: chr7:8324729-8325000 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 176
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 202, 212

Conread position: 987-1308
Cow position: chr7:42879276-42878953 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 128, 139

Conread position: 1049-1262
Cow position: chr7:1439448-1439659 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 66, 71

Show alignments to all cow chromosomes.