Cow genome map
| Conread name: | Ss1.1-rspl24_j4.5 |
| Conread position: | 359-515 |
| Cow position: | chr17:28403953-28403790 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 96 |
| Conread position: | 367-533 |
| Cow position: | chr17:485480-485655 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 367-548 |
| Cow position: | chr17:5226430-5226251 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 370-490 |
| Cow position: | chr17:27234358-27234487 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 371-575 |
| Cow position: | chr17:9728954-9729159 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 52 |
| Conread position: | 372-483 |
| Cow position: | chr17:4658482-4658595 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 67 |
| Conread position: | 372-544 |
| Cow position: | chr17:14009234-14009059 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 42, 51 |
| Conread position: | 372-563 |
| Cow position: | chr17:34322565-34322371 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 90, 26 |
| Conread position: | 372-564 |
| Cow position: | chr17:5248550-5248752 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 372-564 |
| Cow position: | chr17:10831087-10830894 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 38, 142 |
| Conread position: | 372-564 |
| Cow position: | chr17:13671281-13671081 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 83 |
| Conread position: | 372-580 |
| Cow position: | chr17:16222238-16222022 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 42, 9 |
| Conread position: | 373-564 |
| Cow position: | chr17:37722728-37722529 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 131 |
| Conread position: | 374-564 |
| Cow position: | chr17:41024792-41024994 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 376-564 |
| Cow position: | chr17:33369920-33369738 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 88 |
| Conread position: | 377-564 |
| Cow position: | chr17:3174954-3175141 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 62 |
| Conread position: | 379-564 |
| Cow position: | chr17:23723963-23724156 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 382-564 |
| Cow position: | chr17:7684022-7684211 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 398-564 |
| Cow position: | chr17:30788488-30788661 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 414-563 |
| Cow position: | chr17:7599810-7599650 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
Show alignments to all cow chromosomes.