Cow genome map
| Conread name: | Ss1.1-rspl24_j4.5 |
| Conread position: | 355-551 |
| Cow position: | chr2:79240867-79240657 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 198 |
| Conread position: | 360-564 |
| Cow position: | chr2:21003375-21003568 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 366-564 |
| Cow position: | chr2:5716433-5716638 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 48, 141 |
| Conread position: | 367-552 |
| Cow position: | chr2:58276678-58276866 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 19, 97 |
| Conread position: | 369-564 |
| Cow position: | chr2:15242919-15242719 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 47, 5 |
| Conread position: | 369-564 |
| Cow position: | chr2:79939289-79939088 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 45, 5 |
| Conread position: | 372-518 |
| Cow position: | chr2:39819745-39819898 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 41, 67 |
| Conread position: | 372-521 |
| Cow position: | chr2:62503013-62503170 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 27, 141 |
| Conread position: | 372-540 |
| Cow position: | chr2:66792569-66792404 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 64 |
| Conread position: | 372-551 |
| Cow position: | chr2:17231470-17231287 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 372-552 |
| Cow position: | chr2:4706266-4706441 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 126 |
| Conread position: | 372-552 |
| Cow position: | chr2:46271272-46271090 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 58 |
| Conread position: | 372-552 |
| Cow position: | chr2:53302092-53301913 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 97, 49 |
| Conread position: | 372-563 |
| Cow position: | chr2:3628104-3627910 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 42, 109 |
| Conread position: | 372-563 |
| Cow position: | chr2:21013950-21014138 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 372-563 |
| Cow position: | chr2:37996685-37996869 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 87, 29 |
| Conread position: | 372-563 |
| Cow position: | chr2:45470873-45471075 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 372-563 |
| Cow position: | chr2:55678821-55679017 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 42, 58 |
| Conread position: | 372-563 |
| Cow position: | chr2:62563612-62563410 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 45, 34 |
| Conread position: | 372-564 |
| Cow position: | chr2:3831656-3831467 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 372-564 |
| Cow position: | chr2:9412354-9412547 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 92, 44 |
| Conread position: | 372-564 |
| Cow position: | chr2:10282732-10282935 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 59, 50 |
| Conread position: | 372-564 |
| Cow position: | chr2:15955735-15955546 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 42, 60 |
| Conread position: | 372-564 |
| Cow position: | chr2:33341591-33341393 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 162 |
| Conread position: | 372-564 |
| Cow position: | chr2:50809385-50809580 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 372-564 |
| Cow position: | chr2:54468980-54468785 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 67, 52 |
| Conread position: | 372-564 |
| Cow position: | chr2:69702146-69701947 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 53, 128 |
| Conread position: | 372-564 |
| Cow position: | chr2:79075633-79075434 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 44, 34 |
| Conread position: | 372-577 |
| Cow position: | chr2:62064360-62064574 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 372-584 |
| Cow position: | chr2:61909563-61909344 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 88, 50 |
| Conread position: | 372-611 |
| Cow position: | chr2:56827824-56827590 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 126, 86 |
| Conread position: | 373-575 |
| Cow position: | chr2:10362845-10362643 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 41, 126 |
| Conread position: | 374-561 |
| Cow position: | chr2:7362070-7362263 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 62, 137 |
| Conread position: | 375-564 |
| Cow position: | chr2:56017834-56017638 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 376-532 |
| Cow position: | chr2:31827655-31827492 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 71 |
| Conread position: | 379-551 |
| Cow position: | chr2:58320681-58320508 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 116 |
| Conread position: | 381-564 |
| Cow position: | chr2:1633463-1633273 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 36, 61 |
| Conread position: | 382-564 |
| Cow position: | chr2:12446693-12446509 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 39, 10 |
| Conread position: | 384-562 |
| Cow position: | chr2:42592511-42592691 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 128 |
| Conread position: | 392-552 |
| Cow position: | chr2:55377826-55377664 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 40, 29 |
| Conread position: | 393-561 |
| Cow position: | chr2:39825570-39825395 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 6, 48 |
| Conread position: | 413-564 |
| Cow position: | chr2:5761261-5761417 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 26 |
Show alignments to all cow chromosomes.