Cow genome map

Conread name: Ss1.1-rspl24_j4.5

Conread position: 349-577
Cow position: chr21:47868495-47868731 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 214

Conread position: 352-563
Cow position: chr21:30644856-30644643 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 70, 22

Conread position: 357-564
Cow position: chr21:18512309-18512524 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 12

Conread position: 360-622
Cow position: chr21:13277583-13277844 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 153

Conread position: 370-561
Cow position: chr21:3808453-3808655 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 72

Conread position: 372-464
Cow position: chr21:14168080-14168175 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 372-538
Cow position: chr21:2014201-2014371 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 42, 149

Conread position: 372-551
Cow position: chr21:18769307-18769124 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 80

Conread position: 372-559
Cow position: chr21:31919722-31919914 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 132

Conread position: 372-561
Cow position: chr21:4775292-4775484 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 94, 41

Conread position: 372-562
Cow position: chr21:10110264-10110463 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 372-564
Cow position: chr21:21180530-21180722 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 66

Conread position: 372-564
Cow position: chr21:26057958-26057755 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 32

Conread position: 372-564
Cow position: chr21:41458320-41458117 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 372-581
Cow position: chr21:31479236-31479449 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 121

Conread position: 373-564
Cow position: chr21:8719198-8719000 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 70

Conread position: 374-496
Cow position: chr21:4012015-4012146 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 374-540
Cow position: chr21:37341720-37341549 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 376-539
Cow position: chr21:5974989-5975159 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 376-558
Cow position: chr21:41430165-41430362 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 183

Conread position: 379-541
Cow position: chr21:32828278-32828113 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 53

Conread position: 379-552
Cow position: chr21:22944881-22945058 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 60

Conread position: 383-561
Cow position: chr21:9202933-9203117 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 385-552
Cow position: chr21:38678204-38678374 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 28

Conread position: 388-564
Cow position: chr21:6711839-6711653 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 113

Conread position: 407-550
Cow position: chr21:17520355-17520209 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 100

Conread position: 426-624
Cow position: chr21:33215764-33215970 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.