Cow genome map
| Conread name: | Ss1.1-rspl24_j4.5 |
| Conread position: | 349-577 |
| Cow position: | chr21:47868495-47868731 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 16, 214 |
| Conread position: | 352-563 |
| Cow position: | chr21:30644856-30644643 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 70, 22 |
| Conread position: | 357-564 |
| Cow position: | chr21:18512309-18512524 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 59, 12 |
| Conread position: | 360-622 |
| Cow position: | chr21:13277583-13277844 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 153 |
| Conread position: | 370-561 |
| Cow position: | chr21:3808453-3808655 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 72 |
| Conread position: | 372-464 |
| Cow position: | chr21:14168080-14168175 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 372-538 |
| Cow position: | chr21:2014201-2014371 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 149 |
| Conread position: | 372-551 |
| Cow position: | chr21:18769307-18769124 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 80 |
| Conread position: | 372-559 |
| Cow position: | chr21:31919722-31919914 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 132 |
| Conread position: | 372-561 |
| Cow position: | chr21:4775292-4775484 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 94, 41 |
| Conread position: | 372-562 |
| Cow position: | chr21:10110264-10110463 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 372-564 |
| Cow position: | chr21:21180530-21180722 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 42, 66 |
| Conread position: | 372-564 |
| Cow position: | chr21:26057958-26057755 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 42, 32 |
| Conread position: | 372-564 |
| Cow position: | chr21:41458320-41458117 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 372-581 |
| Cow position: | chr21:31479236-31479449 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 121 |
| Conread position: | 373-564 |
| Cow position: | chr21:8719198-8719000 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 41, 70 |
| Conread position: | 374-496 |
| Cow position: | chr21:4012015-4012146 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 374-540 |
| Cow position: | chr21:37341720-37341549 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 376-539 |
| Cow position: | chr21:5974989-5975159 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 376-558 |
| Cow position: | chr21:41430165-41430362 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 183 |
| Conread position: | 379-541 |
| Cow position: | chr21:32828278-32828113 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 53 |
| Conread position: | 379-552 |
| Cow position: | chr21:22944881-22945058 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 383-561 |
| Cow position: | chr21:9202933-9203117 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 385-552 |
| Cow position: | chr21:38678204-38678374 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 388-564 |
| Cow position: | chr21:6711839-6711653 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 28, 113 |
| Conread position: | 407-550 |
| Cow position: | chr21:17520355-17520209 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 100 |
| Conread position: | 426-624 |
| Cow position: | chr21:33215764-33215970 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.