Cow genome map
| Conread name: | Ss1.1-rspl24_j4.5 |
| Conread position: | 352-531 |
| Cow position: | chr23:34773734-34773560 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 62, 17 |
| Conread position: | 361-550 |
| Cow position: | chr23:28010673-28010488 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 16 |
| Conread position: | 362-564 |
| Cow position: | chr23:37138516-37138724 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 60, 141 |
| Conread position: | 367-564 |
| Cow position: | chr23:27351050-27350856 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 35 |
| Conread position: | 371-561 |
| Cow position: | chr23:9392595-9392403 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 47, 133 |
| Conread position: | 371-564 |
| Cow position: | chr23:27900452-27900651 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 37, 52 |
| Conread position: | 371-574 |
| Cow position: | chr23:40539018-40538813 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 41, 133 |
| Conread position: | 372-537 |
| Cow position: | chr23:28831648-28831825 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 372-542 |
| Cow position: | chr23:31026206-31026026 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 372-551 |
| Cow position: | chr23:7373467-7373652 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 64, 105 |
| Conread position: | 372-559 |
| Cow position: | chr23:12227363-12227176 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 67 |
| Conread position: | 372-561 |
| Cow position: | chr23:777888-777692 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 67 |
| Conread position: | 372-561 |
| Cow position: | chr23:35383947-35383739 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 372-564 |
| Cow position: | chr23:4602228-4602028 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 42, 111 |
| Conread position: | 372-564 |
| Cow position: | chr23:19913715-19913515 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 41, 76 |
| Conread position: | 372-564 |
| Cow position: | chr23:26184293-26184099 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 88 |
| Conread position: | 372-564 |
| Cow position: | chr23:35324087-35323896 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 59 |
| Conread position: | 372-564 |
| Cow position: | chr23:36217416-36217215 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 42, 151 |
| Conread position: | 372-565 |
| Cow position: | chr23:14276841-14276645 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 161 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 42, 178 |
| Conread position: | 372-568 |
| Cow position: | chr23:13637851-13637647 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 129 |
| Conread position: | 373-552 |
| Cow position: | chr23:11562102-11561922 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 43, 33 |
| Conread position: | 375-552 |
| Cow position: | chr23:40920649-40920834 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 39, 76 |
| Conread position: | 377-552 |
| Cow position: | chr23:35270603-35270781 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 37, 62 |
| Conread position: | 378-565 |
| Cow position: | chr23:18154609-18154803 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 38, 63 |
| Conread position: | 383-562 |
| Cow position: | chr23:19643172-19643359 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 388-518 |
| Cow position: | chr23:1529899-1529761 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 124 |
| Conread position: | 389-552 |
| Cow position: | chr23:13518685-13518512 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 413-564 |
| Cow position: | chr23:11093293-11093452 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 414-552 |
| Cow position: | chr23:7064799-7064664 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 84, 27 |
| Conread position: | 433-666 |
| Cow position: | chr23:30691571-30691340 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 219, 42 |
Show alignments to all cow chromosomes.