Cow genome map
| Conread name: | Ss1.1-rspl24_j4.5 |
| Conread position: | 315-564 |
| Cow position: | chr28:7020408-7020160 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 152, 32 |
| Conread position: | 342-572 |
| Cow position: | chr28:2641982-2642216 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 72, 9 |
| Conread position: | 366-565 |
| Cow position: | chr28:21118311-21118107 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 82 |
| Conread position: | 369-541 |
| Cow position: | chr28:6871328-6871501 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 106, 5 |
| Conread position: | 369-552 |
| Cow position: | chr28:25307034-25307221 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 5 |
| Conread position: | 371-556 |
| Cow position: | chr28:28780105-28780288 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 44, 90 |
| Conread position: | 372-548 |
| Cow position: | chr28:30967770-30967944 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 92, 33 |
| Conread position: | 372-551 |
| Cow position: | chr28:28438634-28438822 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 372-552 |
| Cow position: | chr28:7595307-7595122 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 8 |
| Conread position: | 372-558 |
| Cow position: | chr28:978484-978289 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 372-561 |
| Cow position: | chr28:22242219-22242031 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 88, 17 |
| Conread position: | 372-564 |
| Cow position: | chr28:16613567-16613764 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 42, 131 |
| Conread position: | 372-564 |
| Cow position: | chr28:22202204-22202403 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 44, 83 |
| Conread position: | 372-581 |
| Cow position: | chr28:4375113-4374892 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 373-540 |
| Cow position: | chr28:10574216-10574048 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 64 |
| Conread position: | 373-556 |
| Cow position: | chr28:24330394-24330211 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 72 |
| Conread position: | 373-580 |
| Cow position: | chr28:4110914-4111124 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 374-563 |
| Cow position: | chr28:21941703-21941505 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 167 |
| Conread position: | 374-670 |
| Cow position: | chr28:11690145-11689847 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 40, 118 |
| Conread position: | 375-565 |
| Cow position: | chr28:20252321-20252515 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 39, 23 |
| Conread position: | 377-572 |
| Cow position: | chr28:22051821-22052014 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 62 |
| Conread position: | 381-564 |
| Cow position: | chr28:4404060-4404254 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 399-564 |
| Cow position: | chr28:15993650-15993820 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 98 |
| Conread position: | 419-552 |
| Cow position: | chr28:11819237-11819360 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.