Cow genome map


           Conread name:
           Ss1.1-rspl24_j4.5
        

               Conread position:
               369-564
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               38, 5
               

               Conread position:
               369-564
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               45, 5
               

               Conread position:
               371-564
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 25
               

               Conread position:
               371-566
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               372-531
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               372-539
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               42, 28
               

               Conread position:
               372-551
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               372-552
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               42, 72
               

               Conread position:
               372-559
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               42, 67
               

               Conread position:
               372-561
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               372-561
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               98, 57
               

               Conread position:
               372-563
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               372-564
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               42, 60
               

               Conread position:
               372-564
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               372-564
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               97, 35
               

               Conread position:
               372-564
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               99, 50
               

               Conread position:
               372-564
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               38, 50
               

               Conread position:
               372-564
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 67
               

               Conread position:
               372-564
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               94, 34
               

               Conread position:
               372-564
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               44, 15
               

               Conread position:
               372-564
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               45, 84
               

               Conread position:
               372-571
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               58, 105
               

               Conread position:
               372-575
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 59
               

               Conread position:
               372-600
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               373-535
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               373-552
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               62, 48
               

               Conread position:
               373-552
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               43, 73
               

               Conread position:
               374-532
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 25
               

               Conread position:
               374-533
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               44, 65
               

               Conread position:
               374-541
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               58, 129
               

               Conread position:
               375-557
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               375-561
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               41, 130
               

               Conread position:
               376-561
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               40, 93
               

               Conread position:
               376-564
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               79, 28
               

               Conread position:
               376-564
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               40, 28
               

               Conread position:
               376-564
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               38, 63
               

               Conread position:
               376-565
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               94, 29
               

               Conread position:
               377-562
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               39, 61
               

               Conread position:
               379-561
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               35, 67
               

               Conread position:
               382-554
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               34, 137
               

               Conread position:
               382-562
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               382-570
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               82, 31
               

               Conread position:
               383-569
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               54, 39
               

               Conread position:
               385-580
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               50, 7
               

               Conread position:
               386-552
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               391-564
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               72, 15
               

               Conread position:
               401-560
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 141
               
Show alignments to all cow chromosomes.